Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365792.1:10459186-10464263[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00047 0.05 14.9 1.1 3 21 241 259 239 260 0.94

2 12 0.0021 0.23 12.9 0.8 1 23 270 292 270 292 0.93

3 12 0.00018 0.019 16.2 4.3 2 23 299 320 298 320 0.97

4 12 6.4e-05 0.0068 17.7 0.3 3 23 328 348 326 348 0.96

5 12 1.1e-05 0.0012 20.1 0.5 2 23 358 379 357 379 0.96

6 12 3.4e-05 0.0036 18.5 0.2 2 23 386 407 385 407 0.96

7 12 0.0096 1 10.8 8.9 1 23 413 435 413 435 0.96

8 12 1.8e-09 1.9e-07 32.0 0.7 1 23 441 463 441 463 0.99

9 12 0.00029 0.031 15.6 3.8 1 23 469 491 469 491 0.98

10 12 0.02 2.2 9.8 2.1 1 12 497 508 497 518 0.79

11 12 0.13 14 7.3 3.1 1 23 524 546 524 546 0.90

12 12 2.6e-06 0.00028 22.0 1.4 1 23 552 574 552 574 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00047	0.05	14.9	1.1	3	21	241	259	239	260	0.94
2	12	0.0021	0.23	12.9	0.8	1	23	270	292	270	292	0.93
3	12	0.00018	0.019	16.2	4.3	2	23	299	320	298	320	0.97
4	12	6.4e-05	0.0068	17.7	0.3	3	23	328	348	326	348	0.96
5	12	1.1e-05	0.0012	20.1	0.5	2	23	358	379	357	379	0.96
6	12	3.4e-05	0.0036	18.5	0.2	2	23	386	407	385	407	0.96
7	12	0.0096	1	10.8	8.9	1	23	413	435	413	435	0.96
8	12	1.8e-09	1.9e-07	32.0	0.7	1	23	441	463	441	463	0.99
9	12	0.00029	0.031	15.6	3.8	1	23	469	491	469	491	0.98
10	12	0.02	2.2	9.8	2.1	1	12	497	508	497	518	0.79
11	12	0.13	14	7.3	3.1	1	23	524	546	524	546	0.90
12	12	2.6e-06	0.00028	22.0	1.4	1	23	552	574	552	574	0.98

Sequence Information

Coding Sequence: ATGGAAATTATACCAAATGAAAGTGACTTCGAAAATAAAATACCTCTTAATGCAATTGTAAATGTAAACCAGAACAGATTGATCActgaaaaaaatgaaaatctctTAATTCAAAACTATATGAAATGGACACCAATCAATTCTATTGATGATATAAAGTACCTTTGTCGGATTTGTCTTACCAGTGAAAACAACATGATCTCTTTATTGTCTACTATTGATTCTGAGCTGCTGATGgatatattttcatacattacATCTATAAAAgtTCAGTTAGGAGAAAATGTTCCTCAACAAATTTGTAGTGCTTGTCACAATGACTTGGTACAATGTTATAAACTTCgaataaaatctgttaaaactGATCAGTTGATAAAGAAAATACTAAAGGTAGACAAACAAAGTAGTTGTgaaaatataagttcaAAATTAGAGAAATATGATATGGAGACGCAAACAGATtcaaatgattttattacagaggaagcaagtgatggaaatattaatgaaaacccGTCAGAAGTTAAAGTGGAGTTGAAAATTGAATATGAAGATGGGCATGatGTTGAATATTTGGATGATGAATTCTTTAACACAAATGATAACACATATGCAGATAATGAAAAAGAGAGcGGCGACACGCAAATAAATGATATCAAGTCTTTGCTGAAGGAGGTCAAATCGGTTACAAAAGCAAAAGACAAGAAAAAATTGCtattttgtaacatttgttctaagaaatttcgtaaaataaaaacattaagggCACACATGAAGCAATGCCGCAGTTCAGATTTGAAGAAAGCGTTTCCTTGTGGAAAGTGTAAGGAAACATTTAGTCAAGAACAGGACTTACACATACACTCCGCACTACATACTAAGGGGAGTCAATGGACTTGTAACGAATGTCACAAAGAGTTCTCCGAGCGCAACCGGTTTCGTCGCCACATCCGTCGCCACATGGCGTGCTGGCGGCTGGCGTGCGAGTCCTGCGGGAAGACGTTCGCGGAGCCCTGTGCCCTGCGGAGACACGCGCGCGTCCACACCGGGGAGAGGAGGGAGAAGACGCTCAGCTGCGACACGTGTGACAAACGGTTCAGTGACCGCTCTGCGCTGGCGACGCACGTGTCTCGCCACAGCGGCGTGCTGCCTTGCTCGTGCTCCGTGTGCGGGAAGGCGTTCCCGTCGGCGCGCCTGCTGGCCTCGCACGCCAGGGTGCACTCCGACCTCAAGCCCCACGCCTGCCTCTACTGCGACAAGCGATTCCGTCACGAGTCCACGAGGAACACTCACCACCGCACGCACACCGGTGAGAAGCCGTACGTCTGCTCCGTCTGCGGGAAGACCTTCATTCAGAATTCCAACTTGAGACTCCACATGCGCACGCATACCGGCGAAAAGCCTTATACCTGTAATGAATGCGGTAGCAAGTTTACTTCGAGTTCTTCTCTAACGTGTCACCGTCGCATACACACTGGCGAGAAGCCCTATGAATGTCCGGTCTGCGGAAAGAGGTTCGCCAGAACGCACATCTCTTCTCACCTGCGGTGTCACTCGGGCGAGCGGCCCTTCTCGTGCTGCGCCTGCCCCCGGGCCTTCAGTAGCGCCTCCCGTCTGAAGGACCACTGCCTCGTACACACCGGTGAGAAACCCTTCGAATGCGCGATCTGTTCAGAAAAGTTTCGACGAAAAAATTACTTGGCAAAACATCTTCGAActcataaaactaataaaaatatcgatCCGATGAAAAATCAGGAACTCGTCATACTCCAACGACGAGTACCGTTCCTGATGGACGCCGACGTTATTTACACCAAGAATAATGGCAGCGAAGTAACTTTAGAAGCCGACGTGAACTGTGACAATCAAAATATAACTTTAGAAGTATCCGAGGAAGTTCCTATAGAAGTGTCCGGCGAACTCATCGTACAGGAGGAAGGTGACGAGAACAAGGACCTCGCTGTGAGTGACGATGGACACAGTATCAATTATAACAACGCTGATATATGTAGCGGCGCAGATGTTAATTACGTCAATGATGTTAATTTAGTGCAACTGAATGAAGAAGTTAATGTTTCATCATCGGCTTCGACGGGCGAAGAGAGCGCGATGGAACTTTACAAGTTGGATCAAAGTTTAGTTCAAATACAAACATCGACCGGTCAAGTTACTATCAGAAAAATAACTGGCAAAGTGACTGCCAATTTGtaa
Protein Sequence: MEIIPNESDFENKIPLNAIVNVNQNRLITEKNENLLIQNYMKWTPINSIDDIKYLCRICLTSENNMISLLSTIDSELLMDIFSYITSIKVQLGENVPQQICSACHNDLVQCYKLRIKSVKTDQLIKKILKVDKQSSCENISSKLEKYDMETQTDSNDFITEEASDGNINENPSEVKVELKIEYEDGHDVEYLDDEFFNTNDNTYADNEKESGDTQINDIKSLLKEVKSVTKAKDKKKLLFCNICSKKFRKIKTLRAHMKQCRSSDLKKAFPCGKCKETFSQEQDLHIHSALHTKGSQWTCNECHKEFSERNRFRRHIRRHMACWRLACESCGKTFAEPCALRRHARVHTGERREKTLSCDTCDKRFSDRSALATHVSRHSGVLPCSCSVCGKAFPSARLLASHARVHSDLKPHACLYCDKRFRHESTRNTHHRTHTGEKPYVCSVCGKTFIQNSNLRLHMRTHTGEKPYTCNECGSKFTSSSSLTCHRRIHTGEKPYECPVCGKRFARTHISSHLRCHSGERPFSCCACPRAFSSASRLKDHCLVHTGEKPFECAICSEKFRRKNYLAKHLRTHKTNKNIDPMKNQELVILQRRVPFLMDADVIYTKNNGSEVTLEADVNCDNQNITLEVSEEVPIEVSGELIVQEEGDENKDLAVSDDGHSINYNNADICSGADVNYVNDVNLVQLNEEVNVSSSASTGEESAMELYKLDQSLVQIQTSTGQVTIRKITGKVTANL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01034841;
90% Identity: iTF_01034841;
80% Identity: -