Msep027979.1
Basic Information
- Insect
- Mythimna separata
- Gene Symbol
- cnc
- Assembly
- GCA_030763345.1
- Location
- CM061193.1:5746292-5761229[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-13 2e-10 41.5 6.6 3 64 319 380 317 381 0.94
Sequence Information
- Coding Sequence
- ATGGATTTGACGGTGGCGAACTATGCGTATGTGCAGCCTCTATTTGCGATGGCGCCATATTTGAGAAGCCCTTTGTACTATCCGGATCCGGTTGAATATCTTAGTAGATATTACAAGTATTATGATGGCATGTACACGATGCGAATGCTGGACGGTGCCAGTGCGCACCACGCGCCGCATCACAACCACTCCCATATGATGATTACAGAGCGAGACTCAGCTTCCGACAGTGCCGTATCCTCGATGGGATCTGAACGCGTGCCATCTCTGTCCGATGGAGAATGGTGCGACGGGAGCGATTCTGCGCAGGAGTTTCATAGCTCAAAATTCCGGCCATACGACAATTCATTCGGACGAGAACGCGCGGCGCCGCATCAGGCACAGAAGAAACATCACATGTTCGGCAAACGATGCTTCCAGGAGCAGCCCGCTCCGCCCTTGGAGCCAGTCGGCAGACCGGGCGTCGTGAAGTACGAGTGCCCCGAACAGACGTACCATCACGATAGCATGCACATGCATAATGTAGAGTTCGCTCCGCGGCCGCAGCTGCCGCCGCCGCACGTCACCAACATCCACGGGCCCGCTCTGGACCTCAACACTGCGCACTCCAGCCATGCCTTACTACAGAGCAACATCCCCAGCCCGGCGCCGCCTCGCTTCGCATACGCAACACCGGAGCGCGTGCGACACAACCACACCTACAGCGCGCCCTTAGCTGCTGCCGACCAACGACCGGCTGCTGTGAGGGATAAGAGAGTGCGGCGTCTCACCGACGGCAGCATGTCGGACGGCGGGTCCTCGGCGACCAGCAGTGGGCAACATCTCTCCAGAGACGAGAAGAGAGCCAAAGCACTAGGCATCCCCCTGGAGGTGCAAGACATCATCAACCTTCCGATGGACGAGTTCAACGAGCGCCTCTCGAAGCACGACCTCAGCGAGGCGCAGCTGTCTCTCATCAGGGACATCAGGCGAAGGGGCAAGAATAAGGTGGCAGCACAAAACTGCCGCAAACGCAAACTGGACCAGATCACATCTCTCGCGGACGAAGTGCGCACAGTACGCGACCGCAAGATACGCACTCAACGCGAACACAGCTCACTGATCGCAGAACGGCAACGCGTCAAGGAGCGCTTTGCTGCGCTCTACCGACATGTATTCCAGAACCTGCGCGACCCTGAAGGCAGACCTCTGTCCTCCCAGCAATACTCTCTGCAGCAAGCGGCTGACGGCAATGTGGTGCTCGTGCCCAAGATGCCTCAGCACCaagACCACCCGATGAACCGCACAAACGATGACGATATGGACAGGAAAGCCAAAAGTTACGATCAGTGA
- Protein Sequence
- MDLTVANYAYVQPLFAMAPYLRSPLYYPDPVEYLSRYYKYYDGMYTMRMLDGASAHHAPHHNHSHMMITERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYDNSFGRERAAPHQAQKKHHMFGKRCFQEQPAPPLEPVGRPGVVKYECPEQTYHHDSMHMHNVEFAPRPQLPPPHVTNIHGPALDLNTAHSSHALLQSNIPSPAPPRFAYATPERVRHNHTYSAPLAAADQRPAAVRDKRVRRLTDGSMSDGGSSATSSGQHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKIRTQREHSSLIAERQRVKERFAALYRHVFQNLRDPEGRPLSSQQYSLQQAADGNVVLVPKMPQHQDHPMNRTNDDDMDRKAKSYDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039525;
- 90% Identity
- iTF_00809807;
- 80% Identity
- -