Mlor021673.1
Basic Information
- Insect
- Mythimna loreyi
- Gene Symbol
- -
- Assembly
- GCA_029852875.1
- Location
- CM056799.1:6965032-6967365[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-14 4.6e-11 43.1 0.1 1 45 16 60 16 60 0.95
Sequence Information
- Coding Sequence
- ATGGCTCCATCTAATCCCACACGTAAGAAAAGAGGGGAGTCATGGTCTGAAGAAACAATGAAAGCTGCCATTAATGCCGTGCAAAGAGGACATTTGACTCAGCGATCAGCAGCAGAAAGATATAATATTCCGCGAAGAACTTTGAGAGATCACTTAAAAACTGGTGAAGAAATTAAACGTTTGGGGAGAAAGTCTATTTTGACGATGAATCAAGAAAGAGATTTAGCTTCTCGGATAAAAAGATTTGCAAGCATTGGGATTCCACTAACTCCTAAATTCATTAGAAAACAAGCTTTCTTATTTTGCGAGAGGCATGAcatcaaaaataatttcaatagtTCCAAAAGAATTGCTGGTGTAGACTGGTTGAgacaatttttaaaaagaaatccaTCCATTAGTAAACGTAAGCCGCAAATGATGAATCCAGCGCGtgcacaaaaattaaataaacctaTTGTTGAACAACATTTTCAAAGTATCCGTAAATTGTATGACGAGTTAGATATACTGCGACACCCAGAAAGGTTATATAACATGGACGAGAAAGGATGTCGAATAACTGTGCATAAACAGCATACAGTTTTGGCAGCAAAAGGGAGCAAAAGAGTTCACCTCATTGCTCCGGAGCATGCAGAGAACGTGACGATAGCGATGTGTGTGAATGCTATAGGTACGGCGATTCCAGCTATGATAATTTTTAAAGGGCAAAGAAACAGACCAGATCTAACAGAAAATCTACCAGCTGGAACATTAGTTAGAATGGCACAGAAGGGAAGTATGACTTCAGATTTATTTGTGGAATTTATTCAGCACCTGGCAAAACATAAAGTCGctgataaatgtttattaatttttgatggAGCAAAGTGCCATCTATCAGTCGAGGCGCTAGATGAAGCTGATAAAAATGGTATAGTTCTCTACTGCCTCCCGTCAAATACAACTCACGAATTGCAACCGTTGGACAAATCGGTAAATAAATCCTTTGAACATCACTGGGATGAAGCTGTCTTGAATTTTTTGTCAGTCAACGTTAATAGGACATTGAACAAAgccgattttaataaaatattttctcaagTGTGGCCCAAATGCATGACACATACTAATATAGTGAATGGGTTCAAAGCTACAGGTCTTTACCCCTATAATCCTGAAGCAATCCCTGAAGAAGCATTTGCTCCATCAGTTTTATCTGAAATTCCATGtcctcaaaatcaaaataaacaagTGGAGAAACCTGATGCTAATACTGATACTGACTCTGATGAAAATCAGCCTAATTTCCATGTAAACCCATCGAACATACGGGTCTCGACTCCTGATGATTTTGATGTTGATTCTGGCAACGACCTAAATGTGATGCCTAGAAGAGAGATTTCTTCTGAACAGTATCAAAATATGCAGAATTATCTACCGTCTACTTCAGAATTAAGGGAAACAAACATTCCACGTATTGTTGATTATAGCTCATCTACTGATTTTTCTGAAACTGAATTGGAACAAGCTCCTCATAATTCTACACTGCATGATTCAGACCATAGCTTATGTGCATCACCATCCATAATTTCTGAAAATGTATGTGTGGTTCCTGAAACGCCTACAAATAAAGAAAGCTATAATGACATTGATATGGCAGTTCCGAGTTGTTCAGGTCTGCAAAGACCTATACGCCGAAATTACAGCTCTGATTCATCTGACATAGATGATTTCATAAACAAGCTATCACATAATAGCTTTAAATATTCAGTTGAAGACGTCTATGGTTATTCATCAACAGAtgaagaaaatgaaaatttaggtattataaataaaggAGAGACAACGcctaaaaagcaaataaaagaaGCAAAACCTAATGATGATGAGTACTGTTTTTCAGATGAAGATGATGTACCGTTGTTAAATTTGAAGAAACCAAATAACAAAAcagaatttgaaaaatttttacCTACTCCTAATTACGCTGTAACTAAAACAAACCGTCCACGAAAGAAAGCTATCAATTATAAAGGTCAACGTATTACTAAAGACCTCTTTAACAAAAAAGATGAacgtaaaaagaaaacaaagaaaaccaaaaccaaaaaaaatgagAAGAACAAGAAGgataagattaaaaatagagtaataaaaacaaaaaagaagacacaaaataaaaagagaattaATGAAAAAGAAGACGATACAGAAGAATGGTATTGCTATGCATGCCATGAAAATACGAAATTGGACATGAGACAATGTAAATTGTGCATGAAGTGGTACCATGAGGAGTGTGTGGGCCTCTCGAAAGATGATGAAGACTTCATTTGTTCAAGTtgtgaataa
- Protein Sequence
- MAPSNPTRKKRGESWSEETMKAAINAVQRGHLTQRSAAERYNIPRRTLRDHLKTGEEIKRLGRKSILTMNQERDLASRIKRFASIGIPLTPKFIRKQAFLFCERHDIKNNFNSSKRIAGVDWLRQFLKRNPSISKRKPQMMNPARAQKLNKPIVEQHFQSIRKLYDELDILRHPERLYNMDEKGCRITVHKQHTVLAAKGSKRVHLIAPEHAENVTIAMCVNAIGTAIPAMIIFKGQRNRPDLTENLPAGTLVRMAQKGSMTSDLFVEFIQHLAKHKVADKCLLIFDGAKCHLSVEALDEADKNGIVLYCLPSNTTHELQPLDKSVNKSFEHHWDEAVLNFLSVNVNRTLNKADFNKIFSQVWPKCMTHTNIVNGFKATGLYPYNPEAIPEEAFAPSVLSEIPCPQNQNKQVEKPDANTDTDSDENQPNFHVNPSNIRVSTPDDFDVDSGNDLNVMPRREISSEQYQNMQNYLPSTSELRETNIPRIVDYSSSTDFSETELEQAPHNSTLHDSDHSLCASPSIISENVCVVPETPTNKESYNDIDMAVPSCSGLQRPIRRNYSSDSSDIDDFINKLSHNSFKYSVEDVYGYSSTDEENENLGIINKGETTPKKQIKEAKPNDDEYCFSDEDDVPLLNLKKPNNKTEFEKFLPTPNYAVTKTNRPRKKAINYKGQRITKDLFNKKDERKKKTKKTKTKKNEKNKKDKIKNRVIKTKKKTQNKKRINEKEDDTEEWYCYACHENTKLDMRQCKLCMKWYHEECVGLSKDDEDFICSSCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01363024;
- 90% Identity
- iTF_01363024;
- 80% Identity
- -