Mcer021859.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- -
- Assembly
- None
- Location
- Mc2390:5058-7299[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-08 3.6e-05 24.0 0.0 5 38 22 55 21 60 0.88 2 2 8.6 6.2e+03 -2.4 0.0 21 29 298 306 298 307 0.88
Sequence Information
- Coding Sequence
- ATGCCCAATCAATATAATCCAGAACCTCGGAGCAACCGTTATAAAGTTCCAAATAAATGTGATCTAGCAAATGCTGTTATGTGTATTAAGCAAAAAAAAATGTCGTACCGAGAGGCTGCAAAAGTATATGGTATTCACCATTCTGTGATATACAGACATGTAAAGAATCCACAAATAAAGAAACAAGGCGGACAAACTTCACTCACAAAACAGGAAGAGGATTTAATAATTGCAGGTATTTTACTGTGTTCTGAATGGGGATATCCATTTGATAAATTTGATGTTAGACTATTAGTTAAAGGGTATCTAGATCGTAGGGGTAAAAAAATTAATAAGTTTAAAAATGGAAATATGCCAGGACGGGATTGGGTCAATAGTTTTTTGAAAAGGAACAAAGACATTTTAGCTGTAAGAATGTGCCAAAACATAAAACAATCTCGTGCTGGTATATCAAGAATCACAATATCTGAATATTTTGATAAACTTGAAATTTCTTTGGATGGAGTACCTCCTAGTAATATTTTAAACTATGATGAGACAAACCTAACCGACGATCCTGGGCGCAAAAAAATTATAACAAAACGAGGTACTAAATATCCAGAACGTATAATGAACCATAGTAAGACTTCAAATTCAATAATGTTTGCTGGATCAGCTGATGGAACCCTTTTACCACCTTATACAGTTTACAAGGCTAAAACAATATCCAATAGTTGGAGAATGAACGGTCCAAAAGGTTCTAGGTATGCATCTAGTAAGTCAGGATGGTTTGATAGCTATGCGTTTGATGATTGGATAAGAAGTATTGCCATTCCTTATTTGAGAAAATTGCCTGGTAGAAAAATTTTAATAGGAGACAATTTATCAAGCCATATATCCACAGATGCAATCAAATTGTGTCAAGAATATAATATTTCATTTGTGTTTTTACCAGCTAATTCTACACATCTTACGCAACCTCTAGATGTGGCATTCTTTAGACCTTTAAAATGTCACTGGAGGAAGATTCTTGAAACTTGGAAAAAAGGAGAAGGAAGGGATGAATGTAGTGTACCAAAAGACCGCTTTCCTAGGCTTCTTAATATATTAATGAAAACCATTAACGAGAAATCTACTGACAATTTAAAAGCTGGGTTTGAAAAATGTGGCATTTATCCGTTAAATCGAGATAAAGTTTTAAATATGTTGCCTAGTGAGGACAATTATGAAAATACAACTGAAGATGTGAATAGTTCAATTAGAGATTTTCTTAAAACTATGAGGAGTAGCGAAACAAAAGTGATTCGCCAAAAAAGGAAAAAATTGAACGTTCTGCCAGGTCAAAGTGTTGAAGCCACAAATGATTCTGATGAAAACAATGATGATTCAAATTCTGAATCATTAACTATGGACCAACCAGATGAACCTAATGATGAAGTTAATGATGTTACACATGCTGTTGTTTCTGATACAGATGAAGATGATAATGATTCTGAATGTTCTTTAAATTATCAACAATTGGTTAAACATAATAAACAATTTGTCCATGTTTTTCCAATAAATGGACCAAATGAAATCAAAAAGGATGATTGGTTACTAGTAAGTTTTGAAACTACGACAAGTAAAGCCTCAAACAGCAATATTGTGTATAAATATTATATTGGTAGAGTTATAAATTGTAACATAGAACAGAAGAACTTTGATGGAACTTTTTTGAGACATTAA
- Protein Sequence
- MPNQYNPEPRSNRYKVPNKCDLANAVMCIKQKKMSYREAAKVYGIHHSVIYRHVKNPQIKKQGGQTSLTKQEEDLIIAGILLCSEWGYPFDKFDVRLLVKGYLDRRGKKINKFKNGNMPGRDWVNSFLKRNKDILAVRMCQNIKQSRAGISRITISEYFDKLEISLDGVPPSNILNYDETNLTDDPGRKKIITKRGTKYPERIMNHSKTSNSIMFAGSADGTLLPPYTVYKAKTISNSWRMNGPKGSRYASSKSGWFDSYAFDDWIRSIAIPYLRKLPGRKILIGDNLSSHISTDAIKLCQEYNISFVFLPANSTHLTQPLDVAFFRPLKCHWRKILETWKKGEGRDECSVPKDRFPRLLNILMKTINEKSTDNLKAGFEKCGIYPLNRDKVLNMLPSEDNYENTTEDVNSSIRDFLKTMRSSETKVIRQKRKKLNVLPGQSVEATNDSDENNDDSNSESLTMDQPDEPNDEVNDVTHAVVSDTDEDDNDSECSLNYQQLVKHNKQFVHVFPINGPNEIKKDDWLLVSFETTTSKASNSNIVYKYYIGRVINCNIEQKNFDGTFLRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -