Basic Information

Insect: Mythimna separata
Gene Symbol: stc
Assembly: GCA_030763345.1
Location: CM061172.1:18323920-18349981[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.8e+04 -4.5 1.6 15 19 631 635 630 635 0.81

2 13 0.046 8.6e+02 1.1 1.2 2 10 663 671 663 671 0.93

3 13 4.3e-05 0.81 10.8 18.1 4 19 679 694 677 694 0.93

4 13 9.6e-08 0.0018 19.3 11.0 1 18 730 747 730 748 0.98

5 13 2 3.8e+04 -4.2 2.4 7 11 752 756 752 757 0.89

6 13 0.0012 23 6.2 16.0 1 19 789 807 789 807 0.98

7 13 2.1e-05 0.39 11.8 12.7 1 19 848 870 848 870 0.87

8 13 0.0038 73 4.6 7.4 1 11 910 920 910 921 0.95

9 13 0.049 9.4e+02 1.0 0.3 4 10 925 931 924 932 0.93

10 13 7e-06 0.13 13.3 15.0 3 19 939 955 937 955 0.92

11 13 0.00045 8.6 7.5 9.6 10 18 1002 1010 999 1011 0.92

12 13 4.9e-08 0.00093 20.2 14.0 1 17 1321 1339 1321 1345 0.85

13 13 0.00044 8.4 7.6 4.8 1 13 1351 1362 1351 1363 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.8e+04	-4.5	1.6	15	19	631	635	630	635	0.81
2	13	0.046	8.6e+02	1.1	1.2	2	10	663	671	663	671	0.93
3	13	4.3e-05	0.81	10.8	18.1	4	19	679	694	677	694	0.93
4	13	9.6e-08	0.0018	19.3	11.0	1	18	730	747	730	748	0.98
5	13	2	3.8e+04	-4.2	2.4	7	11	752	756	752	757	0.89
6	13	0.0012	23	6.2	16.0	1	19	789	807	789	807	0.98
7	13	2.1e-05	0.39	11.8	12.7	1	19	848	870	848	870	0.87
8	13	0.0038	73	4.6	7.4	1	11	910	920	910	921	0.95
9	13	0.049	9.4e+02	1.0	0.3	4	10	925	931	924	932	0.93
10	13	7e-06	0.13	13.3	15.0	3	19	939	955	937	955	0.92
11	13	0.00045	8.6	7.5	9.6	10	18	1002	1010	999	1011	0.92
12	13	4.9e-08	0.00093	20.2	14.0	1	17	1321	1339	1321	1345	0.85
13	13	0.00044	8.4	7.6	4.8	1	13	1351	1362	1351	1363	0.95

Sequence Information

Coding Sequence: ATGTCGCAGTGGAACAACACTTACACTTACAACAACCAGTACCAAGCTTGGAACGGTGACCCGAACGTCCAATATGTGAACCAAGCCTATTATCCCAACAGACCAGAGCAATCGAATCAGTATGTAAGCTTTAATGAGTTTCTATCTCAAATGCAAAACAGTGGTGCGCCTAGTGCTAGCAACTATAGCAATGTACAGTATGAAAACTATCCTGCAAGGCAATATAGTTACCAGAATGTACCTTCCACTACTCAAAACCCCCAGTTAGAGAGTTATGGATATGCAGCAACCACAGGCAATGTGTCTAGTGGCACTGAGGCCTACCCAATGAATGTTCAAAGTCAATTCAACCCAGTAGCACCCACTCCCAATGTGTATACAAATGCTATGATACTCAAATCTAATCTCACTCCAACAGCTACTGAATTTGTGCCAAAAGGTTCTATGATGACAACCTCTACTAGCGCTCAGAACATTCCTGACTCTAGTGCTGTGCATGATGATAGTGAATCTAgaaataattatagtaatattaATGAACCTAGGAACCATTATAGTAATATGAATGATTCACGAAATAACTACCCTAGTGTAAATGAACCAAGAAATACTAGTGGTAGTTCATCTGACACAAACTGGAGAGAAAGATCACAACCCTCGCAGCAAAGTACTGAAACAAGCCAGAAACCTGATTCCTATCAACATGGAGATGTTGATACCAGAGTAGAGCACCCTAAAAAACAAGAATCAAATGGTCGACACCGTGATAATAATTATCGCAACAATGATTCTAATGGGCGCCATCATGATTCCAACAACCGCAATCAGGATTCAAACAACCGTAATCAAGAAACAGATAGTAGACAATATGAATCAAGTAATCGCCAACATGATTCTAGCAGTAGGAACTATGAATCTAATAACCGTAACTATGATTCTAACAATAAAAGAGGCCAAGGAAAAGGCAACTTCAAGTCAAAGAATAAAGATGATGCTCGTACCTTCTACAATAGTGCTATTAGTAAAGACAGTCAAGATGTAAGGAATGGAAGGGGAGAAACTTCAGGGCGTGGAAAGAATTGGGTTGGAACACCACGGCTAAGAGCCATGGAACGTAACAGCACAGAAGATGAACAATATgccaatacttatttacaagcCCGAGAAGAAAAGTCGGAAAGAGACAACAACAGGGAGACAGACAACCGAGACAGGGACACAGATAGGGGAAGAGATACCCGTGACAAACATAGAGATAGCAGAGATACTTATGAAAGAGATAGAGATTATCGTGATGTCCGTGAGACAGAAAGAGATAATAGAGACTATCGTGAGAGAGATAGAGGTAACCGAGACACCCGTGAGAAAGATAGAGATAGCCGAGATATCCGTGAAAGAGGTAGGGATTATCGAGATGTTCGTGAGAGAGATAGAGATAACAGAGACGTTCGGGAAAGGGATAGAGATTACCGAGACAACCGTGATAGAGACAGAGACAACAGAGACACCCGTGAGATGGATAGAGATTATCGTGATGTTCGTGACACGGATAGAGATAATCGGGATATTCGTGAAAGGGACAGAGGCAACCGTGATATTCGCGAGAGGGATAGAGATACCAGAGAGAGGGAGAGGGCAATAAAGTCTGAGAACATACCCAGTCCTGCTCGAACTAAAACTAAATATGGCAATGATCAAGTGAACAAAGAAATGACCCAACGTGAGCGTCTAACTGAACAACTAGACAAAGGTACCCTGGAATGCCTGGTGTGCTGCGACCGAGTCAAGCAGTTTGACCAGGTGTGGTCGTGCTGCAACTGTTACCATGTACTGCATCTACGGTGCATCCGGAAGTGGGCTATGAGCAGTATGGTTGAAGGTAAATGGCGGTGCCCAGCTTGCCAGAACACGAACGAAGCCATCCCCACGGAGTACCGCTGCATGTGCGGCGCGGTGCGCGCGCCGGAGTACCAGCGCGGCTCCACGGGCGCGCACACCTGTGGCCGCGCCTGCCGCCGCGCCAGGGCGTGCCCGCACCCCTGCACGCTGCTGTGCCATCCTGGACCTTGCCCGCCCTGTCAGGCTACTGTTGTCAAGCATTGTGGCTGTGGTGCAGAAACCCGCTCGATTCTCTGCAGCAGCAAGCTTCCGCAAGTGTGCGGCCGCGTCTGCGGACGTACACTATTGTGTGGCGTGCACAACTGTGCCAAGGAGTGCCATGAGGGACCCTGTGACATTTGTGCTGAGACCGTCGAACAAGTATGCCACTGCCCGGCCGCCAAGTCGCGTTCAGTGGCGTGCACGCTGGAGACGGGCGCGTGCACGAGCTGGTCGTGCGGCGACACGTGCGGCCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCACTGCCACGCGCCGCCCTGCCAGCCCTGCCAGCAGCTGCCGCAGTACGTGCACGCCTGTCCTTGTGGGAACACCAAGCTGGCGAAAGATTCGCGCAAGGCGTGCACGGACCCCATCCCGTTGTGCGGCAACATCTGTGCCAAGCCGCTGCCGTGCGGGCCCGCTGGCGACAAACACTTCTGCAAACTTAACTGTCATGAAGGTCCGTGCCCAGAATGTCCGGATAAAACCGTTCTGCAGTGCCGCTGCGGCCACTCTAGCCGCGAGGTGCCTTGCGCCGACCTGCCCGAGATGTACAACAATGTGCTGTGCCAAAAGAAGTGTAATAAGAAACTGTCGTGCGGACGTCACCGCTGCCGCAcggtgtgctgcgcggcgacgtcgcaccgctgcgccgtggtgtgcggccgcacgctgtcctgccagacgcaccgctgcgaggagttctgtcacaccggccactgcgcgccctgcccgcgcgtcagtttcgACGAGCTGACCTGTGAATGTGGAGCCGAAGTGATCCTGCCCCCCGTCCGCTGCGGAGCGCGGCCTCCCGCCTGCAGCGCGCCCTGCATCAGACAGAGACCCTGCAAGCACCCGCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGGTGAGTGATCCTGCCTCCCGCCTGCAGCGCGCCCTGCATCAGACAGAGACCCTGCAAGCACCCGCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGGTGAGTGATCCTGCCTCCCGCCTGCAGCGCGCCCTGCATCAGACAGAGACCCTGCAAGCACCCGCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGGTGAGTGATCCTGCCTCCCGCCTGCAGCGCGCCCTGCATCAGACAGAGACCCTGCAAGCACCCGCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGGTGAGTGATCCTGCCTCCCGCCTGCAGCGCGCCCTGCATCAGACAGAGACCCTGCAAGCACCCGCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGGTGAGTGATCCTGCCTCCCGCCTGCAGCGCGCCCTGCATCAGACAGAGACCCTGCAAGCACCCGCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGTCATGGCGACCACGAGAGGAGTTCTCGTGCGGTCTCCCGTGCGGGAAGCCACTGCCTTGCGGCAAGCACACCTGTATCAAGACCTGTCACAAGGGCCCTTGTGATACTGGCAAATGCACCCAGCCGTGCATGGAGAAGCGACCGTCCTGCGGGCACCCGTGCGCAGCGGCGTGCCACGTCGGCGCGGaaggcgcgggcgcggcgtgccCCAGCAGCGCGGCGTGCCGGCGCAGCGTGCGCGCCACGTGCCCGTGCGGCCGGCGCCACGCCGACCGGCCCTGCTCCGACAACGCCAGGGACTATGCTAAGTAA
Protein Sequence: MSQWNNTYTYNNQYQAWNGDPNVQYVNQAYYPNRPEQSNQYVSFNEFLSQMQNSGAPSASNYSNVQYENYPARQYSYQNVPSTTQNPQLESYGYAATTGNVSSGTEAYPMNVQSQFNPVAPTPNVYTNAMILKSNLTPTATEFVPKGSMMTTSTSAQNIPDSSAVHDDSESRNNYSNINEPRNHYSNMNDSRNNYPSVNEPRNTSGSSSDTNWRERSQPSQQSTETSQKPDSYQHGDVDTRVEHPKKQESNGRHRDNNYRNNDSNGRHHDSNNRNQDSNNRNQETDSRQYESSNRQHDSSSRNYESNNRNYDSNNKRGQGKGNFKSKNKDDARTFYNSAISKDSQDVRNGRGETSGRGKNWVGTPRLRAMERNSTEDEQYANTYLQAREEKSERDNNRETDNRDRDTDRGRDTRDKHRDSRDTYERDRDYRDVRETERDNRDYRERDRGNRDTREKDRDSRDIRERGRDYRDVRERDRDNRDVRERDRDYRDNRDRDRDNRDTREMDRDYRDVRDTDRDNRDIRERDRGNRDIRERDRDTRERERAIKSENIPSPARTKTKYGNDQVNKEMTQRERLTEQLDKGTLECLVCCDRVKQFDQVWSCCNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAVRAPEYQRGSTGAHTCGRACRRARACPHPCTLLCHPGPCPPCQATVVKHCGCGAETRSILCSSKLPQVCGRVCGRTLLCGVHNCAKECHEGPCDICAETVEQVCHCPAAKSRSVACTLETGACTSWSCGDTCGRVLACGAHVCRAHCHAPPCQPCQQLPQYVHACPCGNTKLAKDSRKACTDPIPLCGNICAKPLPCGPAGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPEMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFDELTCECGAEVILPPVRCGARPPACSAPCIRQRPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEVSDPASRLQRALHQTETLQAPAAPLLSLWRLSALCSADYQALSWRPRVLTTKRCHGDHEVSDPASRLQRALHQTETLQAPAAPLLSLWRLSALCSADYQALSWRPRVLTTKRCHGDHEVSDPASRLQRALHQTETLQAPAAPLLSLWRLSALCSADYQALSWRPRVLTTKRCHGDHEVSDPASRLQRALHQTETLQAPAAPLLSLWRLSALCSADYQALSWRPRVLTTKRCHGDHEVSDPASRLQRALHQTETLQAPAAPLLSLWRLSALCSADYQALSWRPREEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAACHVGAEGAGAACPSSAACRRSVRATCPCGRRHADRPCSDNARDYAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -