Msep011196.1
Basic Information
- Insect
- Mythimna separata
- Gene Symbol
- -
- Assembly
- GCA_030763345.1
- Location
- CM061175.1:20897708-20899132[-]
Transcription Factor Domain
- TF Family
- Nrf1
- Domain
- Nrf1_DNA-bind domain
- PFAM
- PF10491
- TF Group
- Basic Domians group
- Description
- In Drosophila, the erect wing (ewg) protein is required for proper development of the central nervous system and the indirect flight muscles. The fly ewg gene encodes a novel DNA-binding domain that is also found in four genes previously identified in sea urchin, chicken, zebrafish, and human [1]. Nuclear respiratory factor-1 is a transcriptional activator that has been implicated in the nuclear control of respiratory chain expression in vertebrates. The first 26 amino acids of nuclear respiratory factor-1 are required for the binding of dynein light chain. The interaction with dynein light chain is observed for both ewg and Nrf-1, transcription factors that are structurally and functionally similar between humans and Drosophila [2]. The highest level of expression of both ewg and Nrf-1 was found in the central nervous system, somites, first branchial arch, optic vesicle, and otic vesicle. In the mouse Nrf-1 protein, Swiss-Prot:Q8C4C0 there is also an NLS domain at 88-116, and a DNA binding and dimerisation domain at 127-282. Ewg is a site-specific transcriptional activator, and evolutionarily conserved regions of ewg contribute both positively and negatively to transcriptional activity [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-12 8.5e-08 33.2 0.0 113 209 3 92 1 96 0.88
Sequence Information
- Coding Sequence
- ATGATCGCCAACTTGCCGCTTCTTTTTGCTAACGGCAACCCGACACCGTTGTCGCAGATAACGGCTGCTGAGCTGGAGAAGTTCATAACATTTATGGTGACATGTTCCTGGGGACATGATACTGCGAAAGACATTCGTCAACCACCGTGGTGGCCGAAAGATGTCGCGTTTTCGCACCCCTTTGTGAGACCAAGCGAGGTGCCCAAGGATTGGGCCATGAAACTGAAGCTTTTGGTGAGGAAATGTTACGAGTACCACAAGAGCGCATTCCTGTTGGTGTTCTCCGCGCAGCTCGCGCGGTACCCGCGCAACAGGCTCAGGTACGTTGACAACAGAGACCACACCACTTCTCTGTACTACCGACCCTCCGGAAGACTGTTAGTAACATTTAGAAATGAGAATATATACTATGACAAAAGTACTTCCAAGACCATTGAAGACTCGCCAGTTAAATCTACTGATATTTATTTGTGTGATAATTGTGACAGCCACTTTGATAATCCAGACATACTGAGAGCACATGAGAGGCTATGTAATAATGAAGCAGTCCCAACAAGTACTATTAGCGGTGGCCTACCTGAGTTTCTTTCTGCCTTAAAACTTCTCCCGTTGGATCAAAAATTGGACAGTTCTGTAAATTCTTATATGGACACAGACGGTAAGCCTCAAAAGCAGCTTAGAAATTCTACGAGTATTGACCGGGGCCCACCATATCCATTTTCTTCGTTGGCTTACAGACGGAACGCTAAATTAAATAATCAGAGGGACTTGAGTTTCTCTAGGGAGAGGATTGAGCGGTACTGTTGCACCACAACTCCAttcaataaaaactataatgttaaagtaaaaaatcagCAGTTTCCTATAAGGTACAGACGACCCTTGAGCTACTGGAACAGACCTTATATATTTCCACATCAGAGAAAAAAAAGGGTAATTGATATTAAAGCTCAATTGCTTCTCCTTAAATGTAAACCGGTCACTGTCCGTGTAGATAGGATGTCAGAAGAAAGCATAGACGAATACCTCGAGAACTTGAGGAAAGTACGAGAGAGTAAACCGCAGTGTACGGAAGATAAGGACATTGTGTTTGTTGACGGGCTGGAGTGTGATCAGCCTGCTGACTCAGAGATGATGTTGGATCCATTGAAGCGTTTGGACAATGATTGTGAAGTGATTGACTTGTGTTCAGATGATGAGACTTCTAGTGTTAATGAGAACTGTGACCCTCGGGCCGGAGTGACGTGCGTGATGCGCGGGGGCGCGGTGCTGCGGCGCACGGCGGCCACGCCGCAAGCGCTGCCCGCGGAGCCGTGCGGAGCCCGCCAGCGCCCTCTACCCGCCGCCATTCTACAACCACATCCTGTCATTCTCATTGCGCACACGCATCCTCTGAACAATTTACAGACTATATCCATAGATTGA
- Protein Sequence
- MIANLPLLFANGNPTPLSQITAAELEKFITFMVTCSWGHDTAKDIRQPPWWPKDVAFSHPFVRPSEVPKDWAMKLKLLVRKCYEYHKSAFLLVFSAQLARYPRNRLRYVDNRDHTTSLYYRPSGRLLVTFRNENIYYDKSTSKTIEDSPVKSTDIYLCDNCDSHFDNPDILRAHERLCNNEAVPTSTISGGLPEFLSALKLLPLDQKLDSSVNSYMDTDGKPQKQLRNSTSIDRGPPYPFSSLAYRRNAKLNNQRDLSFSRERIERYCCTTTPFNKNYNVKVKNQQFPIRYRRPLSYWNRPYIFPHQRKKRVIDIKAQLLLLKCKPVTVRVDRMSEESIDEYLENLRKVRESKPQCTEDKDIVFVDGLECDQPADSEMMLDPLKRLDNDCEVIDLCSDDETSSVNENCDPRAGVTCVMRGGAVLRRTAATPQALPAEPCGARQRPLPAAILQPHPVILIAHTHPLNNLQTISID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00120224;
- 90% Identity
- iTF_01025699; iTF_00887941; iTF_01030858; iTF_01027980; iTF_01027030; iTF_01028950; iTF_00951526; iTF_01117985; iTF_00299878; iTF_00111310; iTF_00850318; iTF_00973455; iTF_01230227; iTF_00771609; iTF_00952442; iTF_01118970; iTF_01116891; iTF_00851421;
- 80% Identity
- -