Nina028111.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Napeogenes inachia
Gene Symbol
-
Assembly
GCA_959347355.1
Location
OY365803.1:16186459-16197735[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.00016 0.017 16.4 1.1 1 23 47 70 47 70 0.95
2 40 3.6 3.8e+02 2.7 0.4 2 23 96 118 95 118 0.89
3 40 0.05 5.3 8.6 3.5 2 23 142 163 141 163 0.97
4 40 0.00079 0.084 14.2 0.6 1 23 167 189 167 189 0.97
5 40 0.043 4.6 8.8 1.3 1 23 196 219 196 219 0.96
6 40 0.0044 0.47 11.9 1.3 3 23 228 249 226 249 0.95
7 40 9.6e-05 0.01 17.1 0.2 2 23 255 277 254 277 0.95
8 40 0.77 82 4.8 0.6 1 23 283 306 283 306 0.87
9 40 3.3e-05 0.0035 18.6 0.3 1 23 312 335 312 335 0.98
10 40 0.005 0.53 11.7 0.0 1 23 426 449 426 449 0.94
11 40 0.0042 0.45 11.9 0.8 1 23 520 542 520 542 0.96
12 40 0.00039 0.041 15.2 0.3 1 23 546 568 546 568 0.98
13 40 0.036 3.9 9.0 1.1 1 23 573 596 573 596 0.90
14 40 0.0074 0.78 11.2 1.8 2 23 604 626 603 626 0.95
15 40 4.9e-05 0.0053 18.0 0.8 2 23 634 656 633 656 0.97
16 40 0.0036 0.39 12.1 1.5 1 23 661 683 661 683 0.95
17 40 5.4e-05 0.0058 17.9 5.2 1 23 689 711 689 711 0.98
18 40 3 3.2e+02 3.0 0.2 1 9 717 725 717 730 0.87
19 40 0.15 16 7.0 0.9 1 23 791 814 791 814 0.96
20 40 0.00089 0.094 14.1 0.3 2 23 884 905 883 905 0.97
21 40 0.0047 0.5 11.8 0.1 1 23 909 931 909 931 0.98
22 40 0.019 2.1 9.9 0.9 1 23 995 1018 995 1019 0.93
23 40 0.42 44 5.7 0.1 2 23 1045 1067 1044 1067 0.92
24 40 4.5 4.8e+02 2.4 1.2 2 23 1090 1112 1089 1112 0.90
25 40 0.017 1.8 10.1 1.0 1 23 1116 1138 1116 1138 0.94
26 40 0.21 22 6.6 0.7 1 12 1143 1154 1143 1157 0.91
27 40 0.00011 0.011 17.0 2.1 2 23 1204 1226 1204 1226 0.97
28 40 6.4e-05 0.0068 17.7 2.8 1 23 1232 1254 1232 1254 0.97
29 40 9.1e-06 0.00096 20.3 0.6 1 23 1260 1282 1260 1282 0.99
30 40 0.067 7.2 8.2 2.7 1 15 1288 1302 1288 1304 0.88
31 40 2.5 2.6e+02 3.2 0.3 1 23 1364 1387 1364 1387 0.90
32 40 0.42 45 5.6 0.0 2 23 1414 1436 1413 1436 0.96
33 40 0.0056 0.59 11.6 3.1 2 23 1459 1480 1458 1480 0.97
34 40 0.41 44 5.7 0.7 1 17 1484 1500 1484 1506 0.86
35 40 0.032 3.4 9.2 0.8 1 23 1511 1534 1511 1534 0.96
36 40 0.74 78 4.9 4.8 1 23 1541 1564 1541 1564 0.94
37 40 0.002 0.21 13.0 1.0 2 23 1572 1594 1571 1594 0.96
38 40 0.022 2.3 9.7 3.7 1 23 1600 1622 1600 1622 0.96
39 40 0.00015 0.016 16.5 1.8 1 23 1628 1651 1628 1651 0.98
40 40 0.00097 0.1 14.0 1.7 1 23 1657 1680 1657 1680 0.94

Sequence Information

Coding Sequence
ATGGAGGAAAGTGGAGATCCTAATAATGTAACGTATCGCGAAAAGCATCTGCGAGAGATTGAGAAGCAGGGACACAATCTCCTTACCTTACTTAAATATTCTAACGCGACACCGTTCAAGGACAGAAACGACGCTGGATATATGTGCGCATTTTGCTTTAAAAGCTTTCCCGATCCAAATAATCTGAGACAACACACTCGCTTCGATCATATTTCAGAAAAACGAACATATAAAGCTTGTACGATCATAAGTAATTTTGTGGCCTGCTTAGACATAGTCGATTTAAAATGTACGATTTGCGAAATGTCTATGGATAGCATTAAACATCTAAGCGAACATCTCGTCCAGGAACAcgataagatatattataaaagtgtaCGGGATTATTTTCAACCCTTCAAGCTTACTAAGGAGCAGCAGATACAGTGCTGTCTGTGTAACAAAGGCTACCACAATATGAGGTTGCTAATGCAACATATGaatatacattttcgtaattttatttgtactacATGCGGTGCTGGATTTGTGAACAAGTATCGGCTTAGCAGGCACGAAAAATCTCACCTGAAGAAGAAGTCAGTCTTTGCCTGTCGACACTGTGGTCAGGTTTTCGACGCTGAATCCAAAAAGAAAACACATGTAAATACTGAACATAAAGGCATCGAAGGTCACAGTATATGCCAAATTTGTAAAGCTCGATTTAAGAATTACTACCAGAAAACAAGGCATATGATGCAAGTACACAAGAAGGAAGGAATTAAATGTGATATGTGTGAAAAAAGATTTAACCTGAATGCTAATTTGATGCTGCACATGAGGGGTGTACATTTGAATGAGAGGCCCTACGAATGTACGGTTTGCAGCATGGGCTTCCTAACAAACCGCCACATGCTCACACACTACATAGCCGCGCACACAAACGAAAGAAaatataagtgtgatatatgtagtaaggCGTACGCTATTCAAAATAGTTTGAGGAAACATATCAATACCATTCACGGTGTCCAGTCTCAAACAACATTTATCGAAATCGTAATCAAACAAGAACCGATGTCTGACTCGGAACAACCCGAAGATTCTAAACCCGATACAGTTTTCCGTGTAGAACCGGATAAAGTTATAAAGAAAGATAAGGACCCAAAGAAAAGTGCTGCTGACCGAAGATCTAAAAAGGATCAAATCATAGAAATggaaaaacatttaaagaacATTAGCACTATCCTTCTTCACACAAACGCTACTCCGATAAGATATCACGATGGCGCGAATTACGTTTGTGCTCTTTGCCCGGAAACATACCCTATGCCCTCCGATCTTAAAGTTCACGTTTTAGAGGAACATGACGAAATAGACAAAACTTCTTTTATGGAAGGTCATAGACTGACTTCCTATGTTGTGAAACTAGACATAACGGATTTGCGATGCCTGCTTTGCCACAATGATATTGAAAGTTTCGACCCGCTCTTCGATCATCTCAAGTCGGTTCACGGAAAAGAAATGCACACGGATATTCCAAACCACATTTTACCTTTTCGGTTCGTTGGTAACGGTTTTGATTGTGTTGTCTGTCCCAAGTCCTTTGAACATTTCAAACTCGTTCAGGAACACATGACTGTGCATTACAGAAATTACATCTGCGAAACATGTAACGCGCCTTTTGTTAATAAGAGAACTCTTCAAAATCACGCGAACAGACACAAGAAAGGTGATTTTCCCTGCAGTCAGTGTCCAAAAGTCTTTGATACGAATCGAAAGAAATTGAATCATGAGAAATTTGTGCACGCTGGTGATTATAAACGAAAAAAGTGTCCATATTGTCAGGAGAAGTTCACTAATTATGCTAAGAAACGATCTCATATGGTTAAGGAGCATGGCGCTGAGCCGTTATCTGTTAAATGTGATATTTGCAATAAGGTTTTTAGTACACGAGCAAGATTAAGAGGTCACACCCGAAGAGACCACATGGAGTGTCAACACGCCTGTAATAATTGTGAAATGAGGTTTTATACGCAGTTGGAACTAGTTAAACATATGGTTAAGCATTCGCCCCTCAAGGAATATCATTGTGatgtttgtaaaaagtcgtacgCGAGGAAACACACTCTTCGCGAACATATGAAGATACACGCCAATATTCGAAACTTTAAATGTGATATCTGTCACAAAATTAGCAACGTATCGGAAGGCAAAGTAGACAAGTTACTTCCACCACATACAACCAAGAAAAGTACTAAAATGAAGGACTATGAACaggatgtaaataaaataatttgccgAAAGGAAGTGATAAAACATCGCAAAAATGTGATTGAAGTAATACTTAATTCTAATGCGACACCGATACGATGTAAAAATGATCTTGGATACAGCTGTATGTTTTGCACTGATCATTATCCTAACCCTGCAGACTTGAAGAAACACACATTGATGGATCATGATGAAGAAGTCATTATTAAAGTGGTTAATGACATTCGAATGTACACTGTCAAGTTAGATATCACCGGTCTTCAGTGTATTATATGTGACTTTGATATAGAGACTATTGACGATCTATTTCAACATCTTATAAATGCTCACGATCGGACTTTGCATCTGGATATAAAAAATCACATGGTACCGTTCAAGTTTAAAGATGACGAACTAAAATGTGCTGTATGCCCAAATACTTTTGCGAAATTCAGAAATTTGACAGAACATATGAATATACATTTTAGGAATTATGTTTGTGATGTATGTGGCTCTGGATTTGTAAATCGTGATATTTTAAGAAGTCATcttaaaattcatataataggtgCAAGAGACACCAAAACCGTTGTAGTAGAAGACACAAAAATTATACCTAAAATAGAGGATGAAGACAATgaagatataatatatgaaaaaggtGTGGAGTTACAGATGCATCGAACTAATATTCATCAAATATTAATGAACTCGAACGCTACACCGATCCGTTGTTATAAAGGAATCGGTTATGCTTGCAGTTTCTGTATCAAACAATTTCCTAATCCAGGAGATCTTAAAAAACATACCCTAGAATCACATCACGAGAAATGTATGTTCAAGTTTATGAATGGCACCGATTTATACAAGTTTTACGTTAAACTTGACATTACAATGCTTAAATGCTCACTCTGCGATACAAACGTCGATAACTTAGACCAAATGATAACTCATTTGACTGAAAttcataataagaaaatgtataccaaaataaaaaatcaaatactaCCATTTAAATTCGAGACTGAAACTCTGCAATGCTTCATTTGCAAGATgaatatttttaataaatttaaaaagctaaTGGAGCATATGAATATTCATTTTAGTAATTATATCTGTGACATTTGTGATGCCGGTTTCGTAAACAAAAGAAAACTACATTATCATAAAACTGGTCACAGCACTGGAAATTATGCATGTGATAAATGTCCAAAGGTTTTTACCACATACCCACGAAAACGATGTCACGAAAAGCAATACCATGAGAAGGCCAGACTCGTTAACAAATGTGGATACTGCAATGCGTTATTTAAGTGTAATAGACAAAAAGATCAACACCTGGTAAACGAGCATGGAGTTACGTCGTTTGCTAGAAAATGCCAGGCTTGCGATAAAACTTTTGTTCATCAAAATGCGCTACAGATACATATGAAACGATATCACCTGGTGGAGAGACCGCATAAGTGTTCCGAATGCGATAAAGGATTTTTTTCTACCTCTGAGCTCAGAACTCATATGGTGAAGCACACTGGACAGCGTGAATATAAGTGTGAAGTGTGCTTGAAATCGTATGCGAGAAGATGGACCTTGCGCGAACATATGCGCATTCATGCGGACGATCGTAGATTTAAGTGCGAACATTGTGGTCAGACTTTTGTGCAAAAGTGCAGCTGGAGAGGTGTACTTCGTAAAACCctcaaaaaggaaaaaaatcatAAAGACAAGGACTTCGTTCAGAAAGAAGGACTACCCCGAGGTAGACAAGGAGAATTATTAGATAAACATCGAACAAATGTACGCGAAATTATCCAATGGTCGAATGCGACGCCTATTAGATGTCGCGGTGGCATTGGCTATGCATGTTGCTTTTGCGCAGATCAGTTCCCAGATCCGGCTGATTTAAAAACGCATACTATTGAAACACACGACGACAGTACGAAGTCGAATTTCATGAAAGGAAGGGACATGTATGgatattttgtaaaacttgATATCACTGCTTTACAATGCAATCTATGTGGACTTGACATTGAGACATTAGAACAAGTAATGGAACATCTGAGGGTATCCCATGATAAAAATATCAGCACGGATATTTCTAACCATATTTTACCTTTCAAATTTGACAGCGATAATTTGAGATGTTTCATGTGCCATAACATATTCAATAGGTTTAAGGCATTACAAGAACACATGAATACACACTATAGGAATTATGTTTGCGAAGTTTGTGACGCGGGATTTGTGAACCGCCATCTTCTGTTATGTCACAATGAAGGTCATAAAACCGGGACATTTGCATGTGATCAATGTCCCAAAATCTTTGACACATTGAGAAAGAGAAAGTTACATGAACGAAAGATTCACAACGGTTTGAACATGCCACATAAATGCGGATACTGCAATGAAAGGTTCAAAGAAAATTGCTACAAGAATGAGCATCTTGCCAAAGTCCACGGTATTGTGGGTCCGTTGATAAAATGTCAAGCTTGCGAGAAATCATTTTCTTCGCAGCAGACTTGGCTGTTGCATATGAAGAAATATCATTTAATGCAGAGGCAACATAAATGTACGAGATGTGATATGGAATTCTTTTCGAAGAGGGAATTAACGGATCATACTGTTAAGCATACAGGCAGTAGGGAGTACAGGTGTGAAATGTGCTTCAAGTCCTATGGAAGGTTGAAAACGTTGAAAGAACACATAAGACGGTTGCATCCAGAAGACAAAGACTTCAAGTGTGTTCACTGTGGTCAAACGTTTGCAAAATATTTTGCGTTAAACAGTCACTTGCTAGCGAAACATGgagtaaaagtttaa
Protein Sequence
MEESGDPNNVTYREKHLREIEKQGHNLLTLLKYSNATPFKDRNDAGYMCAFCFKSFPDPNNLRQHTRFDHISEKRTYKACTIISNFVACLDIVDLKCTICEMSMDSIKHLSEHLVQEHDKIYYKSVRDYFQPFKLTKEQQIQCCLCNKGYHNMRLLMQHMNIHFRNFICTTCGAGFVNKYRLSRHEKSHLKKKSVFACRHCGQVFDAESKKKTHVNTEHKGIEGHSICQICKARFKNYYQKTRHMMQVHKKEGIKCDMCEKRFNLNANLMLHMRGVHLNERPYECTVCSMGFLTNRHMLTHYIAAHTNERKYKCDICSKAYAIQNSLRKHINTIHGVQSQTTFIEIVIKQEPMSDSEQPEDSKPDTVFRVEPDKVIKKDKDPKKSAADRRSKKDQIIEMEKHLKNISTILLHTNATPIRYHDGANYVCALCPETYPMPSDLKVHVLEEHDEIDKTSFMEGHRLTSYVVKLDITDLRCLLCHNDIESFDPLFDHLKSVHGKEMHTDIPNHILPFRFVGNGFDCVVCPKSFEHFKLVQEHMTVHYRNYICETCNAPFVNKRTLQNHANRHKKGDFPCSQCPKVFDTNRKKLNHEKFVHAGDYKRKKCPYCQEKFTNYAKKRSHMVKEHGAEPLSVKCDICNKVFSTRARLRGHTRRDHMECQHACNNCEMRFYTQLELVKHMVKHSPLKEYHCDVCKKSYARKHTLREHMKIHANIRNFKCDICHKISNVSEGKVDKLLPPHTTKKSTKMKDYEQDVNKIICRKEVIKHRKNVIEVILNSNATPIRCKNDLGYSCMFCTDHYPNPADLKKHTLMDHDEEVIIKVVNDIRMYTVKLDITGLQCIICDFDIETIDDLFQHLINAHDRTLHLDIKNHMVPFKFKDDELKCAVCPNTFAKFRNLTEHMNIHFRNYVCDVCGSGFVNRDILRSHLKIHIIGARDTKTVVVEDTKIIPKIEDEDNEDIIYEKGVELQMHRTNIHQILMNSNATPIRCYKGIGYACSFCIKQFPNPGDLKKHTLESHHEKCMFKFMNGTDLYKFYVKLDITMLKCSLCDTNVDNLDQMITHLTEIHNKKMYTKIKNQILPFKFETETLQCFICKMNIFNKFKKLMEHMNIHFSNYICDICDAGFVNKRKLHYHKTGHSTGNYACDKCPKVFTTYPRKRCHEKQYHEKARLVNKCGYCNALFKCNRQKDQHLVNEHGVTSFARKCQACDKTFVHQNALQIHMKRYHLVERPHKCSECDKGFFSTSELRTHMVKHTGQREYKCEVCLKSYARRWTLREHMRIHADDRRFKCEHCGQTFVQKCSWRGVLRKTLKKEKNHKDKDFVQKEGLPRGRQGELLDKHRTNVREIIQWSNATPIRCRGGIGYACCFCADQFPDPADLKTHTIETHDDSTKSNFMKGRDMYGYFVKLDITALQCNLCGLDIETLEQVMEHLRVSHDKNISTDISNHILPFKFDSDNLRCFMCHNIFNRFKALQEHMNTHYRNYVCEVCDAGFVNRHLLLCHNEGHKTGTFACDQCPKIFDTLRKRKLHERKIHNGLNMPHKCGYCNERFKENCYKNEHLAKVHGIVGPLIKCQACEKSFSSQQTWLLHMKKYHLMQRQHKCTRCDMEFFSKRELTDHTVKHTGSREYRCEMCFKSYGRLKTLKEHIRRLHPEDKDFKCVHCGQTFAKYFALNSHLLAKHGVKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-