Mcer001294.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- -
- Assembly
- None
- Location
- Mc10006:3727-5903[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-09 2.6e-06 27.7 0.0 4 43 159 199 158 201 0.89 2 2 2.1e-06 0.0015 18.8 0.0 4 38 214 248 212 251 0.92
Sequence Information
- Coding Sequence
- ATGCACCTGTACACCTCCGCGGAAAGCCTCATCGAGGCTGCGTCGTGGGTGGCGGGGGCGGCAAAGCCCCTAAGAACAGGAAGTGCTTCAGGTGTCGGCAACCTGGCCATTTGGTGCGGCAGTGCACAGTCCGGCCGCCGAGAGAACGCTACTCGCTCGCGCATCCAAATGATCGAGCTCCGCAGTATCGTACCTAAATTTCTCCCACTCTACCACCTAGTCACCGCCGTAAATTCCCCTACTCAGTGCGCAGCGTCGGCGGCCAGAGTTAACGGCGGCCAGCGTTTTAGAGGGTTTAATGGTGGGAATGCGCGAAAACGGACGAATTTTGGTCGCCGCCCAGTAGCGTTCTCTCGGCGGCCGGACTATAGTATCTTACTGATTAACCTGTCACCAGAGGGCGTTGGCATCATTGAATGCACTGTCCCTATCATATTTTTTTTACTAATAAATAGTTGTAGCATGTCTTACAACGATTTGCAATCAGCTTTGGATGCCTTAAAAAATGGATCGCAATCGATTAGAAAAGCAAGTAGAACTTTCCAGATCCCCGAAACGACACTACGCCAGTACGCCCAGCGTGAAGGGATCACTGTGAAAGCGGCAACCCGCAGGTACGTACGTACTGAGAATAACGTCGCTCTGAAAGAAGCCATCGAGTTAGTTGTATCGAAAGGTGTGCCGGTGAACACCGCGGCAATTGCGAAGGATGTACCTCGAACGACTCTGAGAAAGGCACTGGAAAGTAAAATCATAGAGACCAGTGTGAAGTCGGTGGACCCGAAAAAGACGCGGTATGAAAGCGTACAAAAAGAGTCGAGCTCACCCGCATATGAATTGTCACCGAGTGCTGAGGCCTCGGTAGACAAAACCCCCGTAACTGCAACCAAGCTAACGATGATCAAAACCGTCATCAAGTACAGCGGCGGAACTACACAATTGATGAAAAAAGAAGTTGAATTGCACTCGTGTGCTGCATATGGACCGAAAATTTATGTTAAGCCGAATGCTCTTGAAATTATGTAG
- Protein Sequence
- MHLYTSAESLIEAASWVAGAAKPLRTGSASGVGNLAIWCGSAQSGRRENATRSRIQMIELRSIVPKFLPLYHLVTAVNSPTQCAASAARVNGGQRFRGFNGGNARKRTNFGRRPVAFSRRPDYSILLINLSPEGVGIIECTVPIIFFLLINSCSMSYNDLQSALDALKNGSQSIRKASRTFQIPETTLRQYAQREGITVKAATRRYVRTENNVALKEAIELVVSKGVPVNTAAIAKDVPRTTLRKALESKIIETSVKSVDPKKTRYESVQKESSSPAYELSPSAEASVDKTPVTATKLTMIKTVIKYSGGTTQLMKKEVELHSCAAYGPKIYVKPNALEIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -