Msep001184.1
Basic Information
- Insect
- Mythimna separata
- Gene Symbol
- rbr-2_1
- Assembly
- GCA_030763345.1
- Location
- CM061167.1:29223465-29228862[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-17 8e-14 52.8 0.0 11 89 151 223 143 223 0.87
Sequence Information
- Coding Sequence
- AtgcttaaaaataaagaaaccgAGTTTACTCGCCTCGCGCAGCAAGTTAGAGAAAAAACGAGAGCTGAAATGGAGGCAGATCGCCGTTTGTTCGAGGAAGCCGACAACCTGGCGTCGGCCCTAGACAAAGAAAAGGATGCTAAGGATATGAACGCTCCAGAGTCCGCAGCAGAAGAGGAACCTATCCCGACTGGACAATTGGGCGGGTCTCTAGAGGAAGGGCCTGTGTTCTACCCTTCGGAAGAGGAATTTAAAGATCCCATCGCCTATTACGAAAAAATCTTCCCAGATGTTATCAAATTTGGCATCTGCAAGGTGGTGCCACCTGCTGGTTGGAAACCACCTCCAACTGAGGTGAACGGCGAAGTCAAGTTCGAACCAATGCACCAATACGTACCCCGTCTCTTCAACCGCTGGGGGCCGGCCACGAGAGAGTACGCCGCTATCAAGATGTGTCTTTATAATCAAAACATTACTTGGACGAGACCACCTTGCcTAGATTGTGTTGAGGTAGATCTGCCGAAACTATACCACACCGTGCAGCGGTTCGGCGGTCTAGAAACTGTATCTAATAAGAAGCGATGGGCCAAAGTTGGAGAGGAGATGGGCTTTCATGGCCCGTTAGGAAGAGTAGACTATATCTATATGAGATATCTGTTGCCATATGAGACACTGACAGCTCGAGAGCGCCAAGAGTCAATGCGACGTCTTGAGCTGGCatggaacaaaaaaaatcaaaagctgTTGGAACGTGCCAACAATCCGTTATTCAGACAGCAGAGAATGCTGGGAACATTGGACAGTTCTGACGAAGAGGAGGGCGCAGAAGATACTGACACCGCCTTTGCTCTCAAATCAGCAGAAGATTGCGTCCTGAAGGGTCAGGCTATGTTCCACAGTCGCTTTAAAAAGATCTCAACCTGTGTGCTCGATAACACGTTCGGGGCGGAGGCGGCCACTCTGACAACGAAGAAAGCCGAAGAGGTCTACTGGCAGCTCGTGACTTCGGGGGTCGAACACGCGTGCGTGCTCTCGGCAGCCATCGCCACCGACCAAGAATGCCACGGCTTCACTACAACGGAGGAACCGTATGCAAGCGATCCCTGGAATCCGAAGGTACCCGGAACCGACTGA
- Protein Sequence
- MLKNKETEFTRLAQQVREKTRAEMEADRRLFEEADNLASALDKEKDAKDMNAPESAAEEEPIPTGQLGGSLEEGPVFYPSEEEFKDPIAYYEKIFPDVIKFGICKVVPPAGWKPPPTEVNGEVKFEPMHQYVPRLFNRWGPATREYAAIKMCLYNQNITWTRPPCLDCVEVDLPKLYHTVQRFGGLETVSNKKRWAKVGEEMGFHGPLGRVDYIYMRYLLPYETLTARERQESMRRLELAWNKKNQKLLERANNPLFRQQRMLGTLDSSDEEEGAEDTDTAFALKSAEDCVLKGQAMFHSRFKKISTCVLDNTFGAEAATLTTKKAEEVYWQLVTSGVEHACVLSAAIATDQECHGFTTTEEPYASDPWNPKVPGTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -