Basic Information

Insect: Mythimna lalbum
Gene Symbol: Sall1
Assembly: GCA_949319445.1
Location: OX439356.1:20097903-20109744[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.11 10 7.8 0.8 1 23 1004 1027 1004 1027 0.91

2 13 5.9 5.8e+02 2.3 0.6 1 23 1106 1128 1106 1128 0.90

3 13 3.3e-05 0.0032 18.8 2.5 2 23 1131 1152 1130 1152 0.97

4 13 0.00016 0.016 16.6 3.3 1 23 1158 1180 1158 1180 0.98

5 13 0.0079 0.78 11.3 2.6 2 23 1187 1208 1186 1209 0.94

6 13 0.058 5.6 8.6 1.2 5 23 1222 1240 1221 1240 0.96

7 13 0.021 2 10.0 1.1 3 23 1247 1268 1246 1268 0.96

8 13 0.0059 0.58 11.7 0.3 2 23 1285 1305 1284 1305 0.98

9 13 0.0021 0.2 13.2 0.9 3 20 1313 1330 1311 1333 0.85

10 13 0.0035 0.34 12.4 0.7 1 23 1341 1363 1341 1363 0.98

11 13 0.0061 0.6 11.7 7.2 1 23 1369 1391 1369 1391 0.98

12 13 7.6e-06 0.00074 20.8 1.4 1 23 1397 1421 1397 1421 0.98

13 13 0.0012 0.12 13.9 4.2 1 23 1427 1449 1427 1450 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.11	10	7.8	0.8	1	23	1004	1027	1004	1027	0.91
2	13	5.9	5.8e+02	2.3	0.6	1	23	1106	1128	1106	1128	0.90
3	13	3.3e-05	0.0032	18.8	2.5	2	23	1131	1152	1130	1152	0.97
4	13	0.00016	0.016	16.6	3.3	1	23	1158	1180	1158	1180	0.98
5	13	0.0079	0.78	11.3	2.6	2	23	1187	1208	1186	1209	0.94
6	13	0.058	5.6	8.6	1.2	5	23	1222	1240	1221	1240	0.96
7	13	0.021	2	10.0	1.1	3	23	1247	1268	1246	1268	0.96
8	13	0.0059	0.58	11.7	0.3	2	23	1285	1305	1284	1305	0.98
9	13	0.0021	0.2	13.2	0.9	3	20	1313	1330	1311	1333	0.85
10	13	0.0035	0.34	12.4	0.7	1	23	1341	1363	1341	1363	0.98
11	13	0.0061	0.6	11.7	7.2	1	23	1369	1391	1369	1391	0.98
12	13	7.6e-06	0.00074	20.8	1.4	1	23	1397	1421	1397	1421	0.98
13	13	0.0012	0.12	13.9	4.2	1	23	1427	1449	1427	1450	0.95

Sequence Information

Coding Sequence: ATGGACCAACTCGCGGTGCAGTGCCCCGTGTGCACACTGTTTCTGCACAATGGGATTACCATGGAATCCCACTTGGACACCCATCCCAAAGACCAGGTTATAAAAGCTTTGTGTAATATAGCAAACAAGGGCTCTAATTATGCCAGCAGAACTTCCACGCCGGTACATTCTGAGAGGTCATACAGGAGCAGGTCACGGACACCTGCCACTGATGACAGCACCAAGTGGACTGGATCACGTAGTAATGATCATGAGCGCTACTGGCGTAGAACACCTAGCAGGACCTCTAAAACACCGGTATCAAATACATCTAGAAATGGTACACCTGATATTAGAATGCTTGATGTGAACTTTGACAACCATAGCATTGCTGGAAGTGGTTCAGGACAACATGTAAACAATCCATTTCATTTAAAAGCTGATAAGCTTCAACATACTTTCCAGTGTCCTCCAGTTCCAGAGTTTGATCCACAGTTTGTTTACTATCCAGAACAACAAGAGGACAGGGAGATCAAGTACTCCCGGAGTGCTGAGTACAATGCCATGGACAACAGCAGTAATATGTTTTCATATAATGTGCCACCATTGGCAGGGCCAGGGGTGAAATTGTTACCAGGGGTGTCTAGAAAAGCTAATGACCTTGTTAAAGTTCTGCCAAAACCAAATAACATTCTCCTTAAGACCAATATGGGTGGTGTGCAATACATAGGTCCAGGGGTTAAGCCCATGCATGTCATGATACCATCTACTCCTACATTCATGCAGAAGAACATGCAAAACAACATGATCATGACGGACAGTGTACCAAACACACAGATTCCTATCGATACCAAAACGGCTTCCCCTCCTTTAGCTAGCAGCCAACTGAACCAAATGACTTCTGGTGCGTTCACTCCAGGAACAACTGTTGTTACCCAAAACTCCCAAATAATTTACAGAGAAATGGTGCACAACATAGATGGTAAGCCCTTTATAACTACCATGCCCACAGTTCTCGGTGGTCATGACAATGTCTCCAATTTAGCTCAAGCTAGCTCCATGTATCAAAACGTTATGGTTGTAGATCAGTTTGGAAATACTTCATGTATGTATACAACTCCTCAACAAATGATGAATAAATCCTGCCCAACTTCCATGTACAATGAGTCTGGCACTCTAATGCCAAGTGTAGAAGTtgataaatctgtagaaaacATGAGTGATCCAAAAACACTTATTATTGAGGTAGGTCCACTCATTCCTCCTATTCTTGATAATATTGAAGATCCAAGCTCCAGCATGCCACAGCCAGTTACCAGCAGTGCAGTCGACAATACTGAGATACCCACTGAGACAGTGGACCCAAAATATGAAATGCCAGGCAGTACCAAGGGCTTAAAAATACTGAGCAACATTAAGGTTGAAGTTCCTGTGCAGCATCACAAGAATATGGTCAACACTGTCATGGATCTGACTGGGCCTAATGAGACGGACTATCCTGTAGAGCGAGTAGATTCACCTGACAAGATCCTGCCTGACCTAGAAGATAACCAACTGTCATCTGATGACACTCAGCCATCATCAATGTCCAGTGCTGATAGCATGGTCTCCCATACATTTTCTGTGATAAAGAATGTTGGTAATCCAAGCAAAAGTTCTGACAGTAAGTTGGACACTGACTTTTCAGACAGCTGTCCTGTGCCAGATTTAATATGTAATGAGAAGCCTTCCATATCACCTTGTAGTGAGTTGTCAGAAAATGGCGACAATTCAACCGATGTTACCTCAATGTCTCCCAAACCTGAAAGTAATCAAGTTAGCCATAGTAACCTAGGACTTCCAGAAAAGAAAATTCAGCTTTCACAGAAGCCATACAGGCACAACACACTAAGACTGaacaatatttttgtgaagaaGCACAAGAAAGTTTTGAAGATTAAAAATGCCAAGGTCTTCCCTGCGAGCACGGCAAAGAAAACTGAACAGAGGGACACGATCCCGACGTCGTCGACTTGCAGATCGCCAGAACATTTTACCATGAATAAAATGCACCAATCAGATAAGACAGATGCTAAAGAGAAGACTAATCTCTTGCAAACTATATCTGTAGAGGAGATCAAAGAAAATGatgaaaataatgattttgatGCTAACACATCAGATCAATCTTTGGACATAGAGCCACTAGCAGCTGATGATTTGAACCAGCCTGAGTTTGCTTCCAACATTGATCTGATACAGGTGAAGGAGGAAATAAACACGAGCAATGAAGGAGGGTTCAGCAATGAACCGGTGATGACGGACCGCATGCTGACTCCACTAGAAACATTGCGACCCATCAATGTTATTAGCTACGGCAATCTGTCCAATGACGATTTTAACGAGGAGTCCGACGACAGGGAGCTGCTGGACCTAGAAGCGGCCTCCAAGAACAAACAGTTTGTCAACATGATGAACGAGAATTATTTCGGCGACAATATTTACGCAGACTACTTTACTGCTGATCGGGTGGAGGGGTTCGACGCCGAGCGCGAGGCGGCGGTGTTCAAGGATGGCGCTAAGGATGGTATGTACCTCTGGGGCGAGCCTTCACAGAAGGACGGCGATTTCGTCTTGCCTAACTTTATTCAAGAGAGTTACAAAATAGCCGAGAGTAACGGGATAGATTATTCTGAGCTAGGTGCTAGAGAAGGGCAGGTGGACGTGGAGGTGGACGGGTGCGAGCGAGACAGCAAGGCCGACGTGCTGAGCGAGGGCCCCAGCGAGAGCGACGCGCCCATGGACATCTGCGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGGGACATGGAGTCGCCGTGGAGCGGGATTTACTCAGAGGTGACGCCAGCTGAGCCCTACGACCTGATCGCCCGCGAGAGCTGGGTGTCGGACGGCTCGGAGGTGGACGCCAACGAGAAGCAGGAGCCTATCGAGGAGGAGCTGCCGCTGGCGCCGCCCCTGACGCCAGTGTTCGGGCGCGCGCGCGTGCACACGTGCGCGGCGTGCGGCGCCACGTGCACGTCGCTCAAGGAGCTGCGCGCGCACAAGGCGCTCGTGCACGCGTTGCCCACGTGCTCCGCCAGCAAGACCACCTACAGCAGGCTTGTGACCGCGCGAGCCATCAAGAAGGAGGAGAAACCTGATACTAACAACCTACTACCACCAATAGACTCAAAAGACTCGATATCGTCGACGATCCTCCAAGTTTACGAGAGTATTCAAGTTGAGGAGGCCAAGCCGAAGATCGAGGTAGACCGGCTGATCAAGCAGGAGGTGAAGCGCAGAAGGAAGGACTACGTGTGTCCCACGTGCAAGGTGGACCAGGGCACGGACGCGCAGTTCCACGCTCACCTCAAGACCCACCCGCTGGAGTGCCTCACCTGTGGCAAATGCTTCTTCAGGAGAGCCAACCTGTCCCTGCATATAAAGACACATTTAGGAATTAAGAATTTTAAATGCGAGGTATGTGAGAAACGTTTCGTGACACGTCAGAAGCTGAAAGAGCACCACAACGTACACACGGGCCGCACACCCATCAAGTGCACCGTGTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGGACCGGCACCACCTGGCCAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCGTGGTGTTCCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCGGAGCGGCCGCGCGCGTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTTCCTGGCCGAGCGGCACAAGGGCAAGCAGGAGAACGTGCAGTGTCCCGTCTGCAAGCAGGTGTACCTGCGCGCGAACCTGCGCACGCACCTGCAGACGCACAGCGGCCAGCGGCCCTACCTGTGCATCATCTGCAACAAGTCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGCGTCGCGCTCGGCCAAGCCCTACAAGTGCGGCCTGTGCAAGGGCGCCTTCATCCGCCACTCGGAGTACGTGTCGCACATGAACGCGCACAAGTCCGTGCGGCCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGATGGCCAAGAAGTACGTGTGCAAGGTGGCCGAGTGCGGCAAGTCCTTCCACCGCTCCTACTACCTGTCGGAGCACATGAAGGTGCACAGCGGCGCGCGGCCCTTCGCCTGCAACATCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTGAAGATCCACCACGCGAGGGAGCCCGTCGCCACCGAGGCGTAG
Protein Sequence: MDQLAVQCPVCTLFLHNGITMESHLDTHPKDQVIKALCNIANKGSNYASRTSTPVHSERSYRSRSRTPATDDSTKWTGSRSNDHERYWRRTPSRTSKTPVSNTSRNGTPDIRMLDVNFDNHSIAGSGSGQHVNNPFHLKADKLQHTFQCPPVPEFDPQFVYYPEQQEDREIKYSRSAEYNAMDNSSNMFSYNVPPLAGPGVKLLPGVSRKANDLVKVLPKPNNILLKTNMGGVQYIGPGVKPMHVMIPSTPTFMQKNMQNNMIMTDSVPNTQIPIDTKTASPPLASSQLNQMTSGAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTVLGGHDNVSNLAQASSMYQNVMVVDQFGNTSCMYTTPQQMMNKSCPTSMYNESGTLMPSVEVDKSVENMSDPKTLIIEVGPLIPPILDNIEDPSSSMPQPVTSSAVDNTEIPTETVDPKYEMPGSTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNETDYPVERVDSPDKILPDLEDNQLSSDDTQPSSMSSADSMVSHTFSVIKNVGNPSKSSDSKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDVTSMSPKPESNQVSHSNLGLPEKKIQLSQKPYRHNTLRLNNIFVKKHKKVLKIKNAKVFPASTAKKTEQRDTIPTSSTCRSPEHFTMNKMHQSDKTDAKEKTNLLQTISVEEIKENDENNDFDANTSDQSLDIEPLAADDLNQPEFASNIDLIQVKEEINTSNEGGFSNEPVMTDRMLTPLETLRPINVISYGNLSNDDFNEESDDRELLDLEAASKNKQFVNMMNENYFGDNIYADYFTADRVEGFDAEREAAVFKDGAKDGMYLWGEPSQKDGDFVLPNFIQESYKIAESNGIDYSELGAREGQVDVEVDGCERDSKADVLSEGPSESDAPMDICADERMPPRGELSGQESNGDMESPWSGIYSEVTPAEPYDLIARESWVSDGSEVDANEKQEPIEEELPLAPPLTPVFGRARVHTCAACGATCTSLKELRAHKALVHALPTCSASKTTYSRLVTARAIKKEEKPDTNNLLPPIDSKDSISSTILQVYESIQVEEAKPKIEVDRLIKQEVKRRRKDYVCPTCKVDQGTDAQFHAHLKTHPLECLTCGKCFFRRANLSLHIKTHLGIKNFKCEVCEKRFVTRQKLKEHHNVHTGRTPIKCTVCDDTFRRYSNMVQHRDRHHLAKRAKVRDFVCQCGVVFHSRAKLRWHQETHAERPRACLYCSDKFVHAASLTRHVRRSHNEYFLAERHKGKQENVQCPVCKQVYLRANLRTHLQTHSGQRPYLCIICNKSFTTKWNLKLHRWTHASRSAKPYKCGLCKGAFIRHSEYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01026666;
80% Identity: -