Basic Information

Gene Symbol
Xbp1
Assembly
GCA_959347355.1
Location
OY365794.1:23524854-23526219[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.9e-18 1.1e-14 55.0 2.6 2 52 44 94 44 96 0.97
2 2 6.5e-05 0.091 13.7 0.8 33 56 89 112 89 117 0.89

Sequence Information

Coding Sequence
ATGAGCACTCCGATAATTATAACGGTACCCAATAATTATCTGGCGGTGGACGATATGGAGTCAAAAGTTATTGTCGATGTTTCTCCTAGTCCACCGTCCAGAAAAAGGAGGTTAGACCATCTTACTTGGGAGGAGAAGATGCAAAGAAAGAAGCTAAAGAATAGAGTAGCAGCCCAGACCTCAAGAGATCGTAAAAAAGCTAAAATGGATGAAATGGAGGGCCATATACAGCACTTCATAGACATGAACAAGCGGCTCCTGAGCGAGGTAGAGAGTTTGAAAGCGTTGAACGAGCGACTTTTGAGTGAGAACGCATCCCTGCGCGAGGCAGCGAGGAGCGTCACGGCGGCCCCGAGACCAGCGGAGTCTCATCCTCAGCAGAAGgAGGGGCCCCCGCCGGCGCTCCCCGCGCTTCGCCTGCTGATGGCGATGTATGTAATCTCTCAGAATTGCTCGAGCACCTGGACTCCCCCGAATACCTGGACACACTGCACCAACTTGCAGACCAACTACTCCAAGAAATCGATGGCAATGCTGTGGGAGAAAATAAAGATGACAAAGCCACCAGCATTACAAAATGCCTTGAAGGAGCTGAAATGGTGGGGCCCACAACAAAGCAACTGGAATCCAGTCAAAGTGGAGTCGTAG
Protein Sequence
MSTPIIITVPNNYLAVDDMESKVIVDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEGHIQHFIDMNKRLLSEVESLKALNERLLSENASLREAARSVTAAPRPAESHPQQKEGPPPALPALRLLMAMYVISQNCSSTWTPPNTWTHCTNLQTNYSKKSMAMLWEKIKMTKPPALQNALKELKWWGPQQSNWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01034276;
90% Identity
iTF_01034276;
80% Identity
iTF_01034276;