Nina026340.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Napeogenes inachia
Gene Symbol
ZNF296
Assembly
GCA_959347355.1
Location
OY365802.1:21603990-21610711[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0001 0.011 17.0 0.1 3 23 129 149 128 149 0.97
2 17 9.1e-07 9.7e-05 23.5 1.2 1 23 155 177 155 177 0.99
3 17 5.7e-06 0.00061 21.0 2.7 1 23 183 205 183 205 0.99
4 17 2e-05 0.0021 19.3 1.8 1 23 220 242 220 242 0.98
5 17 5.2e-05 0.0055 17.9 3.1 1 23 257 279 257 279 0.98
6 17 3.6e-07 3.8e-05 24.7 1.5 1 23 294 316 294 316 0.99
7 17 0.00016 0.017 16.4 2.8 1 23 322 344 322 344 0.98
8 17 5.5e-06 0.00059 21.0 2.0 1 23 471 493 471 493 0.99
9 17 0.037 3.9 9.0 1.8 1 23 500 522 500 522 0.98
10 17 6.1e-07 6.5e-05 24.0 2.3 1 23 528 550 528 550 0.99
11 17 0.042 4.5 8.8 1.8 1 23 557 579 557 579 0.98
12 17 2.5e-06 0.00027 22.1 1.5 1 23 585 607 585 607 0.99
13 17 0.0009 0.096 14.0 1.0 1 23 614 636 614 636 0.99
14 17 2.8e-06 0.00029 22.0 1.9 1 23 642 664 642 664 0.98
15 17 0.002 0.22 12.9 0.3 1 20 670 689 670 692 0.93
16 17 3.8e-05 0.004 18.4 1.3 2 23 699 720 698 720 0.96
17 17 3.6e-06 0.00038 21.6 1.4 1 23 726 749 726 749 0.97

Sequence Information

Coding Sequence
ATGTTCGAACAGCAAATCAAGGCAGAGCCTATGAGCTTTTACACACATTCACATGTCAACACCGGTCCCCCAACCATAATGCGCTCGGATTCAAACCACGGTATCATCAACATGAATCAACACCATCCCCAAGAAGACTCCAAGGACAGTCTCATACAACAGCAGGTGCAACATCAACAGGAGCTGCTGGAACAGCACCAGCAGGACATGCATCACGACGACGATGTGGATAATTTGAGCTTCAAGGGAATGGACGACGAAGGGGTCGATCTGGACATGGACGGAAGACAATGTTCTCAGGGCATGGTCGTCGACATGGGATCGATCCAAACGAAAATGGAAGTTTCAAACGGCGGTGGAATGCCGCGGTCGAAGCCGCAAGCTTGCAAAGTCTGTGGAAAAGTGTTATCATCCGCCTCCTCATATTACGTTCACATGAAACTTCACTCCGGCAACAAGCCCTTTCAATGCACGGTCTGCGACGCCGCCTTCTGCCGCAAGCCGTACCTGGAGGTGCACATGCGCACGCACACCGGCGAGCGCCCCTTCCAGTGCGACCTGTGCCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAACACGCACAAGCGCGTCCACACCGATGAGCACACGCGCGCCTTGACGGCGAAGGAGCGCCCCTACCAGTGCGAGCTCTGTCTGATGCGCTTCACTCAGAGCTCCAGCCTCAACAGACACAAGAAAATACACACGGAGGAGCACAGACGAGCCCTGTTAGAAAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGTCACGGAAAAATACACACCGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGCGACATCTGTGACAAGCGGTTCACTCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGGCGAGCGGCCCTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGCGTCATGCTTCTTTCCCTTCCGTTGCCCGATCCGTCGACGGCTTCCATCTCGTTGCTTCCGACTAACATCTCGAcctcttttaactttttttcgATTCGCGCTTTTATGTACTTCTGCACTCACCGCCGAATCCTTCCACCTCTATCAGTTTACCGGCCGCATCCCGATCGCACGCCGCGGTAATGCAATCGCCGCAAGGACGCACTCGTGGCGCCTCGGTGTCGATCAAAATTGGGTAAAGCGAGGGACGGCCCGGGGGTGGGGGGGATTGGCGGGGGAGGGGCCCGGGCGCGGCGACGTGCGTTACTCGCTTTTGTGCGCACCCGGCGCGGTGCCGGACATTCACATGCGCACGCACACAGGCGAGCGGCCCTATCAGTGCGACGCGTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAGACGGACGCACACAGTCCAGGGGAGACCGTTCCAGTGCCTGTCGTGTCCGGCCGCCTTCACCTGCAAGCAATATCTGGAGATACACACGCGCACTCACACCGGCGAGCGGCCCTATCAGTGCGACATCTGCCTCAAGCGATTCACACAAAAATCCAGTCTGAACATCCACAAGCGGACGCACTCAGTGCAGGGGCGGCCCTTCCAGTGCCTGCAGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACCGGTGAGCGCCCCTACCAGTGCGACGTTTGCCTCAAGAGATTCGCGCAAAAGTCTACTCTCAACATACACAAGAGAACGCACACAGTGCAAGGGCGGCCCTATCAGTGCACGGAGTGTCCGGCGGCCTTCACTTGCAAGCCCTACCTGGAGATACACACGCGCACGCACACCGGCGAGCGCCCCTTCGAGTGCGACGTCTGTTACAAACGCTTCACGCAGAAATCTACGCTCAACATTCACAAGCGAATCCACACCGGAGAGCGGCCGTACGCATGCGACATTTGCCAAAAGCGGTTCGCGGTAAAGAGCTACGTCACGGCGCACAGATGGTCCCACGTGGCGGACAAGCCGCTCAACTGCGAGCGCTGCTCCATGACCTTCACGTCCAAGTCCCAGTTCGCGCTCCACATCCGCACGCACGCCAGCGGGCCCTGCTACGAGTGCAGCGTGTGCGGGCGCACCTTCGTGAGGGACAGCTACCTCATCCGGCACCACAACCGCGTGCACCGCGAGAACCACAGCAACATCTCCGCGAACAGCATCGGCACCATCAACAGCGTCGCCACCAACACCAACAACTCCGACCACGGCAACTACGACTCGCCGGGCGTCTGCGACCTCAGCTTCGTGCCGATGGTGAACCGCTACATGACGTCTCAGGGCACTCAGGTGTCGATGCAGGACACGCAGACCAAAATGTCCGCCATGTCGCCGCAGTCCATCGCCTCCATATcgTCCCCGCCCCCGCACCCGCCCACGCCGCAGCCGCAGCTGTCCCTGCGCCTGGCCGACTGA
Protein Sequence
MFEQQIKAEPMSFYTHSHVNTGPPTIMRSDSNHGIINMNQHHPQEDSKDSLIQQQVQHQQELLEQHQQDMHHDDDVDNLSFKGMDDEGVDLDMDGRQCSQGMVVDMGSIQTKMEVSNGGGMPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHTRALTAKERPYQCELCLMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTASCFFPFRCPIRRRLPSRCFRLTSRPLLTFFRFALLCTSALTAESFHLYQFTGRIPIARRGNAIAARTHSWRLGVDQNWVKRGTARGWGGLAGEGPGRGDVRYSLLCAPGAVPDIHMRTHTGERPYQCDACLKRFTQKSSLNIHRRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCTECPAAFTCKPYLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSMTFTSKSQFALHIRTHASGPCYECSVCGRTFVRDSYLIRHHNRVHRENHSNISANSIGTINSVATNTNNSDHGNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQTKMSAMSPQSIASISSPPPHPPTPQPQLSLRLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00824939;
90% Identity
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80% Identity
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