Mcer015374.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- clz9
- Assembly
- None
- Location
- Mc10424:14489-16601[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-08 3.1e-05 24.2 0.0 1 39 21 59 21 63 0.91
Sequence Information
- Coding Sequence
- ATGGGTAAAATCAAAAAATCTTTACAAAGTCAAGGTGTAAGAAGAAAGTTGTTTCAATATTCGCCTACAAAAATTCAACTGGCATTAAATGCTGTTAAAGATGGTTCTTTAAATGTACTTCAGGCCAGCAAAATGTATAAAGTCCCTAGATCTACTCTACGCAATAAATTGAGTGGAAAATCTCCAGATAGTGTCCATCAAGTCGGCCCTAAAGCAGTATTAGGTGAAGAAACTGAGGCAAAACTGGTAAATTGGATTCTTACCGTCGCTAAAATGGGGTTTCCTATCAATAAATTAATGTTGTTGGATACCGTCGAAAAAATTGTGACTTCAGCTAAAGATAGCATGAGTACGCCTTTTATAGATGGTAGACCAGGAAGAAAGTGGTTTGAAGGTTTCATGCGCCGACACAGTGAAATCAGTCAAAAGCAATCTGAATACATCAATAAAGCACGAGGCCAAATCACTGAAGCTAAAATTAGAGGTTGGTTTAAAGAGACTGAAGATTTGTTAGGTCCAGACTTAGATATATTAAAAGATCCTACAAGAGTTTTCAATTTAGATGAAACGTCATTTTATCTGTACCCAAAAGGATATTTGGTTTTGGCAGAAAAGGGTACCCATGTGTATGACACATCAGCTAAATCTGATAAGGAAAACATTACAACATTATTAACTGTAAGTGCTGCTGGTGTTATTGCCCCGCCATTAACAATATACAAATATAAAAGAATGAATCAAGAAATAGCCAATTCTGCCCCAAGCTATTGGGGCCTTGGGAAAACTGATAGTGGATGGATGACGGGAGAAGCATTTTTTGAATATTTCAGTAATGTATTTCACCCTTATTTGATAAAAAATAATGTAGAACTTCCGGTTATTGTGTTTTTAGATGGACATGCATCACATTTAACCATGCATTTGGGTGACTTTTGCAAAAGTAATACAATTATTCTAATATGTTTATTTCCAAATACAACCCATATTTTAAAGCCTTTGGACGTAGCCGTTTTTGCTCCATTAAAATCCAAGTGGAAAAGTGTTGTACGTCAATGGCGAATGGATCATGATGGTAGGGAAATAAGTAAACATAATGTACCTTCACTGCTGCATAATATTCTTGATAATGGTGATTTTCAACGATCAATTAAGTCAGGTTTTCGGGTTTGTGGACTTTACCCTTGGAACCCTGATGCAGTAGACTATACAAAATGTACTCTAAAAGACATTCCAACTGTTATAACATCTCCATCTGCTGTATTAACACATTTAGAGTACTTGGAAAAAATAATATCTCCTGACAGACTTACTGAATTTAAAGACACACTAAAGAGGAACACTGATTGGGAGGGGGATATTTCTGCATCAGAACTTTATGATGTTTGGGTAAAATGTTTTCAAAGTGAGGAAAATCAAGATCAACCAGAAGTTTGTCCAAATATATCTCTTTCTGAAAATAATTCTTCGATAAGTCCATTGCAACATGTAGCTGTAGAACCAAACAGAACAATAATTACACCATCTACAGGCTCTATTAAAAATTTAAATGAAGTTTTGGCTGATGTTATAAAATGGCCAGAACCTATATCAACAACAACTAGAGCTTATAATAGAGTAAAGATGCCCAGTGTTGTAACTTCAGAAAAATGGCTTGAAATAAAAAAGGCACAAGATGATGAAAAGCAGCAAAAAATAATGAATAAACTTAATAAAAAAAATAAGACCTTGGAAAAAAAAATTGAATCTGATTGTGAAGATGAAGTGCCTTTTGCTTCGGATAGTGACGGTATTAGTTATCATGACTTAGAAGATGAATACAACATTGGTGACTTTGTCATTGTTAAATATGAAGACGAATTTTTTCCTGGTGTAATTAATGATACAAGTCCTACATCAGCGTTAGTAAGTGTTATGTCAATGAGTGGATCAGGATGGAAATGGCCAGATGTAGAAGATGAAATTTGGTATACTCATGAGAATGTGATACAACTAATCAAGCCTCCTGAAGTATCAAATTCTAGAGGGATTTGTTGTGTTCCAGAAATTCAAAAATATAGAAAGTTCTAA
- Protein Sequence
- MGKIKKSLQSQGVRRKLFQYSPTKIQLALNAVKDGSLNVLQASKMYKVPRSTLRNKLSGKSPDSVHQVGPKAVLGEETEAKLVNWILTVAKMGFPINKLMLLDTVEKIVTSAKDSMSTPFIDGRPGRKWFEGFMRRHSEISQKQSEYINKARGQITEAKIRGWFKETEDLLGPDLDILKDPTRVFNLDETSFYLYPKGYLVLAEKGTHVYDTSAKSDKENITTLLTVSAAGVIAPPLTIYKYKRMNQEIANSAPSYWGLGKTDSGWMTGEAFFEYFSNVFHPYLIKNNVELPVIVFLDGHASHLTMHLGDFCKSNTIILICLFPNTTHILKPLDVAVFAPLKSKWKSVVRQWRMDHDGREISKHNVPSLLHNILDNGDFQRSIKSGFRVCGLYPWNPDAVDYTKCTLKDIPTVITSPSAVLTHLEYLEKIISPDRLTEFKDTLKRNTDWEGDISASELYDVWVKCFQSEENQDQPEVCPNISLSENNSSISPLQHVAVEPNRTIITPSTGSIKNLNEVLADVIKWPEPISTTTRAYNRVKMPSVVTSEKWLEIKKAQDDEKQQKIMNKLNKKNKTLEKKIESDCEDEVPFASDSDGISYHDLEDEYNIGDFVIVKYEDEFFPGVINDTSPTSALVSVMSMSGSGWKWPDVEDEIWYTHENVIQLIKPPEVSNSRGICCVPEIQKYRKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037694;
- 90% Identity
- iTF_01037683;
- 80% Identity
- -