Msep016947.1
Basic Information
- Insect
- Mythimna separata
- Gene Symbol
- kn
- Assembly
- GCA_030763345.1
- Location
- CM061181.1:14856052-14872834[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-53 1.9e-49 169.5 0.0 11 135 83 197 74 202 0.93
Sequence Information
- Coding Sequence
- ATGCTGGTGGCGTGGGCCGTCCCCGAGCTGGGCGCGAGCGTCCGGCGAGAGATTCGGTCGGACGAGTTGAACGCGGCGGGCGGGTACACGGGTTCACCGTGGCCGCCGCTGGAACTCGACCCCGTGGGATGGGGGCGAAAGCTGTACCCTTCGGGAGCCCCAAGATCTTCAGGTGGGCTGATGTTTGGCCTGCATCACCAGGAGGCGGCGGGAGGCATCCACGCTCAGCCGCGTGGACCTGTCACCTCGCTGAAGGAGGAACCGCTGACCAGAGCCTGGATGACTCCGACCTCGCTAGTTGATAATACCAACAGCGTAGGCGTGGGTCGAGCGCACTTTGAAAAGCAACCGCCCAGCAACCTGCGCAAGAGCAACTTCTTTCACTTCGTGGTCGCCCTTTATGACCGCGCGGGCCAACCGGTGGAGATCGAACGGACCGCCTTCATTGGCTTCATTGAAAAAGATCAGGAAGTCGAAGGGCAGAAGACGAACAATGGCATCCAGTACAGACTTCAATTACTTTATGCAAATGGTATCCGACAAGAGCAAGACATTTTCGTTCGACTCATCGATTCGGTGACGAAACAGGTAAGACCTTCAATTATTCTGTTTTAA
- Protein Sequence
- MLVAWAVPELGASVRREIRSDELNAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGGIHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVRPSIILF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00869410;
- 90% Identity
- iTF_00973509;
- 80% Identity
- -