Basic Information

Gene Symbol
-
Assembly
GCA_949319445.1
Location
OX439366.1:11160754-11163150[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 9.3 1.3e+04 -2.6 0.0 4 19 164 179 163 194 0.84
2 5 2.2e-09 3.1e-06 28.2 0.2 1 45 267 313 267 314 0.93
3 5 2.5e-07 0.00035 21.6 0.1 2 44 321 367 320 369 0.95
4 5 1.8e-11 2.5e-08 34.9 0.0 1 43 373 415 373 417 0.97
5 5 1.1e-05 0.016 16.3 0.0 3 45 425 469 423 470 0.92

Sequence Information

Coding Sequence
aTGAACATCGATGACCTTGAGATTGATTCTGAGACCGACTCAGAAATTGACAGTGATGATGATCCGCTATTGGAACCTAATCACTTAAGACGTCTGATGGACGATGACGACGACAGGCATAGTGTGCGGATGCCGCCTTCCTACCACAACTCGTCGACCCAACGGTCCCACAGTACCTGTACAATAGACAGTGAATTAGCTGCAGCTGAGTCTCAAATAACATTTGCCTTGTCTACAAACAAACTGTTAGACGAAAAGATAAGTAAACTGGAAGCAATTCTTCCTCCACGTCTAAATGAGTTGCGGAAGATGCTGGCAGCAGTTCAAATTAGAGATAGTGAAAATGAGAGAAATGAAACTTTCCGCTACATCAATTGTGGTAGGCCCTACTTTAAAGATAAACAGAACTTTCCAGCTCCAGACAATGATGATGCCAAAATGGCTAAGTCACAAATGTACGACTTCTCCTTAGTAATTTCAGCACCAGGATGGACAGTAAAAGACAAATCTGAACTGATCAGTATGATCCACAAAATGtcaatagatattaaaaaaaatgagttgTATGCTAAAATTGCCGACTTGAAACGCAAAACAGAACCTACAAAGAaacaagaaaaagaaataatggCCATTAGGAAGGAAATtgataaagtaagtaaattgcCTTTGAGTAAATTGGCTCTTCCAATAGATCAGGAGTATGATTGGGACATGCTAGCAAATAAGTTAAACAGAAGACACACAGCCCAAGAGTACCAAGCCCTCTGGAAGTTATTCTTTCATCCTACAATCAGTAAAAACAGTTGGAGTACAGCTGAACATGCCAAATTGTTGCAAATTGCTTGCGAAAATCGTAGACAAGACTGGGAAACTATTGCCCAAAAACTAAACACTGGCCGGACTGGGTATCAGTGCTTTGTGTACTTCCGGACAAATATGAACAACTCCTTTACTGGAAAGAAATGGACCAGTGAGGAAGTAACATACCTTAAAAGATTGATAGAATATTTCAAAGAAGACTTTTATATTCCATGGGGGAAAATAGCTGCTGCAATGGAAAATCGCACTAAAATTcaaatctataataaatatatgagGCTCATCGAACTAAGAAAAGGCAGGTTCCTTCCTGAGGAAGATGCAGTCATTCTTAACTGTGTGCAAAGATTTGGacctaactttaaaaaaatggtagaCTATTTACCCGGACGATCTATGGTTCAGATACGTGCCAGATATCAAGTCCTAAGCAAAATGAGAGTGTCAACTGTTTGGACTGTTGAAGATGACAAGAAACTTATTCAATTGATGAGAAACCAAGAGTCTAACATGAACTTTTCAACAGCTACACAATATTTTCCAGGTagaaacagaacaaaaattAGAACTAGATATGTTACTTTAATGAAATGGTTGAAAAAACATCCCAATTTAGGTTTGGAACATGCACCGAGACGAGGAGCACGACGTTTAAACCATGGGCGGCCCAGTGAAAACTTAAATGATGCAGTTGAGAATTTGAAAAACTCTTTAATCACAACAGTTGAAACAAGagtcaagaaaaaaaagataaattatgaGTCTACACATATTGACTTAGATGATGCTATTGCTGTATTTCTTGTCAATTGTTTAATAAAAGAAACAGAAGCAGAATCCAAGAAAAACAGTCCCGAAAGTCAGTTAGTTTTAGGTCCTGGCCTCATAGTCTCTGTTTCAGACCTGAATATTACAAACTTGCGcaaaactataatatttttaaatgcttGTCTAGATGAGGAGAGATATTCAGACAGCAACTACTGTGTAGATTATCCAGCTATTGGAGATAATAGTCAAGATGTTAGTTTAGTTAGAATGAAATCTTATTCTCGGAAGAAGTCGAGCCACACATTAATGGTTGGAAATCCACCAAATGTTTGGGGAAATCCTCAGTTGTTTGAGGGCGCACGTACCAGGGCACAACGAACTTTTGTATTACCTCCACAACTGGCGACTATTACTGGTATGAAAGGAATACTAGCGTGTGTGTTGGATCATGGACAATACAGTGACTCTATTAACCTGTATGTCCTTTGTAGGCGGAATGCATTATTGAAGGAACAATTAGACCTGGTTCTGGAACGATTCTATGTGTTGTTCACTTGGGCTATGATATTATCTAATGAGGGACCTAGTAATACTGCAAAAAAACCTCGGACAGATTCTGTTTATATTAGACCACCAACATTGCCAAGTGCGCCTGAAGTTACAATCAATGTTAAGTGCATgaagaaatttaaaattaaaggtGTCACGGAAAGTATTGATCTGAATGAAGATGATGCCAAGAAAGCTGTCATTGCTGTTGAAGATACTAGTACTGAAGAAGTAGCAAACCCTTTTAGTGATTAA
Protein Sequence
MNIDDLEIDSETDSEIDSDDDPLLEPNHLRRLMDDDDDRHSVRMPPSYHNSSTQRSHSTCTIDSELAAAESQITFALSTNKLLDEKISKLEAILPPRLNELRKMLAAVQIRDSENERNETFRYINCGRPYFKDKQNFPAPDNDDAKMAKSQMYDFSLVISAPGWTVKDKSELISMIHKMSIDIKKNELYAKIADLKRKTEPTKKQEKEIMAIRKEIDKVSKLPLSKLALPIDQEYDWDMLANKLNRRHTAQEYQALWKLFFHPTISKNSWSTAEHAKLLQIACENRRQDWETIAQKLNTGRTGYQCFVYFRTNMNNSFTGKKWTSEEVTYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIELRKGRFLPEEDAVILNCVQRFGPNFKKMVDYLPGRSMVQIRARYQVLSKMRVSTVWTVEDDKKLIQLMRNQESNMNFSTATQYFPGRNRTKIRTRYVTLMKWLKKHPNLGLEHAPRRGARRLNHGRPSENLNDAVENLKNSLITTVETRVKKKKINYESTHIDLDDAIAVFLVNCLIKETEAESKKNSPESQLVLGPGLIVSVSDLNITNLRKTIIFLNACLDEERYSDSNYCVDYPAIGDNSQDVSLVRMKSYSRKKSSHTLMVGNPPNVWGNPQLFEGARTRAQRTFVLPPQLATITGMKGILACVLDHGQYSDSINLYVLCRRNALLKEQLDLVLERFYVLFTWAMILSNEGPSNTAKKPRTDSVYIRPPTLPSAPEVTINVKCMKKFKIKGVTESIDLNEDDAKKAVIAVEDTSTEEVANPFSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-