Msep024359.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mythimna separata
Gene Symbol
nfxl1
Assembly
GCA_030763345.1
Location
CM061188.1:17412153-17414633[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 3.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.011 2e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 3.1e-07 0.0059 17.6 15.9 3 19 186 202 185 202 0.95
4 20 1.6 3e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 20 6.3e-08 0.0012 19.9 11.6 4 19 240 255 237 255 0.92
6 20 1.6 3e+04 -3.8 1.6 6 10 280 284 279 284 0.89
7 20 1.6e-09 3.1e-05 24.9 12.5 1 19 290 308 290 308 0.99
8 20 7.9e-06 0.15 13.2 19.8 3 19 345 361 337 361 0.86
9 20 1.2 2.3e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 20 2 3.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88
11 20 6.7e-05 1.3 10.2 20.3 1 18 395 412 395 413 0.97
12 20 4.5e-10 8.5e-06 26.7 14.0 1 19 422 440 422 440 0.99
13 20 0.0002 3.9 8.6 6.4 9 19 488 498 486 498 0.89
14 20 0.039 7.4e+02 1.3 5.5 4 12 510 518 508 518 0.89
15 20 0.35 6.6e+03 -1.7 3.4 14 18 547 551 547 552 0.86
16 20 0.12 2.3e+03 -0.2 0.5 7 12 567 572 567 579 0.83
17 20 5.3e-06 0.1 13.7 4.8 1 11 588 598 588 599 0.97
18 20 0.68 1.3e+04 -2.6 1.5 15 18 613 616 612 617 0.82
19 20 0.00011 2 9.6 13.2 4 18 630 645 628 646 0.86
20 20 4.2e-06 0.079 14.0 12.0 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGCCGATACAGAGATGCTGCCGCAAAATTGCAGCAATACGtgcaaaaacatttaaaagaaaTGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAGTCCACTGTCTTGGAGACCATGTTCCAGAGCTACTGGCGGGGCGGCGGAGACACTCAGATGTTGAACAGGACCAAAAACCTCCTTGAAGAAGCCATAAGCGGCCGCTCAGTGACTTGTCTCATATGCATATCGTCGATCAAAAAATCTCACGCTATTTGGACTTGTGATCATTGCTTTGCTTACTTCCACCTCTCTTGCATCCAAAAATGGTCGAACGACAGCATAAGCTTGCGTAGTGAAGAAAGTACGGGCCCGATAGCTGTgataaaacaacagaaaatcGAATGGTGCTGTCCTAAGTGTCGAAACGCTTATTCTAAAGAAGAAATACCTCGGAAATATCGTTGCTTCTGTGGCAAAACTGACGACCCACCGCATCATCCTTGGCTCATTCCTCATACGTGTGGTGAAGTCTGTGGGAAGAGGTTATCAACTGGTGACAACTGTAAACACAAGTGCTTGCTTTTATGCCACCCTGGTCCATGTCCCCCATGTCCACAAACTGTTAACGGGATATGTTTCTGTGAGAAGGAACGTAAGAGAGTGAGatgcagtgctgccacctggtcCTGCGGCCAAGTCTGTAAGAAAACCCTTTTGTGTAAGGCTCATTATTGTAAAGATGTCTGTCATTCAGGTGAGTGTCCACCATGCAGTTACACAAGTATTCAGCCATGTCAATGTGGTGCTGAGAAAGCTAAAAGACCGTGTAATGATCCATTTTGGCAGTGCAAGAAGCTGTGTAACAAGTTATTTTCATGTGGCTATCACAAATGTGAGAGAATCTGTCACTCTGGAAACTGTGGAGACTGTCCTAACTCGGGAACATTATCATGTCCTTGTGGTGCTAATCAGCGCTTTGTTCAATGTCCAGATGTCATGGAAACCTGCCTAGGCACATGTGGTAAAAGGCATGAAGGTTGTGAACATAAATGTCCAGAAAAATGCCACAATGGTAACTGCCCACCTTGCCAAGTTCTAATTGAAAAGAAATGCCATTGCTCAACACATACAAGGTCCTTACCATGTAGCAAGGACTTCAAATGTGAGACTAAATGTAGAGGAATAAGACTGTGCGGCAAACATGGTTGTGGAAGAAAATGCTGTAATGGAAACTGCCCTCCATGTGAGAAAACATGTGACAAAGGCCTCCAATGTGGCCGGCATAAATGCACAAATATCTGTCATCGAGGACCTTGTTACCCATGCCCTTTAGAATCAAAAGTTACCTGCAGATGCAAAGAGACTTATGTAAGAGTTCCATGTGGACGGGAACGGCAGACAAAGCCTCCAAAATGCAACCTACcgtgcaaaataaaatataaatgtggCCACAGTGAAGAGAATAAGCATTCCTGTCATTTTGGTGATTGCCCTCCTTGCAAAGCTATCTGTGAAAAACAATATTCAAATTGTGATCACTTATGTAAAGCAGTATGTCATGAATATGTTGCTGTGCTGTTCAAACAGGTTGAGAAACCTGCTACACCATGGGAAGTGCAACCACCAAAGACCAAGATAATGACCCTAAATTGTCCCCCATGTGACACACCTGTACCAATAGTTTGTTTTGGAGAGCATGAGACAGACCAGCAACCATGCCACACAGCTTCTAGAAGGCCTTGTGGAAGAGAATGTGGAAAACCATTGGCTTGTGGCAATCACAAATGCTCCTTACTATGTCATTTATATAGCCCTGATGCGGCATATCCAAACGTGCCTTCGAGTTGTAAGCCATGTAACAGAGAGTGTTCAGTTCAACGTCCTGCGAAATGTGCTCATAAGTGTTCTATAAGGGCTTGTCATCCTGGTCCTTGTAAACCATGTGAGATACTGGAACGGCTAGCCTGTCACTGTGGTGTGACAGAAATTTACCTGCGTTGTCGAGAATTGTCAACAGCTACAGAAGAGATGTTATCATGCAAGCAACAATGTCCTAAGAACTTAGACTGCGGTCACCGTTGCCGGAACACATGCCACTCGGGAGCTTGTGGCAACCAAGTTTGCACTAAGAAAACTAAAGTTCACTGTCCTTGCGGTAACATAAGGAAAGAGGCTCCGTGTAACTCTGTCAGAACCGGAGAAACAAAGATAATGTGTGATGAAACCTGTGAAGCTAAGAAAAAGGCAGCTAAAATAGAGcaagagaaagagaaacagagaTTGAAAGAATTAGAAGAGGAGAAGAATCGTAGAGAATTAGCAGAGTATGAGTGGAAGCTAAGTGGTAAGAAGAAGAAATACAAGGAAAAGAAAATGGTTGTCGGTAAAGATGACCGTGGGTTCCTGAAGAGGTATTGGGTTCCAATATCATCGTTCCTAGTTATGATGCTAGCctcaatttattatatattttatgtaggtttGGACTAG
Protein Sequence
MARRYRDAAAKLQQYVQKHLKEMKELSSSEDEDPCESTVLETMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICISSIKKSHAIWTCDHCFAYFHLSCIQKWSNDSISLRSEESTGPIAVIKQQKIEWCCPKCRNAYSKEEIPRKYRCFCGKTDDPPHHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAATWSCGQVCKKTLLCKAHYCKDVCHSGECPPCSYTSIQPCQCGAEKAKRPCNDPFWQCKKLCNKLFSCGYHKCERICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEGCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGIRLCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAICEKQYSNCDHLCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLNCPPCDTPVPIVCFGEHETDQQPCHTASRRPCGRECGKPLACGNHKCSLLCHLYSPDAAYPNVPSSCKPCNRECSVQRPAKCAHKCSIRACHPGPCKPCEILERLACHCGVTEIYLRCRELSTATEEMLSCKQQCPKNLDCGHRCRNTCHSGACGNQVCTKKTKVHCPCGNIRKEAPCNSVRTGETKIMCDETCEAKKKAAKIEQEKEKQRLKELEEEKNRRELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVPISSFLVMMLASIYYIFYVGLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
-