Basic Information

Insect: Napeogenes inachia
Gene Symbol: -
Assembly: GCA_959347355.1
Location: OY365791.1:31348502-31358821[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.4e-05 0.0079 17.5 2.2 1 23 404 426 404 426 0.97

2 20 0.016 1.7 10.1 1.3 1 20 432 451 432 454 0.91

3 20 2e-05 0.0022 19.2 5.4 1 23 473 495 473 495 0.98

4 20 0.00017 0.018 16.3 4.7 1 23 501 523 501 523 0.99

5 20 3.3e-05 0.0035 18.6 5.3 1 23 529 551 529 551 0.97

6 20 1.1e-05 0.0011 20.1 7.3 1 23 557 579 557 579 0.97

7 20 6.6e-07 7e-05 23.9 2.9 1 23 585 607 585 607 0.97

8 20 9.4e-05 0.01 17.1 6.7 1 23 613 635 613 635 0.97

9 20 4.1e-05 0.0044 18.3 5.4 1 23 641 663 641 663 0.98

10 20 4.5e-07 4.8e-05 24.4 1.9 1 23 669 691 669 691 0.98

11 20 4.6e-05 0.0049 18.1 7.9 1 23 697 719 697 719 0.98

12 20 5e-05 0.0053 18.0 2.7 1 21 725 745 725 746 0.95

13 20 7e-06 0.00074 20.7 4.3 1 23 765 787 765 787 0.98

14 20 1.8e-05 0.0019 19.4 6.4 1 23 793 815 793 815 0.97

15 20 0.00024 0.025 15.9 6.3 1 23 821 843 821 843 0.97

16 20 2.3e-05 0.0024 19.1 6.1 1 23 849 871 849 871 0.98

17 20 5.2e-05 0.0056 17.9 7.8 1 23 877 899 877 899 0.97

18 20 4e-06 0.00043 21.4 4.1 1 23 905 927 905 927 0.96

19 20 0.00067 0.072 14.4 0.3 1 23 934 956 934 956 0.96

20 20 0.024 2.5 9.6 5.5 1 23 966 988 966 988 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.4e-05	0.0079	17.5	2.2	1	23	404	426	404	426	0.97
2	20	0.016	1.7	10.1	1.3	1	20	432	451	432	454	0.91
3	20	2e-05	0.0022	19.2	5.4	1	23	473	495	473	495	0.98
4	20	0.00017	0.018	16.3	4.7	1	23	501	523	501	523	0.99
5	20	3.3e-05	0.0035	18.6	5.3	1	23	529	551	529	551	0.97
6	20	1.1e-05	0.0011	20.1	7.3	1	23	557	579	557	579	0.97
7	20	6.6e-07	7e-05	23.9	2.9	1	23	585	607	585	607	0.97
8	20	9.4e-05	0.01	17.1	6.7	1	23	613	635	613	635	0.97
9	20	4.1e-05	0.0044	18.3	5.4	1	23	641	663	641	663	0.98
10	20	4.5e-07	4.8e-05	24.4	1.9	1	23	669	691	669	691	0.98
11	20	4.6e-05	0.0049	18.1	7.9	1	23	697	719	697	719	0.98
12	20	5e-05	0.0053	18.0	2.7	1	21	725	745	725	746	0.95
13	20	7e-06	0.00074	20.7	4.3	1	23	765	787	765	787	0.98
14	20	1.8e-05	0.0019	19.4	6.4	1	23	793	815	793	815	0.97
15	20	0.00024	0.025	15.9	6.3	1	23	821	843	821	843	0.97
16	20	2.3e-05	0.0024	19.1	6.1	1	23	849	871	849	871	0.98
17	20	5.2e-05	0.0056	17.9	7.8	1	23	877	899	877	899	0.97
18	20	4e-06	0.00043	21.4	4.1	1	23	905	927	905	927	0.96
19	20	0.00067	0.072	14.4	0.3	1	23	934	956	934	956	0.96
20	20	0.024	2.5	9.6	5.5	1	23	966	988	966	988	0.99

Sequence Information

Coding Sequence: ATGAATTCGGATCTCCATAATATGAATACGGGTGGTGGCCAGCCACCAGGCAATTCTGAGTCTCAATCTCAACGAGTTCAATCATCGCAGCAGCAACAGCAGCAGCAAGCACAATCTAATAATTTAACACCTACAACATCTGCTACAGACTTACGAGTCAATTCAGCGGCAGTAAACGTTGCTTTGTCAAGCGTAGCTAAATACTGGGTGTTCACTAATTTGTTTCCGGGCCCACTACCACAGGTTTCTGTGTATGGTGTGCCCACTGGAACAAGAATTGAAAATGGAAAACCCGTACAGGATCTCGGTCAGGCCCACGCCAGCATACTGAATGGGGACCCCAGTATTATTCTAGGACACGCGGGACAACCTCAGGTCACGGTATCGGCTGCGGGCCAACAGATTCCCGTCTCTCAGATTATCGCAACTCAGTCCGGTCAAGGACACGAGTCGCTGGTGGGcgcgggcggcggcggcggctcaTTGGCGGCCTCGCAGGTACCCAGTCGGGTCGACTTTTTACAACATAACATCGACACATCGATCATGGGCCACCACTCGCAGCAGCACCTCCTGCAGCAGCAGCTGCTGGCGCGCCCCGACCACGCCAACCAACAGATCCAGCTGACCGTGAGCGAAGACGGCATAGTGACGGTGGTCGAGCCGGGAGGAGGCAAGCTGGGAGACAAGGAGGAGCTGCACGAGACCATCAAGATGCCGGCCGACCACACGCTCACCGTGCATCAGCTGCAGCAGATCGTCGGCCACCACCAGGTCATAGACAGCGTGGTGCGCATCGAGCAGGCCACGGGCGAGCCGGCCAACATCCTGGTGACGCAGAACCCGGACGGCACCACCTCCATAGAGACCAGCGCCGCAGACCCGCTGGCCATCAAGGACGAGAAGACCACCAAGATGGACTCCGCTCAGTTCGCCATACCCGCCGACATCAAGGACATCAAGGGGATCGACTTGAAGAGCGCCGTTGGCATGGAGGGCGCCGTGGTCAAGATCTCCACCGGCACCGAGCACGACCTGCACGCCATGTACAAGGTCAACGTCGAGGACCTGTCGCAGCTGCTGGCCTACCACGAGGTGTTTGGGAAATTAAATACCGAAGGACAGCCCCAGGCCAAGGTGATGAGCGAAGCGGAGGCGGAGGCGGGCACCAGCGCGCCCCTAGCCGACGCGGAGACCTCGCCCGGACATCACTCCTGCGACATATGCGGGAAGATATTCCAATTCAGATATCAGCTCATCGTGCACAGGCGCTACCACGGCGAGAGCAAACCGCACGCATGCCAAGTCTGCGGATCTTCGTTCGCCAATCCGGTCGAACTGTCCAAGCATGGAAAGTGTCATCTCGCGGGAGACCCGGCGGAGCGACAGGCCAAGCGCCTGGCCCAGGACAAGCCCTACGCCTGCTCCACCTGCCACAAGACCTTCTCGCGCAAGGAGCACCTCGACAACCACGTGAGGAGCCACACCGGGGAGACGCCCTACAGATGCCAATTCTGCGCGAAGACGTTCACTCGCAAGGAGCACATGGTCAACCACGTACGGAAGCACACGGGAGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACACCGCACCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCCCATACGAACGATACCCCCTTCAGATGCGAACTGTGCGGGAAATCATTCACCAGAAAGGAACACTTCACCAATCACATACTGTGGCACACCGGCGAGACCCCTCACCGGTGCGACTTCTGCTCCAAGACCTTCACCCGCAAGGAGCACTTGCTGAACCACGTGCGCCAACACACGGGCGAGTCTCCCCACCGCTGCAACTACTGCGCCAAGTCGTTCACTCGGCGAGAGCACCTCGTCAACCACGTGCGACAACACACCGGCGAGACGCCCTTCCAGTGCGGGTACTGCCCCAAGGCCTTCACGAGGAAGGATCACCTCGTGAACCACGTGCGCCAGCACACGGGAGAGTCGCCGCACAAGTGTTCCTTCTGCACCAAGTCGTTCACTCGCAAGGAGCACCTCACCAACCACGTGCGCCAACACACGGGCGAGTCGCCGCACCGCTGCGTGTACTGCGCCAAGTCCTTCACCAGGAAGGAGCACCTCACCAACCACGTCAGGTCGGAAGGGTTTGCCGTGTTCTTGATGCATGGAAGGCAGCATACGGGCGAGACTCCTCACAAGTGCACGTACTGCCCGCGCGCGTTCGCTCGCAAGGAACATCTCAACCAGCACGTGAGACAGCACGTGGGCGACTCGCCGCACACCTGCTCCTACTGCCAGAAGACCTTCTCCAGGAAAGAGCACCTCGTTACGCACGTCCGACAACACACCGGTGAGACTCCGTTTAAATGCACGTTCTGCGCCAAGTCGTTCAGTCGCAAGGAACATCTCACCAACCACGTGCATCTCCACACGGGCGAGACGCCGCACAAGTGTGCCTTCTGCACGAAAACGTTCTCCAGAAAGGAACACTTGACTAACCATGTTAGaatACACACTGGTGAATCCCCACATCGTTGTGAGTTTTGTCAAAAGACGTTTACCCGCAAGGAGCATTTGACAAATCACCTCAAACAACATACTGGTGACACTCCTCATGCTTGCAAAGTATGCTCAAAGCCATTCACGAGAAAAGAACATCTTGTTACTCATATGAGATCACACAGCTGCGGGGAGCGGCCGTTTAGTTGTGGGGAATGTGGTAAATCGTTCCCTTTAaagggtaatttattatttcacgaGCGATCTCACAACAAGAGCAACGCCGCCAACAAGTCCTTTCGATGTGAAGTATGCTCTAAGGAGTTCATGTGCAAAGGTCACTTGGTAACCCATCGGCGAACTCACAATGCTAATGAAGCAGCGACAACCGAGCCTGCACCGGAAGTAGACGACTGTGGAGATTACGAGAAGTGCGACAAGGAAGCCGATAGACCCGAACGAAAACATGATATTAGAACATCAGTTGATAACAGAGCTACAGAAACTTCTGTAACAGTAAATCAGCAATCAAATACAACGGTTATGCAAATTTCTAGTCAAGAAGTCCGTACTGGAAATGTGACGAGCGCGGCATCGGTTGCGGGTACCTTCACGCATACCAGCACCCACCACACCGGCTCCATACCACAGCATCCCGTCACTGTCAACTACTAG
Protein Sequence: MNSDLHNMNTGGGQPPGNSESQSQRVQSSQQQQQQQAQSNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGVPTGTRIENGKPVQDLGQAHASILNGDPSIILGHAGQPQVTVSAAGQQIPVSQIIATQSGQGHESLVGAGGGGGSLAASQVPSRVDFLQHNIDTSIMGHHSQQHLLQQQLLARPDHANQQIQLTVSEDGIVTVVEPGGGKLGDKEELHETIKMPADHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLAIKDEKTTKMDSAQFAIPADIKDIKGIDLKSAVGMEGAVVKISTGTEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQPQAKVMSEAEAEAGTSAPLADAETSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPHACQVCGSSFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCVYCAKSFTRKEHLTNHVRSEGFAVFLMHGRQHTGETPHKCTYCPRAFARKEHLNQHVRQHVGDSPHTCSYCQKTFSRKEHLVTHVRQHTGETPFKCTFCAKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSNAANKSFRCEVCSKEFMCKGHLVTHRRTHNANEAATTEPAPEVDDCGDYEKCDKEADRPERKHDIRTSVDNRATETSVTVNQQSNTTVMQISSQEVRTGNVTSAASVAGTFTHTSTHHTGSIPQHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247403;
90% Identity: iTF_00959562;
80% Identity: -