Basic Information

Insect: Mythimna loreyi
Gene Symbol: ZFP42
Assembly: GCA_029852875.1
Location: CM056796.1:13210483-13218387[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0011 0.094 14.1 1.1 1 21 48 68 48 69 0.95

2 13 2.9e-05 0.0025 19.0 3.0 1 23 85 108 85 108 0.97

3 13 0.0045 0.4 12.1 2.9 2 23 116 138 115 138 0.95

4 13 5e-05 0.0044 18.2 1.9 1 20 143 162 143 164 0.94

5 13 1.8e-06 0.00016 22.8 0.3 1 23 175 198 175 198 0.97

6 13 1.2 1.1e+02 4.5 6.3 1 23 204 227 204 227 0.95

7 13 0.017 1.5 10.3 3.1 1 23 234 256 234 256 0.98

8 13 0.94 82 4.8 0.1 1 23 261 283 261 283 0.96

9 13 1.4e-06 0.00013 23.1 0.5 1 23 289 311 289 311 0.98

10 13 0.00016 0.014 16.7 0.3 3 23 316 336 315 336 0.98

11 13 0.49 43 5.7 0.0 8 23 354 369 344 369 0.90

12 13 1.3e-05 0.0011 20.1 2.1 1 23 375 397 375 397 0.98

13 13 0.69 61 5.2 0.7 3 23 405 427 404 428 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0011	0.094	14.1	1.1	1	21	48	68	48	69	0.95
2	13	2.9e-05	0.0025	19.0	3.0	1	23	85	108	85	108	0.97
3	13	0.0045	0.4	12.1	2.9	2	23	116	138	115	138	0.95
4	13	5e-05	0.0044	18.2	1.9	1	20	143	162	143	164	0.94
5	13	1.8e-06	0.00016	22.8	0.3	1	23	175	198	175	198	0.97
6	13	1.2	1.1e+02	4.5	6.3	1	23	204	227	204	227	0.95
7	13	0.017	1.5	10.3	3.1	1	23	234	256	234	256	0.98
8	13	0.94	82	4.8	0.1	1	23	261	283	261	283	0.96
9	13	1.4e-06	0.00013	23.1	0.5	1	23	289	311	289	311	0.98
10	13	0.00016	0.014	16.7	0.3	3	23	316	336	315	336	0.98
11	13	0.49	43	5.7	0.0	8	23	354	369	344	369	0.90
12	13	1.3e-05	0.0011	20.1	2.1	1	23	375	397	375	397	0.98
13	13	0.69	61	5.2	0.7	3	23	405	427	404	428	0.81

Sequence Information

Coding Sequence: ATGGCACCGAAACGAAAGAAGGTAGGGCGACCGCCTGGGGCcaaaaataagcaaataaaaacaTCTAACAAAAACCTGGTGAAAAACAATTCATACAGTGTTGTGATTATGAAGCAGGAAAAGGGGACAACAGATGTTGAATACGTCTGTAACGTTTGTAATAAGACTTTCCAAACAGGAAAACAGTTATTGATACATCATAAACGATGTCGCGCCTTAGAATATACTGAAATGGTTTTCTCGAAGGCAACATACAGTTGCAAGGAGTGCCCCAAAAAGTTCAGGTTTAAGACAAGTTTCACAGAGCATCTTCGTAACGAGCACTCTAAGCTACCTACCAGTGTTTCTTGTGATAAGTGCAATGTCTGTTGTCCAGATAAGAAGACTTTGATCAATCACATAAAGAATGTTCATGAGAGACTTATCTTTGCGTGTACACACTGCAAGCGAACATTTGTCCGGCGCTCACATGTGCTTCGGCATATGGCACAGAGTGGATGTGATGGACAAGGACAAGCCTCATTTAGTTGTGaaATTTGTGAAGCAAAGTTTTCCAGAAAAGACAATTTAATGGTCCACATAAGGTtgcaacatattttaaaaacagcTTTTAATTGCAAGCACTGTCTATTCTCAACAAAGAATTTTTCCAAATTGGTTAACCATTGGCACAAAGAGCATGCAGAAACACCTGACCAGTACCAGTGTCACCACTGTAGCAAGTGGACCAGCTCCCGAGCCGCCATGACCAAACACCTGGAAATACATGGCGAAAAGAAATTTGTGTGCGATGTGTGCGCTTACAGCACGTTCACGATCGAGGTGATGCGGCGGCACGCGCTCACGCACGTCGCGGAGAAGCCGTACAAGTGCGCCGTGTGCGGCAAGTCGTACATCCAGCGCGTGCAGCTGCAGCGCCATCTGGACAAGCACACCGGTAACCTCTGCAGCAATTGCGGTGCCACCTTCTCTTCCAGAGCCAGGCTGCTGATTCACATGAGAGAACATATGGGATTAGATAAGTTATTTTGTCCTGTGCCGTCTTGTACATACTCCACAAAAGAATTCATCAGTGAAACTAGTTTGGAAAATCATTTGAAAGTGCATTTAGATGACAAACCATACAGTTGTGAGGTGTGCTCTAAGACTTTCCACTCAGAGGTGAACCTGCGGCGGCACTTGGACACGCACACGCTGGACCGGCCGCGGCGCTGCATGTACTGCGTGTCGGCGCGCGCCTACGTGCGCGGCGAGCAGCTCATCCGCCACGTGCGCAAGCACCACCCCACCGTGTTCAAGGGACACCTGCAGCACGTGCGCAGCGTGCTCgGTATCGACAATTCAGTGGAAAGAGTGAAGAAGTCTGAAATAGAATCTATAGTAAACTTATTAGATGCCGAGTCGGATCGTATTCTTCAAGGCTACAGCGGCTCAGGCGTACTCTACGGCGGTATGCAAGACGAGCAGAGCAGTTCTAGTAGCGAACCTCAAAAGAAAGGAAATATTTCCCCAATATCAGCTGAGGATGAGCTCACGGAGAATTTAAAACTCTTACTTTCACACCTTATTGATGAGGAGACACTTGATTTGTTTGGTTGGCCTGACGAAAGTGTAGACGTGATATTAGAAAAAGTGATCGAGCAGTGTGGTGCTAAGCCCGCAGACCGCGAGAAATGGACACGAGTACAGCGCCTGCGAGAAAACTCCAAGCATTTGTTCTTATACGTGATCGAAGACAAGAACATCGCGCGCATGCTCGACACACACACCATAGATCAAATCGTCAAACACATCCTCAAACAGGTCAGCGAGGATGATACTAAGGAAGTTGAAGTTGACAGCATGAAGTAG
Protein Sequence: MAPKRKKVGRPPGAKNKQIKTSNKNLVKNNSYSVVIMKQEKGTTDVEYVCNVCNKTFQTGKQLLIHHKRCRALEYTEMVFSKATYSCKECPKKFRFKTSFTEHLRNEHSKLPTSVSCDKCNVCCPDKKTLINHIKNVHERLIFACTHCKRTFVRRSHVLRHMAQSGCDGQGQASFSCEICEAKFSRKDNLMVHIRLQHILKTAFNCKHCLFSTKNFSKLVNHWHKEHAETPDQYQCHHCSKWTSSRAAMTKHLEIHGEKKFVCDVCAYSTFTIEVMRRHALTHVAEKPYKCAVCGKSYIQRVQLQRHLDKHTGNLCSNCGATFSSRARLLIHMREHMGLDKLFCPVPSCTYSTKEFISETSLENHLKVHLDDKPYSCEVCSKTFHSEVNLRRHLDTHTLDRPRRCMYCVSARAYVRGEQLIRHVRKHHPTVFKGHLQHVRSVLGIDNSVERVKKSEIESIVNLLDAESDRILQGYSGSGVLYGGMQDEQSSSSSEPQKKGNISPISAEDELTENLKLLLSHLIDEETLDLFGWPDESVDVILEKVIEQCGAKPADREKWTRVQRLRENSKHLFLYVIEDKNIARMLDTHTIDQIVKHILKQVSEDDTKEVEVDSMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01026611;
90% Identity: iTF_00888533;
80% Identity: -