Basic Information

Insect: Mythimna pallens
Gene Symbol: Hivep3
Assembly: GCA_961205895.1
Location: OY540851.1:7758814-7772080[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9 9.2e+02 1.6 0.1 1 9 61 69 61 78 0.77

2 12 0.28 28 6.4 0.4 1 23 200 223 200 223 0.96

3 12 0.015 1.6 10.3 2.6 1 23 230 252 230 252 0.98

4 12 2 2.1e+02 3.6 0.8 2 22 257 277 256 279 0.83

5 12 0.00026 0.027 15.9 2.3 1 23 290 312 290 312 0.98

6 12 6.3e-05 0.0064 17.8 0.1 2 23 317 339 316 339 0.96

7 12 1.9e-07 1.9e-05 25.8 0.8 1 23 346 369 346 369 0.98

8 12 0.031 3.1 9.4 3.8 3 23 378 398 377 398 0.97

9 12 9.4e-07 9.6e-05 23.6 0.1 1 23 409 432 409 432 0.95

10 12 0.00017 0.017 16.5 3.4 1 23 438 461 438 461 0.93

11 12 7.9e-06 0.0008 20.7 0.4 3 23 472 492 471 492 0.98

12 12 0.018 1.8 10.1 3.0 2 23 499 521 498 521 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9	9.2e+02	1.6	0.1	1	9	61	69	61	78	0.77
2	12	0.28	28	6.4	0.4	1	23	200	223	200	223	0.96
3	12	0.015	1.6	10.3	2.6	1	23	230	252	230	252	0.98
4	12	2	2.1e+02	3.6	0.8	2	22	257	277	256	279	0.83
5	12	0.00026	0.027	15.9	2.3	1	23	290	312	290	312	0.98
6	12	6.3e-05	0.0064	17.8	0.1	2	23	317	339	316	339	0.96
7	12	1.9e-07	1.9e-05	25.8	0.8	1	23	346	369	346	369	0.98
8	12	0.031	3.1	9.4	3.8	3	23	378	398	377	398	0.97
9	12	9.4e-07	9.6e-05	23.6	0.1	1	23	409	432	409	432	0.95
10	12	0.00017	0.017	16.5	3.4	1	23	438	461	438	461	0.93
11	12	7.9e-06	0.0008	20.7	0.4	3	23	472	492	471	492	0.98
12	12	0.018	1.8	10.1	3.0	2	23	499	521	498	521	0.92

Sequence Information

Coding Sequence: atgacgtCGTTTTTACACTTAAACGTACAAGATTATGTTTTTGAACAAAACGTTACAGAATTGAATAAAGTTTGCATTTGCTGCACGTCCCAAAATgctgttttagtaaaatttacTTCTTGTAAACACACGGGATTTTTGGTGAATTTCATAAAATCAGAGATTGATGTAAGAAACTCATACATCTGCAACATTTGCCATAACATGCTGAAAAAGATAGAAGCCTTCAAGCAGCAAGTTGAAGAGAGCACAGCATTACTCCTGGATCAGGTACCTATcctaaagataaacaaactttaCAATTTCCAACGTTCTCCGATGGAAATTGACGGCGTTACGGAGTCAGAAATCGAAGTGGAAGTGAAACCTGAACTGACAGAATCGGGATGTTTGGAAGTGGAAACTGACGTTAAAGTCGAGCACGATTCTTCTGACAATGAAACGGAACCTTTAGCGgaattaaaaaagaagaagaaaaaaaagacgaaGAATGAATTGAGATATGAAGGGAAGATAGGAATCGTGATATTAACTGAGCAAGAACTGAAGGAAGAAAGAGAACGCATGGCTAAAAGCGAGGGATACTTGAAGctaccttacaaatgtgaagactGTATCGTTGGGTTCGATCACGAGCTCACGCTGGTCAGCCATATTGAAAAGAGACATAAGAAGaTGAAAAATGGTTTCCAGTGTCAAGTTTGCAAGTCGGTGTTGAGCACTAAGTTTTCTTACAATGAACATACAAAACGACACATCAGAagATTGGAGTGCATGATATGTCGAAAGAGGTATAATCACATGCAGTCAGCGGTTCAGCACTATGATGAACAGCACGCTCCAGCTGGAGCTGGCATACAGCAAGGTTACACCTGCAAGGAGTGTGGGTTCACTACCACTTCAAACCGAGCGTACCGTTACCATATGGACAAGCATAAGAAGAAACAGAGCTGTGATATATGTGGGAATATGTTCGTGAACAGCAACGGACTCAAAGTTCATATGTAcACAGTCCACAAACAATCCTCTCGCGTCTACAAATGCGAGCAATGCAACAAATCATATCGCTCGCGTTCCGGTCTGGAAGCGCACCAGCGTTCAGCACACGGCACTATAGACACGCGCGCGTTCTGCGTGCTCTGCAAGACGCACTATAGCACCGCACAGGGACTGCAGCATCACTTGAGCACGCACTCTCGACACGTTAGTGAGAGTGATAAGAGGTTCATTTGTGATGAATGCGGAGCCAAGTTTGTGACGAAGAGTAACCTGCAAGTCCATATCAACTGGGAACACTTCAAAATCAACACGCATCGATGTACTAAGTGTACCAAGATCTTCAAAAGTCGGAACGCACTCAACCGTCATGTCACCTACGTCCACAACAAGAAGAGACCGCCCCGCAACAAGATCTGTGACTACTGTGGAAGAGCCTTTACTactcaAACAATTCTCCAGTCTCACATCCGAACGCACACAGGAGAGAGGCCGCTACACTGCACGCACTGCCCCGCAACGTTCGCGCATTCTGCCGCGTTGTATACTCATAACAAATTACTACATACTCCCAAATAA
Protein Sequence: MTSFLHLNVQDYVFEQNVTELNKVCICCTSQNAVLVKFTSCKHTGFLVNFIKSEIDVRNSYICNICHNMLKKIEAFKQQVEESTALLLDQVPILKINKLYNFQRSPMEIDGVTESEIEVEVKPELTESGCLEVETDVKVEHDSSDNETEPLAELKKKKKKKTKNELRYEGKIGIVILTEQELKEERERMAKSEGYLKLPYKCEDCIVGFDHELTLVSHIEKRHKKMKNGFQCQVCKSVLSTKFSYNEHTKRHIRRLECMICRKRYNHMQSAVQHYDEQHAPAGAGIQQGYTCKECGFTTTSNRAYRYHMDKHKKKQSCDICGNMFVNSNGLKVHMYTVHKQSSRVYKCEQCNKSYRSRSGLEAHQRSAHGTIDTRAFCVLCKTHYSTAQGLQHHLSTHSRHVSESDKRFICDECGAKFVTKSNLQVHINWEHFKINTHRCTKCTKIFKSRNALNRHVTYVHNKKRPPRNKICDYCGRAFTTQTILQSHIRTHTGERPLHCTHCPATFAHSAALYTHNKLLHTPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01118631;
90% Identity: iTF_01031370;
80% Identity: -