Mpal026040.1
Basic Information
- Insect
- Mythimna pallens
- Gene Symbol
- -
- Assembly
- GCA_961205895.1
- Location
- OY540846.1:17350972-17353650[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-10 6.8e-08 33.1 0.0 2 37 41 75 40 82 0.89
Sequence Information
- Coding Sequence
- ATGAGACCGAAGTGTAGTGCTATATGGACGTACTTTAATGAAGTTGACGATGAGACTGTGCGTTATAATATGCCTTTAATATATAAGAGGAAAAGTGGAGTATGTAGAGGAGAATGGACAGAAAGAGCATTAATTGATGCTTTTCAAGCTGTTTCTAATGGAATGGGTATCAATGAAGCAGCAAAAACATTTGGGATACCTAAAACTACATTTAAACGAAGACTTGCAAAAAATTCCTTAACTAAAAGCGATGTTCTCGGTCCCAGTGGTATACTGCTGCCTGAAAATGAGAAGAAGATCGTCGTacacattaaaaaattacagaaaagtgGGTTTACGCCATCAAGAGAAACAGTGCGTAAAATGGCATATAATTTAGCGGAAAGACTTCATATTAAACATAACTTTAATCACGAAAAGAAAATGGCGGGAAATGGGTGGTTACAAAGCTTTCTTAGACGAAACATTGAACTTTCAATCCGGCAGTCAGAAGGTGTCTCTGTGGCCAGGGCTAAGGGGATGAATAAAGAATATGTTGATAAGTATTTCAACCTTTTAGAAGAAGTTTTGAAAGAAAATCAACTTTTTGACAAACCTGgttctatttttaatatggaCGAGACAGGCTTGCAGCTAAATAATAAGCCGGGGAAAGTAGTTGCCGTGAAGGGATCGAAAAATGTTCCTAACATAACTGCTGGGGAAAAAGGTGAAACCATTTCGGTCATCGCTTGCTGCAGTGGAGAAGGTGTTTTTCTTCCACCCTATTGCATATTCaagggcaaaaataaaaaacctgagTTTAAGGATGGCATGCCACCCGGCTCTGTGGtaacaatgtcacaaaaatcaGCATATGTGaattcagaaatattttttgattggCTGAAGCATCATTTTTTGCCAAGGAAACCACAAGGTAAGTGCGTGTTGATCCTTGATGGACATTCTTCACACTGCAGCAATGTGGAAATGTTGGAGTTTGCTGAAGAAAACGAAATCATTTTGATTTGCTTACCCAGTCACACAACCCATTTTCTTCAGCCGCTTGATAGAACGTTTTTCAAGTCCCTGAAATGCTTTTATTATGACGAATGCAATAAATTCATTACTGCTAACCCATCAAGAAAACTATCACGCTTGCAGTTTGGAAAAATTCTGGCTTCAGCTTGGAATAAATCAGCTTCAGTGAGCAATGCAATATCAGGTTTTTCAGCAACTGGGATCATACCGTTTAATGCAAACGCCATACTAGACTATGCTTTCTTAACTCCAAGTAACCAAAACCATGACAATAACCTACAAACTGCTGCTATAATTCAACATGATCAACCTACTAAAGAATCAGTCCTTTCACAGCCAGCAACCGTTCAAAAACCATCAACTAGTGAAGCTGTTTCTCCAAAGGCAACGCCTGGAAAGATTTTGGATGTGGTTTCTCCAATACCTATCATAGAAAGAACTGCAAACGTCCGTCATAGGTCAAGAAAAATCGCAGAAATTTTGAACTCTACTGAAAATATTcagaatttaaaagaaaatcaatcaaggaaaatgaaaaaagaaaattctatTGAAACTAAACAGATTTTAAAAGTAACACGGAAAAAGAAGGGAACTAAAAGACAAAATTctgcaaagaaagaaaataaaagacagaaaaaacaaaaaattgaagaCAGTTCGGATGAAGATAGTGAACAAGAGATTATAACTCTGCGTGATAGTCCTGAATTGACTGAGTGGGAGGACAACGAATGTGCAGGCTGTGGTGAAAACTATGAGGAAACCCTGAGTCAAGATGAATGGCTGCTGTGCATTATTTGTGAACGCTGGTCCCATGAAGGCTGCACCAATTATCCCGATATGTGCGACCGATGCAGAAATACGGTGAAAAACTGA
- Protein Sequence
- MRPKCSAIWTYFNEVDDETVRYNMPLIYKRKSGVCRGEWTERALIDAFQAVSNGMGINEAAKTFGIPKTTFKRRLAKNSLTKSDVLGPSGILLPENEKKIVVHIKKLQKSGFTPSRETVRKMAYNLAERLHIKHNFNHEKKMAGNGWLQSFLRRNIELSIRQSEGVSVARAKGMNKEYVDKYFNLLEEVLKENQLFDKPGSIFNMDETGLQLNNKPGKVVAVKGSKNVPNITAGEKGETISVIACCSGEGVFLPPYCIFKGKNKKPEFKDGMPPGSVVTMSQKSAYVNSEIFFDWLKHHFLPRKPQGKCVLILDGHSSHCSNVEMLEFAEENEIILICLPSHTTHFLQPLDRTFFKSLKCFYYDECNKFITANPSRKLSRLQFGKILASAWNKSASVSNAISGFSATGIIPFNANAILDYAFLTPSNQNHDNNLQTAAIIQHDQPTKESVLSQPATVQKPSTSEAVSPKATPGKILDVVSPIPIIERTANVRHRSRKIAEILNSTENIQNLKENQSRKMKKENSIETKQILKVTRKKKGTKRQNSAKKENKRQKKQKIEDSSDEDSEQEIITLRDSPELTEWEDNECAGCGENYEETLSQDEWLLCIICERWSHEGCTNYPDMCDRCRNTVKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00448998; iTF_00121355; iTF_00973707; iTF_00121356; iTF_00837420; iTF_00973708; iTF_00837421; iTF_00906065; iTF_00906066; iTF_00147350; iTF_00836471; iTF_01525879; iTF_00836472; iTF_00383577; iTF_00383578; iTF_00771834; iTF_00851706; iTF_00771835; iTF_00147327; iTF_00837424; iTF_01029173; iTF_01085081; iTF_00281115; iTF_00281114; iTF_00000252; iTF_00836477;
- 90% Identity
- iTF_00000252;
- 80% Identity
- -