Basic Information

Insect: Mythimna lalbum
Gene Symbol: -
Assembly: GCA_949319445.1
Location: OX439374.1:6098229-6165385[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.15 15 7.3 1.4 1 23 464 486 464 486 0.97

2 16 0.0023 0.22 13.0 1.1 1 23 493 515 493 515 0.95

3 16 0.11 11 7.8 3.6 1 23 546 569 546 569 0.98

4 16 0.0033 0.33 12.5 0.1 1 23 573 596 573 596 0.96

5 16 0.0044 0.43 12.1 0.3 3 22 610 629 609 633 0.94

6 16 0.16 16 7.2 0.2 2 23 675 697 674 697 0.96

7 16 8.7 8.5e+02 1.8 7.6 2 23 712 733 711 733 0.95

8 16 1.1e-05 0.001 20.3 0.7 1 23 739 761 739 761 0.96

9 16 0.00094 0.092 14.2 4.9 1 23 768 790 768 790 0.97

10 16 0.001 0.1 14.1 0.1 1 23 796 819 796 819 0.94

11 16 0.016 1.6 10.4 0.1 2 23 1365 1386 1364 1386 0.96

12 16 0.02 1.9 10.1 0.2 2 21 1395 1414 1395 1419 0.92

13 16 0.0068 0.66 11.5 2.9 2 22 1500 1520 1499 1521 0.90

14 16 8.6e-06 0.00085 20.6 0.8 1 23 1527 1549 1527 1549 0.97

15 16 6.5e-07 6.3e-05 24.2 0.7 1 23 1556 1578 1556 1578 0.98

16 16 0.00032 0.031 15.7 0.5 1 23 1584 1607 1584 1607 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.15	15	7.3	1.4	1	23	464	486	464	486	0.97
2	16	0.0023	0.22	13.0	1.1	1	23	493	515	493	515	0.95
3	16	0.11	11	7.8	3.6	1	23	546	569	546	569	0.98
4	16	0.0033	0.33	12.5	0.1	1	23	573	596	573	596	0.96
5	16	0.0044	0.43	12.1	0.3	3	22	610	629	609	633	0.94
6	16	0.16	16	7.2	0.2	2	23	675	697	674	697	0.96
7	16	8.7	8.5e+02	1.8	7.6	2	23	712	733	711	733	0.95
8	16	1.1e-05	0.001	20.3	0.7	1	23	739	761	739	761	0.96
9	16	0.00094	0.092	14.2	4.9	1	23	768	790	768	790	0.97
10	16	0.001	0.1	14.1	0.1	1	23	796	819	796	819	0.94
11	16	0.016	1.6	10.4	0.1	2	23	1365	1386	1364	1386	0.96
12	16	0.02	1.9	10.1	0.2	2	21	1395	1414	1395	1419	0.92
13	16	0.0068	0.66	11.5	2.9	2	22	1500	1520	1499	1521	0.90
14	16	8.6e-06	0.00085	20.6	0.8	1	23	1527	1549	1527	1549	0.97
15	16	6.5e-07	6.3e-05	24.2	0.7	1	23	1556	1578	1556	1578	0.98
16	16	0.00032	0.031	15.7	0.5	1	23	1584	1607	1584	1607	0.94

Sequence Information

Coding Sequence: ATGTCTGCATGTTCAATCATTCAGTGTGGTGCAAGGAAAAACCCCGATCAACCTCTTCTAACCCTGCATAGGTTCCCTAAAAATGAAGTGCTACGTCAGAAGTGGCTTGAAGTCATTGGGGTGGAAAATGTCAAAACTGGAGTTAAAATACCACGAGTCTGCTCAACACACTTTGCAGAATCATCCTTCAACAGAACCCTTGATGTAACGAGGCTGCGTGATGATGCAGTACCGTCAATCCACCTTGTAATGGAGGATGATAACCTGGTCGAAATTAAGGTCTGCCGCGTGTGTTTAGCTATGGATGTCAAAATGTTTGATATGAAGGACACCAAATTGACGGACATGTTCCGGAACGTCACGGGGATATCGGTACGCGACAAAAAAGGGACAACACCCCAACGTGTTTGCTGGGAGTGTGCAGCGCGGCTCACAGCGGCTGCAACGTTCAAGAACAAAGCACTCCTCAGCGATGGATTgcttaaaaatataacacacaTGAACAAAAACGACATCGCAAAATTGAAACATATCTATCGTGATTCTCTCGATTCACCTCTCACGTTTGAACCAGCATTCACTGATGATATCAGTCCTGATGACATAGAAACTGATGATGAAACAGATTGTGAAGATGAGCCACCGATAGTAAAACCTTTGAAAACTAAAAGATCTGATCCTGTAGTAGAAAACAATTCCAACATTCAAACCAAACATATGAACAGTGAAATATTTTCAGCACTCACAATAGAAAACAGTGTAAgttgtaataataatgataaggtTTTAAGTGAAGATGCTGTAATGACTCATGCACCAATAAATGAAGATTGCTATATAGTTATAGTAACTGGCGATGAAGAAAATATACCAAAGATAGATGTAGTCGGTAATACTGAGAATGAGACGTTAAGTGAAGAAGATACAGAGAGTCTAGAAGTATCTGCCAATAAAGCTAAGAAAGTGACGATCAGGAAGGTTGGAGCTTCGAGTGAACAAGGAAACAGGCTTAACAACGGGGAGAGACAGAAAATTATTGCGATAAACGAAAATGGTCTCTCGCTAGCAAACGGAGTTAACGCACCCGGATTTGACGACGACGGAATTGCTGATACGGATGTTATAGAAGATCCGTCAGATGAAGAATACGTGTTGTCTGATAAAGAAAATTGCTCCTCCGACGATAGTCTTCCTTCAGAAAAATGTAAAGAGAAAACAGTTGCTAGAACTGTGAAAAAGAGAGAAGATCCGACGGACCCGAAGATTAGTCGTCGATATAAACCGCTAACAATTGAAGGTTTGAATTTTACGTATACGGAATTGACGTTAGAGGAACAGTTGGCTGAAATCGTCAAAAGGCAGGAGGGTTTGAATTATAAGAATGGTGTTTTTCATTGCACCGTATGTTATAAAGGCTTTTTGGATTTAGGAGCTTACAATAGCCATATGTTGAAGCATACTAACcgaTTTGGTGAACATGAATGCCCGGTCTGTAAGAAGCGTTATAGTACGAAGTTAGCGCTTGGAAAGCACAGGCTAGCCCACAAACAGAAGTACAGCTGTAACGCGTGCACCTTCGTGACCAGGTCCCGGGGCATAGCGGCGCGGCACGAGCAGTGGCACAAGGGACACAAGTATACATGTCCGCATTGTCAGGCCGAGTTCCAtcaatTCACAACTTACATGGGTCACATCCGCATCAAGCATCCGTCAGACTTCGTTTGTGGGCTTTGCGGCTACTCTTTCGTCAGCGCCAAGGGCATCGAGGTACACCAGAAACTCAAACATAAACTCGATAATGTACAGATACCGGAAGACGGTCCATTGTGCGAGCTGTGTAACGTGAAGTTCGTCTCATCAGAGGCGCTCCAACGACATCGCCGTGTTTCCGCTAAGCATAACCCAGACAAAAAGTCAAGGGAGCCTAACAAACCAAAGCAAGACCTAACGAGACGGGTGCTAGAGAATGGCAGATGGAGACGTATACATCCCGCTCATACAGTCTCGAAAGCGGAGCCGATGCCTTGCGAACAGTGTGGCGTTGAGCTAAAAGACTCGAGGGCGTACTTCGCTCACTTCAGACGGATGCACCCCGACAAGAACCGCACTAAGTACGCCATGAAAACCCCCTGCATGTGTGAAGTGTGCGGGAAAATGATACAAAGCTACCACCATTTCAAAGACCATGTGTGCCTGCACGTGCGCGAGCTGCGCTTCACGTGCGAGACGTGCGGCAAGGCGTTCAGGACGAAGACCTCGCTGGTGAATCACCAGGTCTTGCACAGCCAAGTACGGCCCACCTTCGAGTGTTCCGTCTGCGGGAAGAAGTTCTCCAGTTGCAACAACCGACATAGGCACATGGTTATCCACACCGGCCTAAAAGCCTACAAATGCGAGATTTGCGGCAAAGCTTTCAGGCTCGCAGCTCTGAAGCAAGCCCACGTAAATTACGTGCATCTCAAGAAACCGTGGCCGAAGAGAACGAGAAGAAAGCGAAAATCGGAGACGGGAcagTGTGGTGCCAGAAAAAACGCCAAGCGACCTAATTTGACCTCTCATAGgTTTCCTAAAAATGAGGAGGCATTCCAGAGGTGGCTTGATGTTATCGGGATAGAAAATATCAATCCTAAACATAAAGACCCACATGTCTGTTCACTGCATTTTACAGAAGCATCATACAATAGAACCTATGAAAAAGCTACGCTGCGTGTTGAGGCTGTACCATCACTCCACCATGTaCATACTGCATCAGCTACTAGCATCTCCGAGACGCCAGGTTCACCCGCTAAGACCTCCGCGGCGCCACGTTCAGCCGCTAAGACCTCCGCGGCGCCACGTTCAGCTGCTAAGACCTCCGCGGCGCCACGTTTAACCGTTAAGAACTTCGCGGCGCTAGGTGCTAAACCTAGCTCCGCTGCTTCGCCAGATTTGTCGCATACTGCATCAGCTACTAGCATCTCCGAGGCGCCAGGTTTAGCCGCTAAGACCTCCACGGCGCCACGTTTAGCCGCTAAGACCTCCGCGGCGCCACGTTTAGCCGCTAAGACCTCCGCGGAGCCACGTTTAGCTGCTAAGACCTCCGCGGCGCCACGTTTAACCGTTAAGTCCTTCGCGGCGCTAGGTGCTAAACCTAGCTCCTCTGCTTCGCCGGATTTGTCGTTATGCCGAGTGTGTCTAGCTATGGATGTCAAAATGTTTGATATGAAGGACTTCAAATTGATGGAGATGTTCCAGAACGTCACAGGGTTATCGGTAAGTGATGAACAGAAGAGCATACTCCAACGTGTTTGTTGGGAGTGTGCAGCGCGGCTCGCAGCGGCGGCAACGTTCAAGAATAAAGCGCTGCTCAGCGATGCATTGCTTAAAAATATAGCAGATATGAACAAAAGTCACATCGCAAAATTAAAACTCATGTATCTGATAGTAGCTGGTGATGAAGAAAATATACCAAAGCTAGATGTAGTCGTTAATACTGAGAATGAGACGTTAAGTGAAGAAGATACAGAGAGTCTAGAAGTATCTGCCAATAAAGCTGAGAAGGTAACGATTAGGAAGGTTGGAGCTTCGAGTGAACAAGGTAACAGGCTCGACGACAAACAGAGAATTATTACGTTAAAAGAAATAGATCTCTTGTTGGCAGAAATATCGAAGAAATCGGACTTATCTCTATCAACTTGCAATTTTGACATCGAAGACGACTGCGGAGTATTCCTCACAGAAGACAAAGATCAGAACAATGACGGACATAATGGCACCGGATTTAACGAGCCCGGATCTGACGATTACGGATTTGACGACTACGGAATTGCTGATACGGTTGTTTTAAACGACAAAGATGATCCGTCAGAAGAAGAATACGTGTTGtttgataataaaaattattcctCAGACGATATTCCTCCTTCAGAAAAATGTAAACAGAAAGCAGATGAGACCGCTAAATTagtgaaagaaataaaagatcCGACGGGTCCGAGGAAAAAAGGTCGGAGTAAAAAAGACGGATTGACCATTACGGATTTGACGTTTGAAGAACAGTTAGCTGAGATCGCCAAAATGCAGGAGAGTTCGAATCATAAGAAATCTTTTATTAAGTGTACCCTCTGTAATAAAGGATTTTCGGAAGAAGATGTTTACATTAGCCATATGTTGGAGCATATTGATATACCGGAAGACGGTCCGTCTTGTGAGCTATGTAACGTGAGGTTCGCGTCATCAGAGGCGTTTCAACGACATCTCAGTGTTTCAGCTAGGCATAACACAgataAAGACTCAAAAGAACCGAACCAACGCAAGACGGACCGCAAGAGAAGCGCGCGAGACAAGGATGGCGATATTGACGGAATGAGAGAGAGTAAGATGCAGAAGGTGGAGGGACAGATACCTTGCGAACAGTGTGGTGTCGAACTAGAAGGTTCCTGGGCATACTACATTCACTTCAGACGCGAGCACCCCGATAAGAACCGCACCAAATACCCCTCAATGAAGTATCCTTGCATGTGTGAAGTATGCGGGAGATTTTTCCAAAGTCAAACTCATCTTACCGAGCACATCTGGACCCACAAGGACGAGAATCCCTTCAGGTGTGATCCGTGCGGCAAGGTGTTCAGTTCGAAACGCAACCTGACCCTGCACCAGCGGGGACACAGCCAGGAGCGCCCCAGCTACGAGTGCGAGCTCTGCGGGAGGAGCTTCTCCAATTCCAGCAACCGTCAGAGGCATATGATGGCTCACGGCGTCGAGAAACCGTACAAGTGCGAAATGTGTGGCAAGGCCTTCAGGTTTCCTAGTGAGAAGCAGGACCACGTAAATTTCGTGCACCTGAAGAAACCGTGGCCGAGCCGAAGCAGAGAATTGCTGGGATATGACACAGTACagATAGAAGAAGACACAGACAATTATATGGAGTACAAAATTATGTACTTGCAAGAAAAACGATATTGTACGTTAAGATTAAAGAAAGGTATCGTTCCTCATAAATTCCAATGTCGAAATGATACTAAATTACAACCAAGAACGGGGAAAAAAGgagttttgaaaagaaaagcTTTAGTGGCAATAGAGGACATTCCAATGGCGCCCCCTGCTAAACTATGTGTGTGCCGAGGATGTCTAGCTTTGGATGTCAAAATGTTTGATATGAAGGACTTCGAATTGCGTGAGATGTTCCAGAATGTCACGGGGTTATCGGTAAGCGACAATACGGCGCTCACACACCATCGCGTGTGTTGGGAGTGCGCTGCTCGTCTCACAGCAGCTGCAACTTTCAGAGACAAAGCTCTGCTCAGCGATGCATTACTAAAAGATATAGCACACATGAAAAAAAGCGACATcgcaacattaaaacaaaattacagtaTGTTAAAATCGCGTCTCACTGTTTTTACTGCACTTACTCCCATCATTAAATATGAAGAAATAGATAAAGAAACAGTATCTAATGATGAGGCAGAatcaaatgaaattaaaactgaAGAAATGGAGTTTGAGGAACACGACCCTTGGATTAATATTCCTTTTAAAATAGAATCTAATCTTATAACGGAAAATGCATTTAAAACACAGACCCATCTTAATGACGATTCTATATTTAAAGACGATATTGAAAGTGACAAAGCTAACATCACAACGTTAGAAAATAATCACAGCCTAGTAACATCACATCTTATTAACTCTACAGCCTTTAAACAAACTATCAATGAAAACAAAGCTAAGGAAACAGCAGCGAATGACAATACAAcagttttaaaacaaacaacGATCAAACAAGAAAACCAGGACACAGATTTGGATCATAACGAACCATGGGAagatatttcttttaaattagaaATAGAATCTGATATTACAGCGGAAAATAACGCTAAAAGCTATACGAATAATGTTTCTACGTGTAAAGAAGATAGTGGACTTGATATAAGAACTATAGATCTACAAAATGACTTTGAAGAAGATGTCAAAATGAGTGACAATCTGGTTCTAAATGATGATAGTAATGTGATCGTAAATATCACTGGTGTAGATGATACAGTTAAGAAATCTAAGCTAAATATTGTTAGAATTACTGCGGATGAGATCTCAAGCGAAGAAGACACGCAGTGTTTAGCTGAATTGGTATCTGTTAGGAAGGCTAGAAGAAAAGACAAACTCTAA
Protein Sequence: MSACSIIQCGARKNPDQPLLTLHRFPKNEVLRQKWLEVIGVENVKTGVKIPRVCSTHFAESSFNRTLDVTRLRDDAVPSIHLVMEDDNLVEIKVCRVCLAMDVKMFDMKDTKLTDMFRNVTGISVRDKKGTTPQRVCWECAARLTAAATFKNKALLSDGLLKNITHMNKNDIAKLKHIYRDSLDSPLTFEPAFTDDISPDDIETDDETDCEDEPPIVKPLKTKRSDPVVENNSNIQTKHMNSEIFSALTIENSVSCNNNDKVLSEDAVMTHAPINEDCYIVIVTGDEENIPKIDVVGNTENETLSEEDTESLEVSANKAKKVTIRKVGASSEQGNRLNNGERQKIIAINENGLSLANGVNAPGFDDDGIADTDVIEDPSDEEYVLSDKENCSSDDSLPSEKCKEKTVARTVKKREDPTDPKISRRYKPLTIEGLNFTYTELTLEEQLAEIVKRQEGLNYKNGVFHCTVCYKGFLDLGAYNSHMLKHTNRFGEHECPVCKKRYSTKLALGKHRLAHKQKYSCNACTFVTRSRGIAARHEQWHKGHKYTCPHCQAEFHQFTTYMGHIRIKHPSDFVCGLCGYSFVSAKGIEVHQKLKHKLDNVQIPEDGPLCELCNVKFVSSEALQRHRRVSAKHNPDKKSREPNKPKQDLTRRVLENGRWRRIHPAHTVSKAEPMPCEQCGVELKDSRAYFAHFRRMHPDKNRTKYAMKTPCMCEVCGKMIQSYHHFKDHVCLHVRELRFTCETCGKAFRTKTSLVNHQVLHSQVRPTFECSVCGKKFSSCNNRHRHMVIHTGLKAYKCEICGKAFRLAALKQAHVNYVHLKKPWPKRTRRKRKSETGQCGARKNAKRPNLTSHRFPKNEEAFQRWLDVIGIENINPKHKDPHVCSLHFTEASYNRTYEKATLRVEAVPSLHHVHTASATSISETPGSPAKTSAAPRSAAKTSAAPRSAAKTSAAPRLTVKNFAALGAKPSSAASPDLSHTASATSISEAPGLAAKTSTAPRLAAKTSAAPRLAAKTSAEPRLAAKTSAAPRLTVKSFAALGAKPSSSASPDLSLCRVCLAMDVKMFDMKDFKLMEMFQNVTGLSVSDEQKSILQRVCWECAARLAAAATFKNKALLSDALLKNIADMNKSHIAKLKLMYLIVAGDEENIPKLDVVVNTENETLSEEDTESLEVSANKAEKVTIRKVGASSEQGNRLDDKQRIITLKEIDLLLAEISKKSDLSLSTCNFDIEDDCGVFLTEDKDQNNDGHNGTGFNEPGSDDYGFDDYGIADTVVLNDKDDPSEEEYVLFDNKNYSSDDIPPSEKCKQKADETAKLVKEIKDPTGPRKKGRSKKDGLTITDLTFEEQLAEIAKMQESSNHKKSFIKCTLCNKGFSEEDVYISHMLEHIDIPEDGPSCELCNVRFASSEAFQRHLSVSARHNTDKDSKEPNQRKTDRKRSARDKDGDIDGMRESKMQKVEGQIPCEQCGVELEGSWAYYIHFRREHPDKNRTKYPSMKYPCMCEVCGRFFQSQTHLTEHIWTHKDENPFRCDPCGKVFSSKRNLTLHQRGHSQERPSYECELCGRSFSNSSNRQRHMMAHGVEKPYKCEMCGKAFRFPSEKQDHVNFVHLKKPWPSRSRELLGYDTVQIEEDTDNYMEYKIMYLQEKRYCTLRLKKGIVPHKFQCRNDTKLQPRTGKKGVLKRKALVAIEDIPMAPPAKLCVCRGCLALDVKMFDMKDFELREMFQNVTGLSVSDNTALTHHRVCWECAARLTAAATFRDKALLSDALLKDIAHMKKSDIATLKQNYSMLKSRLTVFTALTPIIKYEEIDKETVSNDEAESNEIKTEEMEFEEHDPWINIPFKIESNLITENAFKTQTHLNDDSIFKDDIESDKANITTLENNHSLVTSHLINSTAFKQTINENKAKETAANDNTTVLKQTTIKQENQDTDLDHNEPWEDISFKLEIESDITAENNAKSYTNNVSTCKEDSGLDIRTIDLQNDFEEDVKMSDNLVLNDDSNVIVNITGVDDTVKKSKLNIVRITADEISSEEDTQCLAELVSVRKARRKDKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01027390;
90% Identity: iTF_01027390;
80% Identity: iTF_01027390;