Msep001317.1
Basic Information
- Insect
- Mythimna separata
- Gene Symbol
- rbr-2
- Assembly
- GCA_030763345.1
- Location
- CM061167.1:31846682-31873200[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-16 5.2e-13 50.2 0.0 11 89 926 998 918 998 0.87
Sequence Information
- Coding Sequence
- ATGAGTCTTTTAGCAAGATTGTCTGCAACTCGGTTCCATTGTAAAGGCAAGAAGGTAGAAGGCCCTTGGGGTCAACCCTTCGCCACTGTGGCCCTTGTGGTGGCTCGCTCGCGCCGCGTTCAGGCGCAGCGCAAGTTCGCGCAGGGCGCCTACGTGCCGCCTAACGTGACCACTCTCCCGACCAACGACAACCGTCGTGACACAAACCCTGAAACCAAGAACATAACAATCAATCACATGCCGGCGACCAGTTTACTGGACGTCGTCTCCTTACAAAGAATACAATCACAACCTGTAGTGCTCATTGAGAGGCTGGGCGGCAGACAGATCTCGCGCGACGCGTCGCCGCTGCTGGTGGAAATTCGCTCAAAACCAATAACCATGaAATCTGGATTTAAAAAAGCTGCTGACACACCGAAAGTACACGCGACCCGCCAAAATGTAGAGGTTATTAAACGTTTACACCCTATGTCCTTGAGGTCGCGACGTTTAAGTAAGCTGGAGTTGAACAGGCTTACTGCTAGAAACAGTGTATTTAAACGAAAGAGACCTGCGAAGCGGGTTTCGAGAACGTATTCCAGCGATGACGAAGACGAGCCTCTCATTTTCCATAAAACTCGTGTTGCGCAAATTAAGAAATCTTCTGCTGCTAGCAGTCACAATAATACCAGCGGGATGGTGTCTAAACagaaatcaacaaaaaaacttCTGGTACCTCGCAAAATTACAAGAGAAGTCAAAAAGAGTCGTCTCTTAAAACAGACTTCCGGGAAGAGCGCTCCTCAGAAAAGGACAGCTGTTGGGTCGACTCCCGAGCAATATGCTGGGATTTCCGTGAGCGTCAAGGCAGAAAGTGTCACAAGTGAGGAAGACAATCATCTGGCCATGCCGTCCCTAAATGACCAGCTTACCTGTGATTCGTTTCCAGATGACTTGCTCTACATTAACGGCCCAGACGATCTAGCGGCCCCAGAGGATCCGGTGGCCACGGAGATTCCGGTAACTCCAAAGGTTCCGGTTTCAGTCACCAAAGAAGTGCCCATGGCCGCACATATCCCGGCCGCCCCAGTGGTTCCGGCTGGGGCCGACGATGACATAGAAGATtatccagtcaagccagatggTCCATACCGTCTAAAGGCCACCTCTGACAAGACTCTTCCGTGCTACTCGTATACCGACCCAGGTGAATTTAGTGATCAGTCTGACATAGGTGGCATGTCCGCAGTAACAGCAGCTAGATTGGATGAAGCTCTATGTTACTTAGACGACTTACCAGATGCAGATAGAGAATCATTTTATGGTTCTGATAATGAAGTAGTGAAACAGTGTAGAGAACGAAAGAAAGCACAAGAACTTGAGAATCAACGTTCACTTGAAGCAGAACTTGCGAATGAAGATGCTGACGCAGAAGAGAGTCAAGATGGTCTGTTACTTCAGATGGGCAAAAAATCAGACAGTCTCAAGGGCAAGGTACTGCCAGACTATGATTCTGATTATTCAGATTCGCCGAATCTAGTATATGAGTCGGATTCTTCAGAAAAATGTGATGAACCCAAGCCCGTGGCGAAGCAGAATGGAACTCGACTTTGCAATTCACCAGAACCTGGGCCAAGCGGTATGCAATCAAATTATTCTATTAACACTCGAAAGAGAAGCCGCGATAAACTTTACGAATCTTTATTGCTGGAAAACAAGCATAATGGCGACAGTAGCGACGTCCCTAGCAGTAGTAACGACGTCCCTTGTAGTAGTAGCAGCTTTAATGCAAGGAGAAAGCTTCGGAAAGGGAAGCGAACCGTAGCAGCTCGCGGCACGGACCAGGATCTGATAGACAAGTCAGAAGAACAAGTAGACTGCCGTAATGGAGACCCCACGGACATTAGTCCGGATAACAAAGCAGGGCCATCGCGGAACAAACGAGAGCCTCACAATAACGAGGCCGGCGAACAAAGCGATGCTGGGCCATACGCAGATATAAGAATAGATAATGTTCAGAGTATTGAAATCGCTAATTTAACTGACTCTGATAAACCTGCGGCTCCAAAGAAAAGCGCACGCTTTACATCACCGGCGAGCTCTTCGAACAACGCTGAACGTGCGAAAGTACTACGTGCTCGAAGAGACAGAGCCAAAATCACTTATCAAAGACAGCTTACATTTAAAAAGCGTTTAGCTGAATCGAAACAAGATAGAATAAGAAAAgctcacaaaaaagaaatacaagtCCTGGAGGCGAAAAAACAAAAGGAAATATTACGGGTTATGGCAGAAAACAAAGATTATGAGGCGGAAATTTCCCGCTTACATGAGCGCTTTAACCAAAtgcttaaaaataaagaaaccgAGTTTACTCGCCTCGCGCAGCAAGTTAGAGAAAAAACGAGAGCTGAAATGGAGGCAGATCGCCGTTTGTTCGAGGAAGCCGACAACCTGGCGTCGGCCCTAGACAAAGAAAAGGATGCTAAGGACATGAACGCTCCAGAGTCCGCAGCAGAAGAGGAACCTATCCCGACTGGACAATTGGGCGGGTCTCTAGAGGAAGGGCCTGTGTTCTACCCTTCGGAAGAGGAATTTAAAGATCCCATCGCCTATTACGAAAAAATCTTCCCAGATGTTATCAAATTTGGCATCTGCAAGGTGGTGCCACCTGCTGGTTGGAAACCACCTCCAACTGAGGTTAACGGCGAAGTCAAGTTCGAACCAATGCACCAATACGTACCCCGTCTCTTCAACCGCTGGGGGCCGGCCACGAGAGAGTACGCCGCTATCAAGATGTGTCTGTACAACCAGAACATCACCTGGACGAGACCACCTTGCCTAGATTGTGTGGAGGTAGATTTACCGAAACTATACCACACCGTGCAGCGGTTCGGCGGTCTAGAAACTGTATCTAACAAGAAGCGATGGGCCAAAGTGGGAGAAGAGATGGGTTTTCATGGCCCGCTTGGAAGAGTAGACTATATCTATATGAGATATCTGCTGCCATACGAGACGCTGACAGCTCGGGAGCGCCAGGAATCAATGCGACGTCTTGAGCTAGCatggaacaaaaaaaatcaaaagctgTTGGAACGTGCCAATAATCCGTTATTCAGACAGCAGAGAATGCTGGGAACATTGGACAGTTCTGACGAAGAGGAGGGCGCAGAAGATACTGACACCGCCTTTGCTCTCAAATCAGCAGAAGATTGCGTCCTGAAGGGTCAGGCTATGTTCCACAGTCGCTTTAAAAAGATCTCAACCTGTGTGCTCGATAACACGTTCGGGGCGGAGGCGGCCACTCTGACAACGAAGAAAGCCGAAGAGGTCTACTGGCAGCTCGTGACTTCGGGGGTCGAACACGCGTGCGTGCTCTCGGCAGCCATCGCCACCGACCAAGAATGCCACGGCTTTACTACAACGGAGGAACCGTATGCAAGCGATCCCTGGAATCCGAAGAAAATGATGGACGACAAACGCAACGTGCTACACTATTTGGGTCGACAGATGGGTGTCACGATGCCCACGTTGCTTATAGGCATGGTGTTCTCCACGTCCTGTTGGCACAAAGATCCTCATAAGGTGGCCTGGAACGAGTACCAGAGTAAGGGACCCACCAGGGTTTGGTACGCGATCCCCGCCGGACAGGCGGACAATTTTAGGATGGCTGTAGAAACACTCAGCCCCGTAGCTTGCCAAAACAAGGATCTGTGGCTGTCGTCAGAGAATATCATGATCCCGCCGGATGTCCTGCGCAAGCACAACGTGAGCCTGACGCGCATCACGCAGGAGGAAAACGAATTCATCCTGGCCCTGCCCGGCGCCTACACCTGCAACATCTGCACCGGCTACACAGAGGCCGAGAGCGTCTACTTCGCGCCGCCCTCGTGGCTCgacgacatgtgggaagtgttCAAAGTCGCGCGTGCCAATTGCGAACCGACGATGTTCTCCATGGAGCATCTACTGTACAAAATCGGGTGTGATGAAAATCCTGACCTGGAGATTCTGAAACGCGCGCTGCCGATATACGACCAGATGCTGCGCGATGAGGTCACTAACAGGCAGATTCTTCAGGAGCGAGGCCTGACTTTCGTGCAGAGGccttTAGACCTAAAAGAGCTGGAAAAAGCGATGCTGAAACCGCGCCCGTTACCGGAGTGCACTTACTGCCGCGCGACATTGTTCCTGTCCAAGGTAAGGGGGCTGCTGCCTGGCAAGGACTCGGAGCTGTGCCTGGAGCACACACGGTTGCTGCTGGAGTCGAAGAAGTACACTAAGAAGGACGTGACGCCGCTGCGCGTGTACATCCACGTGAGCGTGTCGGAGCTGAACAGGGTGCACGTCGCCATGCGCGCCCGCCTCGAGCGCATGACGGCCGCAGCGACCAAATAA
- Protein Sequence
- MSLLARLSATRFHCKGKKVEGPWGQPFATVALVVARSRRVQAQRKFAQGAYVPPNVTTLPTNDNRRDTNPETKNITINHMPATSLLDVVSLQRIQSQPVVLIERLGGRQISRDASPLLVEIRSKPITMKSGFKKAADTPKVHATRQNVEVIKRLHPMSLRSRRLSKLELNRLTARNSVFKRKRPAKRVSRTYSSDDEDEPLIFHKTRVAQIKKSSAASSHNNTSGMVSKQKSTKKLLVPRKITREVKKSRLLKQTSGKSAPQKRTAVGSTPEQYAGISVSVKAESVTSEEDNHLAMPSLNDQLTCDSFPDDLLYINGPDDLAAPEDPVATEIPVTPKVPVSVTKEVPMAAHIPAAPVVPAGADDDIEDYPVKPDGPYRLKATSDKTLPCYSYTDPGEFSDQSDIGGMSAVTAARLDEALCYLDDLPDADRESFYGSDNEVVKQCRERKKAQELENQRSLEAELANEDADAEESQDGLLLQMGKKSDSLKGKVLPDYDSDYSDSPNLVYESDSSEKCDEPKPVAKQNGTRLCNSPEPGPSGMQSNYSINTRKRSRDKLYESLLLENKHNGDSSDVPSSSNDVPCSSSSFNARRKLRKGKRTVAARGTDQDLIDKSEEQVDCRNGDPTDISPDNKAGPSRNKREPHNNEAGEQSDAGPYADIRIDNVQSIEIANLTDSDKPAAPKKSARFTSPASSSNNAERAKVLRARRDRAKITYQRQLTFKKRLAESKQDRIRKAHKKEIQVLEAKKQKEILRVMAENKDYEAEISRLHERFNQMLKNKETEFTRLAQQVREKTRAEMEADRRLFEEADNLASALDKEKDAKDMNAPESAAEEEPIPTGQLGGSLEEGPVFYPSEEEFKDPIAYYEKIFPDVIKFGICKVVPPAGWKPPPTEVNGEVKFEPMHQYVPRLFNRWGPATREYAAIKMCLYNQNITWTRPPCLDCVEVDLPKLYHTVQRFGGLETVSNKKRWAKVGEEMGFHGPLGRVDYIYMRYLLPYETLTARERQESMRRLELAWNKKNQKLLERANNPLFRQQRMLGTLDSSDEEEGAEDTDTAFALKSAEDCVLKGQAMFHSRFKKISTCVLDNTFGAEAATLTTKKAEEVYWQLVTSGVEHACVLSAAIATDQECHGFTTTEEPYASDPWNPKKMMDDKRNVLHYLGRQMGVTMPTLLIGMVFSTSCWHKDPHKVAWNEYQSKGPTRVWYAIPAGQADNFRMAVETLSPVACQNKDLWLSSENIMIPPDVLRKHNVSLTRITQEENEFILALPGAYTCNICTGYTEAESVYFAPPSWLDDMWEVFKVARANCEPTMFSMEHLLYKIGCDENPDLEILKRALPIYDQMLRDEVTNRQILQERGLTFVQRPLDLKELEKAMLKPRPLPECTYCRATLFLSKVRGLLPGKDSELCLEHTRLLLESKKYTKKDVTPLRVYIHVSVSELNRVHVAMRARLERMTAAATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -