Basic Information

Insect: Mythimna loreyi
Gene Symbol: ZNF296
Assembly: GCA_029852875.1
Location: CM056807.1:12254010-12270662[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.3 1.2e+02 4.3 0.2 3 23 124 144 122 144 0.93

2 15 0.0023 0.21 13.0 2.8 1 23 347 369 347 369 0.99

3 15 3.6e-05 0.0032 18.7 0.4 1 23 375 398 375 398 0.97

4 15 0.0046 0.41 12.1 1.6 1 23 403 426 403 426 0.94

5 15 0.00043 0.038 15.3 0.9 3 23 617 637 615 637 0.97

6 15 0.00018 0.015 16.5 3.2 1 23 643 665 643 665 0.98

7 15 1.3 1.2e+02 4.3 5.1 1 23 733 755 726 755 0.97

8 15 0.06 5.2 8.6 0.1 2 23 763 784 762 784 0.97

9 15 0.023 2 9.9 2.2 1 23 790 812 790 812 0.96

10 15 0.0023 0.2 13.0 1.7 1 23 818 840 818 840 0.98

11 15 0.002 0.17 13.2 5.0 1 23 849 871 849 871 0.99

12 15 0.0068 0.59 11.5 2.1 2 23 917 938 917 938 0.97

13 15 0.015 1.4 10.4 3.8 1 23 955 977 955 977 0.96

14 15 2e-06 0.00018 22.6 0.7 1 23 983 1005 983 1005 0.98

15 15 2.1e-07 1.9e-05 25.7 3.1 1 23 1011 1034 1011 1034 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.3	1.2e+02	4.3	0.2	3	23	124	144	122	144	0.93
2	15	0.0023	0.21	13.0	2.8	1	23	347	369	347	369	0.99
3	15	3.6e-05	0.0032	18.7	0.4	1	23	375	398	375	398	0.97
4	15	0.0046	0.41	12.1	1.6	1	23	403	426	403	426	0.94
5	15	0.00043	0.038	15.3	0.9	3	23	617	637	615	637	0.97
6	15	0.00018	0.015	16.5	3.2	1	23	643	665	643	665	0.98
7	15	1.3	1.2e+02	4.3	5.1	1	23	733	755	726	755	0.97
8	15	0.06	5.2	8.6	0.1	2	23	763	784	762	784	0.97
9	15	0.023	2	9.9	2.2	1	23	790	812	790	812	0.96
10	15	0.0023	0.2	13.0	1.7	1	23	818	840	818	840	0.98
11	15	0.002	0.17	13.2	5.0	1	23	849	871	849	871	0.99
12	15	0.0068	0.59	11.5	2.1	2	23	917	938	917	938	0.97
13	15	0.015	1.4	10.4	3.8	1	23	955	977	955	977	0.96
14	15	2e-06	0.00018	22.6	0.7	1	23	983	1005	983	1005	0.98
15	15	2.1e-07	1.9e-05	25.7	3.1	1	23	1011	1034	1011	1034	0.98

Sequence Information

Coding Sequence: ATGAACCACGCAACCGCAATGCCTGGCAACATGGACATTGATCCCCTGAGCTCGTACGACTACCCGGCCTACGACAGCTACGCAGCTCAGTCCTACCCGTACCCCAGCAAGCTGCAGCAATCCATCTACCAGGCATACCAGCAGACACAGCCCAACTACGTGAACAACTCACAGCCACAGGAACCCTTCACTAACCCACAACCAGCACTACAAACACAGCAAACTGTAGAACCAGAAATCGCTCCCAAAACTGAAACACAGGAACCAGAAATAAAACCAGCTTTGAAACGGCGAAAAAAGGAGAAAAATGGCCAAAAAAGTGCTTATTGTTCTGAGAAAATCAGAGATTCTACTTTCAAATTCTACGGCTGTTCCGTCTGTAATATCAGCTACAACGCTCTTCATGAACTAGACCAACATGTGACCGCACACAAGAATAGAATGACTAGCTACAGGCTACGGCtaagaaatcaaataaaaaagaaacagataaaaaaagaaaagaaaaagttaaaaaagatggtgaaaattaaaaaagaaattgatatagAAATTAAGCCAGAAGACGGTTATATTGGAGAAGAGAGAGCCGCAGATTTTATGAGCAACGGAATGAATCCTATGGAACTTAATGAGAATGGCAATAATGCTGAGTTTAATGGAATCAATCCTAATATGCAAATTAATGACAGTGTCAATAATGGAATTATTCCCAATAATGAGTTTAAGGGAGCGAATTCTAATATAGGAGTTAACGAGAGTGTCATTAATGGAACGATTCCTAACGCTGAGTGTAACGGAATCAACTCTACATTAGATTGTAATAACGGATTAGTAATAAATAGTGAAAATAGTGTCGTAGAGGCACAAAATAGTCAGAATCATACAGAAAATCATTTGAGTTCTATAGCCAATGATCCTCAGGGTAATGAAAATAGTTCTTCGACGAACGGTAGCAGTGAAGTAGATGCTAATGCTAACAGTAAGGATAAAGAGAATAGTTTGGACGAGGCAGAGCTGACCAACTTAGAGAAAATTTACAAATGTTTTGCGTGCCAGAAACAGTTTACGTTGAGTTATTATTTGAAACTGCATGTGAGATCACACACTGACGAGAAGCCGTACACGTGCAGCGTGTGCGGGCAGTCCTTCATCACGGCGAGCAAGCTCGGGCGCCACAACAAGCGCATCCACCTGGCCGAGCGCTACCAGTGCCGCATCTGCTTCAAGATCTACTCCAGGTTCGAGTTGCTGACGGCTCACTTCGACAAGACACACCCTGAAGACAAGTTGGAGGGCGAACCCTATGACTACAATGCAATCCTGCCATACCTCAAAGAGTTGGAGGAGCAGCTCCGAGCGCCAGAACAGGCCAGCGCCACCGAGCCGGCGTGCAAGTTGGAACAGGACGACAAGCCCAAGGCTGAGGAGCTGTTCTGGGAGGCGGAGGTGGGCCCGCACCAGCTCAGCGCGCCTCTGCTGGGGATGCCCACGGATGTTAAGGAAGAGACACTAGACGAGGACCAGAAAGACTTAGTCCCGAAGATAGACATCCTCGTTGAAGAGGTGAAGGTGGACTTCGATGTgtcggtcaagcgcgaactgtCCGACGACGAGGGCGCCGCGGATGTGGCGGATGTCGCGGATGTGGCGGATGTACCGGATGTACCGGACGACGCGGATGACGCGCCGGCCGACGCGGATGACAGGGGACAAGTCAAGGATGAGGACAGCGCATCAGACGAGGACTACTTCCCGTCCAACACGTGGACGGCGCCGCGAGCACCGTCGCCGTCGCTGCCGACGCCGGTGTCGGCgccggcgcggcggcgcggcggcgcgctGGCGTGCGAGGTGTGCCACAAGCGCATCAGCAGCGCGTCGTACATGCGCGTGCACCTGCGCACGCACTCGGGCGAGAAGCCCTTCAAGTGTCGCCAGTGCGGACGCGGCTTCATCACCAGCAGCAAGATGCATCGACATGTGCTCACGCACGCGCAACCAGACAAAGACGAAGTGAAGACGGAGGGAGAGGACGCGAAGCCTGAAGTAGACGGTGACGCCGAGGAGTTGCCGGTAGAAGATGGCGCTAAGAAACCCGCCAAGAAGAAATCTAAAATGAAGTCGAAGTCGTCGAAGTCTGCCCAGCTGAAGTCGCGTGAAGAGAAGCCGCGGCGCAAGCATCAGAAGAGGCCGCACGCCTGCGAATACTGCAACCAGAAGTTTTTGCACCTGAACATGTTAGAGGTTCACAAGCAGTCGCACTCGGGTGAGGCGCTGGTGCTGCGCTGCCACTACTGCCTGCAGGACGCGCCCGACCAGGCGGCGCTGCAGGAGCACCAGGCCACCCACCAGGGGGCCAAGCCCTACCTCTGCACCGTCTGCGGGAACTCCTACAAGAAGAGAGAGACCATGATGTACCACCGCAAGCGCCACCTGCCGGACAAGGAGTTCGTGTGCGACATCTGCTCCAAGCGCTTCAACGCGGCCTGCAAGCTCAGCAAGCACCTCGTCACGCACCGCGCCGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACGCAGTACCACGTGCACATGCACCTGCGCACGCACCAGAAGGAAGGCCTGATCTTAGAAGAAAACCGCAGCGAGATCCTAGCGATGGTGCTCCAAAACGCGCGCAAGATCCCCAAGCAGGCGTCCTCCCCTCTGTCCCTCACGACTGTACCTCCCGACGAGCGCTCCCGCGTGTGCAACATATGCGGCGAACTGTTCCACCACTTCTACTATTTAGAGGAACACCTCAAGAGCCACGCTTCTACCATCGCCATCACCGACATCGAAAAAgaagacgaaaaaaaatatatctgccAGGTTTGCAATAAAGGATTCAAACTGCACTACTATCTCAAACTCCACAGTTTTACGCACTCAAAAGAAAAACCGTTTATCTGCCAACAGTGCGGAAAAGGGTTCATTACTAAAGGCAAGCTCAAACGTCACTTGGAAACACACACGGGGTTAAAGAAATACCAATGTCACATTTGTTATAAGTTCTTCACAAGGCCAAGTTACTTGCGAATACATATTCGTACGATACATGGCACTCAAGATTATAATTTCAGGTTTGACAAAGGTTATGTAGGGTCGTTGTCAATGAGCGCTATGACAATGTCAGATGTCAGTCAGAACAGTATATGA
Protein Sequence: MNHATAMPGNMDIDPLSSYDYPAYDSYAAQSYPYPSKLQQSIYQAYQQTQPNYVNNSQPQEPFTNPQPALQTQQTVEPEIAPKTETQEPEIKPALKRRKKEKNGQKSAYCSEKIRDSTFKFYGCSVCNISYNALHELDQHVTAHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMVKIKKEIDIEIKPEDGYIGEERAADFMSNGMNPMELNENGNNAEFNGINPNMQINDSVNNGIIPNNEFKGANSNIGVNESVINGTIPNAECNGINSTLDCNNGLVINSENSVVEAQNSQNHTENHLSSIANDPQGNENSSSTNGSSEVDANANSKDKENSLDEAELTNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAPEQASATEPACKLEQDDKPKAEELFWEAEVGPHQLSAPLLGMPTDVKEETLDEDQKDLVPKIDILVEEVKVDFDVSVKRELSDDEGAADVADVADVADVPDVPDDADDAPADADDRGQVKDEDSASDEDYFPSNTWTAPRAPSPSLPTPVSAPARRRGGALACEVCHKRISSASYMRVHLRTHSGEKPFKCRQCGRGFITSSKMHRHVLTHAQPDKDEVKTEGEDAKPEVDGDAEELPVEDGAKKPAKKKSKMKSKSSKSAQLKSREEKPRRKHQKRPHACEYCNQKFLHLNMLEVHKQSHSGEALVLRCHYCLQDAPDQAALQEHQATHQGAKPYLCTVCGNSYKKRETMMYHRKRHLPDKEFVCDICSKRFNAACKLSKHLVTHRADKFVLRYECPVCAHMFNTQYHVHMHLRTHQKEGLILEENRSEILAMVLQNARKIPKQASSPLSLTTVPPDERSRVCNICGELFHHFYYLEEHLKSHASTIAITDIEKEDEKKYICQVCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNFRFDKGYVGSLSMSAMTMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952075;
90% Identity: -
80% Identity: -