Mcer000546.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- JARID2
- Assembly
- None
- Location
- Mc11014:270-6969[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-21 4.5e-18 66.1 0.0 6 89 24 105 20 105 0.93 2 2 0.88 3.1e+03 -0.7 0.0 49 63 119 131 113 156 0.78
Sequence Information
- Coding Sequence
- ATGCGTTTCACTGCTTACAACCAGTATGTACACAAGATGATGAACCGTTGGGGCCCTAATGTCCGCGAAATGATGGCTATGAAAAAGTACCTTGAAACACAGTCAATAGTCTTTTCCAATCCACCACTCATTGGTGGCATGGAACTGGACTTACCCAAGCTGTACCATACAGTACAGGAGCTCGGTGGACTCAAGGAAGTGATAGAGCTGGACAAATGGTGTCGTGTTGCTGATCTGATGAAGATTCCAAAGAGTGCTCAAGACCGTGTGACCAAACTTGATGACATATACTGCAAATATCTATTGCCATACGACACACTCTCGCACGATGAACGGCAAAAGTTGATCGCTGAAGTGGACAAAGAGTGGAAACAGATCTGTAAAAAAGGTGACACTGATGACGAGCTGTATGAAGACGTCAACGACTGTATAGTAAAGGGTCGAACTATCGCGTTGAGCGCCTATTACCGGGTAGCACGCAACACCATTGCCATGTGGTTCAAGGAACATCAACAGCAGCAGCAGCAACCGTCAGGTGGACACTCATCGTCGACGTCAACTGCGGCAGCAGCAGTGGTCCGGGCTGAAGACGTCGAATCACTCTACTGGAAAAACGTGCAGGACAGGAAGAACCACATCTGCGTACTGTCCGGTTCGATTGATTCAGGAGCCGAGGGTTATGGGTTCCCAACAACAAAGACGGCCACGTTTACCAAACACCCATGGAACCTGAAGGTACTTACTAACAATCCGGTGTCTGTACTCAAGTCGCTGGGCCCGGTGATGGGTATGACTGTGCCTACTATACATATGGGCATGGTATTCTCGGCGTGCTGCTGGTACAAGGACCCACATGGGTTGCCTTGGATTGAGTACCTGCATACCGGTGCTGACAAAGTGTGGTATGGCGTGCCATCCTGTGAGAGCGACCGGTTCCGGGCAGCCATGAAGCGCCTGCTGCCTCGAGCCGTGGCTGAAGGTCAAAACCATCACACCTGGCTGGCCGCAGACAGCGGCATGGTGCCACCTGCTCGGTTGCTTGAACACGGTGTCACGCTCACCCGGACCGTGCAAAAACCAGGCCAATTCCTCATCGTCATGCCGCGCGCTTACACATGCAATGTGTCTACTGGTTACGTAATATCTGAGAGCGTGTACTTCACACAGCCCGGTTGGCTCAACGGTGCTGAGAAGATATTCCAGGACTTGCAAAAAAACTGTGAACCCGCCGCCTTTTCGTTTGAAAAGCTTCTGATAAACATGTCCACGGATTTGCGTACACCTCAAAACATACTGAAACAGCTTCTAAACATGTTAAGCAACATGAGAGACTGTGAAGTGGCGCTCCGGAGTCAGCTGGTGGAGGATTTAGGCCTAAAGGCGTCCGAACGTATTCGGCCCTCAACGTCCAAATCAAACGAGCATGATGATGACTATGAGTGTGACGTGTGCCATTCAATTCTTTACATATCAATGGTGCACAATTCGCATGAAGACTGTGATTATTGTCTGAGACATGGCATTGAAATTTTATCGAAAAAACACAATCAACTCAAGTATTACAAGTTTTTGTACACTTTTGATGAGACTGATTTGGATACAATATTAGTAAAACTTCGTGAAAGGATTGATTCAAAAAAAAAAAAGACATCCACCAAAAGTTGA
- Protein Sequence
- MRFTAYNQYVHKMMNRWGPNVREMMAMKKYLETQSIVFSNPPLIGGMELDLPKLYHTVQELGGLKEVIELDKWCRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDTDDELYEDVNDCIVKGRTIALSAYYRVARNTIAMWFKEHQQQQQQPSGGHSSSTSTAAAAVVRAEDVESLYWKNVQDRKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSCESDRFRAAMKRLLPRAVAEGQNHHTWLAADSGMVPPARLLEHGVTLTRTVQKPGQFLIVMPRAYTCNVSTGYVISESVYFTQPGWLNGAEKIFQDLQKNCEPAAFSFEKLLINMSTDLRTPQNILKQLLNMLSNMRDCEVALRSQLVEDLGLKASERIRPSTSKSNEHDDDYECDVCHSILYISMVHNSHEDCDYCLRHGIEILSKKHNQLKYYKFLYTFDETDLDTILVKLRERIDSKKKKTSTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -