Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_959347355.1
Location
OY365798.1:10361333-10363450[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.37 1.2e+04 -3.2 1.1 72 83 49 60 13 85 0.42
2 3 2.6e-100 8.7e-96 320.9 7.1 1 218 184 393 184 393 0.92
3 3 0.033 1.1e+03 0.2 0.6 47 122 592 638 554 655 0.51

Sequence Information

Coding Sequence
ATGGAAGAAGATAGAGAGAAATGTTTACCTGTGATAAGGGACGAAAAAAGTAGTGATAGTGATGTTAATAGTGAAGACCTTAGTTGTAATATTGAACAAGATCGGATAAGCAACTCTCAGTTTTATGAGAGTAATGATAGTAAGGTAGATTATGCTGTAAAGTTAGATGACAATGATACTTTAAGTGACATTGATGATATTAAGACAGATACTGCATCAGCAGATAGTGAGGATTCGGCTCTTGGTAGCCTTCCACCCGACTCCGCTCTTACTGACAGAGAAGAATATACTCAGGACAGATCAGATGGAAGTGACTCTGGACTTGGTTCAGAGTCAACAGATGAAGCAAAATTACCCACGTTCAACCTACAATGCAATAGTGAAGAAAGGAGTACAACACCAGAAAATCTACCAATAAATGAAGATCTTGATTTAGCTATCCATAacaatgaagaaaataaaaaatctgataCGTTCATCCAGAAGCCCCAGAAAAGTAATCTTAAAAGAAAACACGATTTCGATTGCAATAATGAACCTTCattaaaaaagcaaaaacacaacatacattttgataatatcaCAGTGTTTTATTTTCCAAGAGCACAAGGGTTTACATGTGTGCCTTCTCAAGGAGGCTCTACCTTAGGGATGGAATGGGAACACAGCCATGTACAAACGTTCACTTTAACAGAACATGCACTAGAGCAAAGACGATTACACAGACAGGTTTTACAGCAGTTAAAAACTGAGCGTCATAATTTGCAAGGAGTTTCGTTATCATCAAGTGAGGACAGTGACACTGAAGAAGAAACGAGTGACATATCCGAATCAGAATTAGACTTAGATAGCTATTATTTCTTGCAACCAGTACTTACCAAACAAAGAAGGGCGTTGCTAAGAGCAGCTGGTGTACGGAAAATAGAAGGTTATGAAAAAGATGAATGTAGGGACATAAGGACATCTCGTGAATTTTGTGGTTGTGCTTGTAAAGGTATATGTAATCCTGAAAGTTGCCTTTGCAGTATCTCTGGCATAAAATGCCAAGTTGATAGACTAAACTTCCCTTGTGGTTGTACCAGGGACGGTTGTGGCAATACTACTGGTAGAATAGAATTTAACCCCATGAGAGTGAGaactcattttataaatactttgatgAGAATAGGCCTAGAAAAAAAGAATGAAGAAGCACAAGAGGCCGTAAAAAGAAAATGGGCCGAAGTGCACAATCTTTCTTCCACATGTGTTTCAAATTCACCGTACGAGAAAGAAAATTGCCATAGTCAAGGAAACCACTTGACGTCACATATGAATGTACCTCCTaggataaatatagaatcatgTGTGGACCCcactagttttaataatatacaccaCAATATGAATAGTATCCCTAGTAATAATCAAAACGATTTATCATATAGTTTTAGAAATGAACCTATAGATCATAGaatcataaaatcaaatatgATGAACTTTCAAGAAAAATTAGATCACGGTAACAATGATTATACGTCCAACATGCTCCAAGGAAAAGGTTCACCTTATTCATCTACCGGAATGGATTACAACATGTCCAATAATATGCAAAGATATCCAGATCTCAATTATTCATATGACCAACAACACTCAGATGGTCATCTGTTTAAGGGAATTCATAGTTTCCCGGCATCGACATTTGAAGAATTTGCACACAATTCCCAGATGTCGATGCTTAATCATTATGGACATATGTACGTTCCGGAATACTTGCACAAACCGAGCACGAGCATGTCTGATCACAACATGCAGTATCAAATGATGCAACAAAATCATTATGAAATGTACAAAAACACAGAAACTGTAAATATGGATAATAAATCAGACACCAACTATACTACCTTACTATCAATGCCATATCAACAAAACAATAAGTTGCAAGCTGTAGAAAATGATGAAAATTGGTTTAGTCATAATACTCTTTTAAACTTAGACCACTCCGTTCAAGTACCACAAGAAGTCCCTGTTGAACATTCTGAAGTCGCACCAGCATCTGTCGAGGTTGATAACAGTGATGCTACAGAGAACTTTGgtgaacttattaaaaaaactatggtAGAATCTGTTACAGTGTAG
Protein Sequence
MEEDREKCLPVIRDEKSSDSDVNSEDLSCNIEQDRISNSQFYESNDSKVDYAVKLDDNDTLSDIDDIKTDTASADSEDSALGSLPPDSALTDREEYTQDRSDGSDSGLGSESTDEAKLPTFNLQCNSEERSTTPENLPINEDLDLAIHNNEENKKSDTFIQKPQKSNLKRKHDFDCNNEPSLKKQKHNIHFDNITVFYFPRAQGFTCVPSQGGSTLGMEWEHSHVQTFTLTEHALEQRRLHRQVLQQLKTERHNLQGVSLSSSEDSDTEEETSDISESELDLDSYYFLQPVLTKQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGICNPESCLCSISGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPMRVRTHFINTLMRIGLEKKNEEAQEAVKRKWAEVHNLSSTCVSNSPYEKENCHSQGNHLTSHMNVPPRINIESCVDPTSFNNIHHNMNSIPSNNQNDLSYSFRNEPIDHRIIKSNMMNFQEKLDHGNNDYTSNMLQGKGSPYSSTGMDYNMSNNMQRYPDLNYSYDQQHSDGHLFKGIHSFPASTFEEFAHNSQMSMLNHYGHMYVPEYLHKPSTSMSDHNMQYQMMQQNHYEMYKNTETVNMDNKSDTNYTTLLSMPYQQNNKLQAVENDENWFSHNTLLNLDHSVQVPQEVPVEHSEVAPASVEVDNSDATENFGELIKKTMVESVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2