Nina013824.1
Basic Information
- Insect
- Napeogenes inachia
- Gene Symbol
- -
- Assembly
- GCA_959347355.1
- Location
- OY365796.1:23239913-23241130[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-13 3.1e-10 40.4 0.0 2 42 11 51 10 54 0.92
Sequence Information
- Coding Sequence
- ATGGCGAAGAGACAGTATAATACTTGGAAGCAAGAGGATATGAATGAAGCTTTGGAAAAACATCGTAATGGAGAAATTGGGTTTAATGAAGCTTGTAGAAGATTTAATATACCAAAGCCTACCCTGCGACGTCATTTGAAaggattaaataaaacaaaaaaattcgGACGACCTAATGATATGACTCCAGAAATGGAAGAAGTATTAGCACAGCATTTGATTAACTTGGACTCGTGTTTCTTTGGACTAACCACTACTGAGTTCAGGAAACTTGCCTTCGAGCTTGCTGAAAAATTCCAAATACCTCATCGTTTTAATAAAGACAATAAAATAGCAGGTAAAAAGTGGTATTTCAGATTTATGAAAGAGCATCCTGATTTGTCCTTGCGTGTTCCAGAACCAACATCGATGGCCAGAAGTAAAGGGTTTAATAAAGAACGCgttaatgatttttttgacAAGTACGAAGAAATATTAGATAAATACAAATTTGCTGcacatgaaatatataatatggatGAAACTGCACTATCTACCGTTCATAAGCCTTCCAAAGTTATTGCTCAAAAGGGTAAACATCAAGTAGGTGCAGTCACAAGTGGAGAAAGGGGCTTGACCACAACTTGCGTATGCGCAATGAATGCAGCAGGAGAATATTTACCAcctatgttaatatttaagcGCAGTAGACTAAATGATGCCTTAAAAAATGGAGCTCCGCCAAACACAGCATTTGGATGTTCAAAGAACGGTTGGATAACATCAGAACTTTTTGTTAATTGGCTCCAACATTTTATCAAGTGCAAGAAATTAGAAAAAGGTGATCGAAAACAAACATTGCTTCTTCTTGATGGTCACAGCACACACACTAAAAATCTAGAAGCGATCCAGATAGCTCGTGACCATGGCATAGTAATGCTTTCTTTTCCTGCTCACACAACGCATCGCCTACAGCCGCTAGATAGATCCTTTTTTAAATCATTGAAAAGCTCTTACAATGACGCTGCAACAACGTGGCTCCGCTCAAATCCTGGCAGTGTCATAAAACAAGCTAATGTTGCAGAGCTGCTCGGAAAAGCATATCCTAGGTCAGCTCGCATGGATATTGCCTTAAATGGTTTTAGAGGAACAGGATTATGGCCTTGTGACAGAAATGTACTCAAAGAAGAGGATTTTGTAGCTTCTTTGTATGTGTCTCTAATCCATCAAATGCAGTAG
- Protein Sequence
- MAKRQYNTWKQEDMNEALEKHRNGEIGFNEACRRFNIPKPTLRRHLKGLNKTKKFGRPNDMTPEMEEVLAQHLINLDSCFFGLTTTEFRKLAFELAEKFQIPHRFNKDNKIAGKKWYFRFMKEHPDLSLRVPEPTSMARSKGFNKERVNDFFDKYEEILDKYKFAAHEIYNMDETALSTVHKPSKVIAQKGKHQVGAVTSGERGLTTTCVCAMNAAGEYLPPMLIFKRSRLNDALKNGAPPNTAFGCSKNGWITSELFVNWLQHFIKCKKLEKGDRKQTLLLLDGHSTHTKNLEAIQIARDHGIVMLSFPAHTTHRLQPLDRSFFKSLKSSYNDAATTWLRSNPGSVIKQANVAELLGKAYPRSARMDIALNGFRGTGLWPCDRNVLKEEDFVASLYVSLIHQMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01294936;
- 90% Identity
- iTF_01034468; iTF_01034470; iTF_01034471;
- 80% Identity
- -