Basic Information

Gene Symbol
-
Assembly
GCA_029852875.1
Location
CM056803.1:6185578-6193121[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.38 5.3e+02 1.7 0.4 3 14 74 85 73 128 0.86
2 7 0.011 15 6.7 0.0 21 44 344 368 336 370 0.86
3 7 0.0014 2 9.5 1.1 13 45 432 469 417 470 0.67
4 7 0.0049 6.8 7.7 0.2 22 46 583 617 571 617 0.74
5 7 0.0014 1.9 9.5 0.2 3 43 668 717 666 720 0.80
6 7 4e-05 0.056 14.4 0.2 13 42 849 885 834 889 0.79
7 7 0.046 64 4.6 0.1 3 15 1044 1056 1042 1103 0.80

Sequence Information

Coding Sequence
atGGATGGTTCTATAGTGGTGAAAACTGAGATGGGGACTAATGGGGAAATTTTACTTTTCTATGTAGATGaaAACGGTGGCAATGAAGAAGGGGTTCTGACAACTGTAGAAAGCATAGAAAACCAATCAATACAACTGCAGCAAGACAACTCCTACATAATTCAAGAAGTTGGAGATGACTCCCATGAAATCAGTACTGATCAATCAGCGGAAATTGACGACTGGACCGAAGATGAAACTAAAAGACTCCTGGTTTTCTACAATGATAACAAGCAGACATTTATATCAGGaacaacaaagaaaaaacatctTTGGACCGTAGCATGCAAAACCATGCTTGTTGGTAAAAACCCAAACGCATGCGAAGCAAAACTCAACAGTTTACAATCAAAGTATAATACAATTTGTGGCCACATACAGAAAGGGGTCTACGTAAAGTGGCCGTACTTTGAACTGTGCCATCAAATATTTCACGATGAGACCCCTATGATAACAGTTGAAACCTTGAACACACCAGAACCACAAATAATCAAAGTCCCAGCTGtcaaacaaaattatgacaatgTAATGGTGGTTAAAAAGGTGAACAGTCGTTCTACGGCTGATGAGAAAGTTGAAATGATGTTGAACTTGTATTTGAAGTACAAGAAAAACTTCCAAGCAGAATATTGGCGACGTGGCATATGGGAAACCATTGCGTTAGAGATTGGAGAAGACGACGGAGAATACTGGCAAAAAAGGTTCTTGAATTACAAGCAACATTACCTAAGATTGATAGACAAGAGACGGGAAAGTGGCTCAGAGGGCATCAACTGGCCTTACTTGGAACTATTCGACAAAATCTTTGAAGGTGATGAAGACTTTCATCGGAAATATCTAACTGAGGAATACAGACTTATTGAAAACCAGGCAATTGCAGAAATTGAAGAACCTGCTCCTAAAGTTATAGATTGGGATACAACTGAAATGACTGTATTAGTAAAATACTGTTTTGACTGCTTTGACGAATTTGAAGACAAAACCATTCCGAACAATTTCCTTTGGACTGAAATTGGCCGTTTGCTCGACAAGACCGCTGATGCTTGCAAATCAAAGTATGAAGAATTGAAGGACGAACATTTAGACAAATACATACAGGGTGGTTACGATTTGCGTACAAGAAAACccattgaaatattatttgacaatttaataTCTAAGAGGATTGAGAGTCAGATACTGAAAAGTGGTAAAATACCAGAGCAACTGGAAAGGTGGAAGACAGAAGAATTGGATGAACTTGTGCAATTCTTCTATGACAACATTGAGATGTATAAAGACCTTGTCTGCCATTTTGTGTGCTGGGCAGGAGTTTCCAAGAAGTTGAAGAGAACACTGCTAAGCTGCAGAAGCCAATGGGAGGATCTTTTAATGCTATATAGGACTatattgaatgataaaaaagaaaatccttATATGCAGATTGATTGGCGATATATTGAAGTTTTTGACAGGATATTTGACTATGGTATGGATACCAGCCTGCTTTCTGGGTATGAAACCTTGAAAGGATTTGGACAGAGTCAGAAAAGTGATGCTGGGAAGATTGGTGttaaaaaagtaaatatcaaACTGGACGAAACCTTGGAAGAATTTACGGACGATGATGAGTCGTACGACGAACGTGGCTTCACGAAACGCACTAAACGCCGCTCCGGAGACTCCAAAGCGTTCAAGATCCTCGAATACTATCAGAAAAACAAGGACAAGTTCTCTACCACAAACAGGAACAAGCATTCACTGTGGGACATACTAGCTAAACAAATTGGCATTTCTGCTACACAATGTGCCCATAGATTCAGAAATTTAAAGCAAGTTTACACTGCTTATGTTCAGAGAGAAATTAACAAGCCTGAAATGCCAATACTCTGGCCTTACTACGCTTTATGCAAAAAAGTTTTCGGTTATCGAGCAATCAAATCTAAACTCAAGAACGGAAAATTAGACTCAGATGATAGCGAAGACTGGTCAGCGAAAGAAATCAAACAACTAATAAACTATTTCTCTCACAACTTCGATGATATCAACAGTAATATAGAAGACACAACAAAATGGTCTGATTTAGCCGGAGAAATAGGAAAAGGCGAGAATTCTTGCAAAGAAAAGTTAATCGAACTCCGAAAGTCTTATAGGAAATTGAAAACTATGAGGAGTAGGAACCCAGAAGTTAAGATTTCTTGGAAATATTTCAATATGTTTGAAGAAATTTATAATGCAAAGGAAAATGGTGTGGAGACGATGGAAGTGGACGACAGTGAGACTACTTATGTAGAAATACCTGCGGGTTCTGATGACAGGGGTGAGCAGGAAGAAGACGATTACCAATGCATCATAGTGATCCCAGAAGGGCAAGATATTTCTCAGATAGAGAACGCTCGAATTATAATACAGGAAAACCCAACGTCTCAAGAGCAAGAAGAAACAGTCCTCACAGAACCTCCCAAGGAGGTTCGACCACTTGTTAAATGGACAAAGCGAACTAAGAAGAGGTTGCTTATATTCTACATAAATTACATCCGATCACATAAAGGGAAGGAAATTAACCCCAAAGATATGTGGGCAGAAATAGCCGCAAAATTACCCAACAAAACACCACTGGCTTGTCGGAAAATGTTCGCTAAATTGAAGGCAAATCATAAACAAATTGACGAATTAGATCCCAATATGAAGAAGACACCTTATTTCGCATTACTGGAGAAAGTTATGCGACTCAAACCGAAATTCactaaaacagaacaaaataaagcaTTAAAAGACGGAAAAGTCTATAAAGATGTGTCTTTACCTGATGAAAAAGTAGCACAAGCTTTGCAGTACTATTTAGAAAACATAGAAGATTTCGTCAGTCCTAGATTTGAAAAGAAATACCTCTGGACTGAACTAGCGAATTACGTCTCTGAACCTGTTACGAAGGTgtttaataaaatcaattatttaaaacaagcgTATAACATGGATACGGATGAAGTAGCCGGCGAAAAGACGCCATTTGCAGAGTATTTAAAAGAAATCTTTGCTAAAGAGATCGCCATCAAACTCTTCTTAGAGAACCAACCAAAACCGGTGATAGAAGAACCAGGAGTTGAGGAAACCTGGTCTGATGAAGAGACGGAACAGTTACTAGAATGGTATTTAAGCAATTTAGATAAGTTCAAAAACCCTAAATTCGTTAGAAGTTATCTCTGGATGGAAGTTTCAAGCATGTTAAATAAAAGTGCTATTACTTGTTCAAAGAAAATGTCTGAAATTCGGACGCAGTATAGGAATATGGTGAGAGAAAGACCAGAAGAATTGAATGAGTGGAGGTTCCTAGATTTGTGTCAGAAAATCTATGGGACTGGAAAGAAAGGTACCCCCCATGAATAG
Protein Sequence
MDGSIVVKTEMGTNGEILLFYVDENGGNEEGVLTTVESIENQSIQLQQDNSYIIQEVGDDSHEISTDQSAEIDDWTEDETKRLLVFYNDNKQTFISGTTKKKHLWTVACKTMLVGKNPNACEAKLNSLQSKYNTICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTPEPQIIKVPAVKQNYDNVMVVKKVNSRSTADEKVEMMLNLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYLTEEYRLIENQAIAEIEEPAPKVIDWDTTEMTVLVKYCFDCFDEFEDKTIPNNFLWTEIGRLLDKTADACKSKYEELKDEHLDKYIQGGYDLRTRKPIEILFDNLISKRIESQILKSGKIPEQLERWKTEELDELVQFFYDNIEMYKDLVCHFVCWAGVSKKLKRTLLSCRSQWEDLLMLYRTILNDKKENPYMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFGQSQKSDAGKIGVKKVNIKLDETLEEFTDDDESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFSHNFDDINSNIEDTTKWSDLAGEIGKGENSCKEKLIELRKSYRKLKTMRSRNPEVKISWKYFNMFEEIYNAKENGVETMEVDDSETTYVEIPAGSDDRGEQEEDDYQCIIVIPEGQDISQIENARIIIQENPTSQEQEETVLTEPPKEVRPLVKWTKRTKKRLLIFYINYIRSHKGKEINPKDMWAEIAAKLPNKTPLACRKMFAKLKANHKQIDELDPNMKKTPYFALLEKVMRLKPKFTKTEQNKALKDGKVYKDVSLPDEKVAQALQYYLENIEDFVSPRFEKKYLWTELANYVSEPVTKVFNKINYLKQAYNMDTDEVAGEKTPFAEYLKEIFAKEIAIKLFLENQPKPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSSMLNKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_00851758;
80% Identity
-