Mlor000550.1
Basic Information
- Insect
- Mythimna loreyi
- Gene Symbol
- -
- Assembly
- GCA_029852875.1
- Location
- CM056777.1:12227811-12228203[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-10 2.7e-07 31.0 0.0 1 38 15 53 15 58 0.93 2 2 8.3 4.4e+03 -1.7 0.0 24 34 94 104 93 109 0.71
Sequence Information
- Coding Sequence
- ATGGTTCGAGATTATAAGAGACGTACTAATAGAGGAGGGTGGAGTGAAGAACAAATGAAATTAGCCATTCAAGCAGTTTTAGATGGAAAAAATGGTTATAAATCAGCCAGCAAGACTTATAATGTCCCTCAAACAACACTCGAGCGTAAAGTTAACCAAGCCAGAAAAAGAGAGAATAATATACTAAATGTCAAAGTTCCGTTGGGTCCGATTACAACAGTTTTttcagaagaagaagaagaacaaatCCTTGTAACTTATTTAAAGGAAATGGAAGGAAGATTGTTTGGGTTGTCAACATCCGAATTACAGAAGTTAGCCTATGAGTTAGCAGTCCGTAACAACAAACAGCATAAATTTAATGAACTCGGCACCAaatgtgactgtttctag
- Protein Sequence
- MVRDYKRRTNRGGWSEEQMKLAIQAVLDGKNGYKSASKTYNVPQTTLERKVNQARKRENNILNVKVPLGPITTVFSEEEEEQILVTYLKEMEGRLFGLSTSELQKLAYELAVRNNKQHKFNELGTKCDCF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -