Nina005615.1
Basic Information
- Insect
- Napeogenes inachia
- Gene Symbol
- clz9
- Assembly
- GCA_959347355.1
- Location
- OY365793.1:5943895-5945948[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-07 0.00014 22.4 0.0 2 38 17 53 16 57 0.90
Sequence Information
- Coding Sequence
- ATGCCGCGAATATATGTGAAAAAGGGTACTAGAACGGGAGAAGTAAACGAAGAGGATGTACAATCTGCGATGaatgaagttttaaataagACTTTGTCTATTAGAAAATCGGCACAAAAATACGGCATCAAACCAACAACACTTCAAAGTCGcttaaacaactttaaaaaaaaggctGCAGCTGAAAATGATGGTAACCATAGTTCATTGCGTATATATAGTTCCAAGTTCACGTCTAATCAAGTGTTTACTACAGAAGAAGAgactttattgaatatttacatCGCAAAATGTTCCAAGATGCATTATGGATTGACTATAATACAAGTAAGGAAACTGGCGTACGAATTCGCAACAGTAAACCAGCTGCGTTTTCCACCTAGCTGgaatcaaaacaaaatggcaGGTAAAGAATGGCTGGATAGTTATCGACGGCGAAACGTGAATCTAAGTCTACGGAAACCAGAAAATACGAGTGCAGCTCGATCTTATGCGTTCAACAAGACAGCAGTCAATGATTTCTACGAAAACTTAGAAAGGGTATTGACTAAATATGCATTCACTGCAGAtcgaatatataattttgacgAGTCAGGTATATCCACGGTCTTGAGCACGCCAAAGGTACTAGCtgagaaaaatttaaaacaaattggtCAACTTGTATCGGCAGAGAGAGGTGAACTGGTAACGTTCGGAGGAATTATTTCAGCAAGTGGTAACACAGTCCCGCCATTGTACATTTTTCCCAGGGTTCATTTCAAGGATCATTTTATAGAAGGTGCACCAGAGGGTAGCCTAGGAATGGCTACTAAGAGTGATAATCCAATTCTCCTGCTAGTCGACAATCACGAAAGCCACGTTACAATAGAAGCGGTAGATTATGCACGTGATAAcggtattatttatatgtcatttCCTCCCCACACGACACACCGTCTTCAGCCGTTAGACGTTGGTGTATTTGGACCTTTTAAAGCTAAATTAAAGATAGCATTTAATGACTGGCACGTGAATAACCCGGGAAAAACTCTAAATATATACAACATTCCGAAACTAGCCAAGATTGCCTATTTTGAATCATTTAATAGCAAAAACATTTCCAATGCTTTTGAAAAAACTGGTATATggccttttaataaattaaaattcagtgATGAAGAATTTGAAGCCGTGCAAGTCTACCACACCGATTCTGCAGTAGGTCTAAATGATACCATGCAACAAATTGTACCTGAAGAAACAAATCTTACTCAACAAGATCTATCATCGATATTGTCACCATCACCAGTATTACCGAGTACATCATCGGTGGGATTAATTACGCCTGAAATTGTCCGACCTTACCCTGAAGTGGACAAAAATACGACTAGAAAGAAGAAAAAAGGTAAAGTGCCTGGAAAATCACGGATATATACAGATACTCCCGAAAAGAATAGActaatagaaatagaaaaagccaaagaattaaagaaaaaggaacaagagAGAAAACAGATGGCTAAAGAGATGAAACGTACATTAAATTTACTAtcagatataaataaagaagCTAAACCaaagaaacaaaagaaaatttcaGAGGCTGAGACTGATAACGATGAGACTGACATAAGTTTGAGAGAAAGCTCTTGTTCACCCTTTGATGACAGATCAGTAGGATCTGATGTGGAGAACGAAATTCCAGTTTTGACCGAAAACATTAAAGAAGAAAGCTTTCTGTTAGTGAAATTCGAAAAAAAGAAGACAGTTTTACATTATATTGGACTGGTGATAGCCAAATATAGCCCAACTGAATATAAAGTTTCATTTTTGAGAAAGAAGCCTGGAACCTGGAAATTTGTTTTTCCTAATAATAAAGATGAAGGAACCGTTTATTTATCAGACGTGGTCTGTGTACTTCCGCCGCCTAAATCTGCTTTTACAGCAAGAACAGCTGATATACTGAGTTTTGAAAAAGATCTCACAATGTATAACGTGCAATAA
- Protein Sequence
- MPRIYVKKGTRTGEVNEEDVQSAMNEVLNKTLSIRKSAQKYGIKPTTLQSRLNNFKKKAAAENDGNHSSLRIYSSKFTSNQVFTTEEETLLNIYIAKCSKMHYGLTIIQVRKLAYEFATVNQLRFPPSWNQNKMAGKEWLDSYRRRNVNLSLRKPENTSAARSYAFNKTAVNDFYENLERVLTKYAFTADRIYNFDESGISTVLSTPKVLAEKNLKQIGQLVSAERGELVTFGGIISASGNTVPPLYIFPRVHFKDHFIEGAPEGSLGMATKSDNPILLLVDNHESHVTIEAVDYARDNGIIYMSFPPHTTHRLQPLDVGVFGPFKAKLKIAFNDWHVNNPGKTLNIYNIPKLAKIAYFESFNSKNISNAFEKTGIWPFNKLKFSDEEFEAVQVYHTDSAVGLNDTMQQIVPEETNLTQQDLSSILSPSPVLPSTSSVGLITPEIVRPYPEVDKNTTRKKKKGKVPGKSRIYTDTPEKNRLIEIEKAKELKKKEQERKQMAKEMKRTLNLLSDINKEAKPKKQKKISEAETDNDETDISLRESSCSPFDDRSVGSDVENEIPVLTENIKEESFLLVKFEKKKTVLHYIGLVIAKYSPTEYKVSFLRKKPGTWKFVFPNNKDEGTVYLSDVVCVLPPPKSAFTARTADILSFEKDLTMYNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00842607;
- 90% Identity
- iTF_01034534;
- 80% Identity
- -