Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_949319445.1
Location
OX439363.1:12562207-12595354[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.1e-30 2.3e-26 93.0 0.1 1 89 280 366 280 366 0.96

Sequence Information

Coding Sequence
ATGCAGGGTGACGACCCTCCATTCTTGCCAGTGGGTACAGATGTTAGTGCCAAATACAAAGGAGCATTCTGTGAAGCTAAAATAAAGAAAGTTGTAAGAAATATTAAGTGCAAGGTTACATTAAAAGCTGGAGGTGGCTCCATCACAGTGAATGATGATGTAATTAAGGGCACCCTGCGAGTTGGGAACATAGTGGAAGTGAAGCAGGATCCTAAGAAGGATCCTATGGAAGCTGTCATCACAAAGATACAAGATTGTAGCCAGTATACTGTTGTGTTTGACGACGGTGATATAACAACGCTGCGGCGGTCAGCGTTGTGTCTCAAGAGCGGGCGGCATTTCAACGAGAGCGAGACTTTGGACCAGCTGCCGCTTACGCATCCGGAGCACTTCTCTACACCTGTGATAGCTGGGCGGAGGGGGAGACGCGGCAGAGCACAGTCTGATGAGAGTGAGGGCTCCGGGTCGGGGCGGCGCGTGAAGGCCGACGTGGAGCCCCACGTGGGGCGCGTGGTGCTGGTGgaggcgggcggcggcgcggagcGGCGGCGGCCGCACCAGCCCGCCTTCCCCGCGCTCGTGGTCGCGCCCACCGCGCAGATCAAGGTCAAGGAAGACTACCTTGTGCGATCCTTCAAGGATGGCAGATACTACACGGTTCCCAAGAAGGAGGCGCGCGAGTTCCGCAAGGGCAGCGCGCCGCTGGAGTGGGCGGGCGTGGACGCGGCGCTGCAGTACCTCAACAACGCCGTACTGCCGCCGCACTGGGACCGCGATGCGCTGTTCAACGAGCCCAGGAACACTTCCGATGATAGTTCTGATGACGAACCTCGCGAGGAGAAGGACCACTTCGTGGCGCAACTGTATAAGTTTATGGACGAGCGCGGGACGCCTCTCAACAGGAACCCCACCATCGCTAACAAGGATATAGACCTGTACAGGCTGTTCAAAGTCGTGGAGAAACTGGGTGGCTACAACCGGGTGACCAACCAGAACCAGTGGAAGACCATTGCGGACAAGATGGGATTCCACCCTGTCACCACAAGCATCACCAATCTTTGTAAACAAGCCTATAAAAAGTTCCTGCACAGTTACGAGGACTTCTACCGCAAGCTGGGCGTGACCCTGGTGGCACACCCCCGAGGCGCGCGCACCCCTCCCGCCGGCCGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCGTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGGTACGCTCGCTCATCCGCGACCGCGACCGACAGCCGCCCGCCTCGTCCTCTGCTTCCAGCTGCTCCACGCCCACTCCACCTGCGCCACAGCGAGGCAAAGACAAAGATTCCGACAAAAGTGAGACTGACAAGAGCGAGAAAAGTGACAAAGATGAGAAACTAGATAAGATGAAGGAAAAAGCTCGCATCAGCGACGAAGAAGACAGCGCTGACAACCAACCACTTATTAACACTGCACCCAAGATAGacaaagagaaagaaaaagaaaaggagaaagaaaaagaaaaagaacgagagaaagaaaaagagagagagaaggaaagagaaaaagaaaaggaaaaagaaaaagaagagaaaTTAAAGGAAAAGGAGAAAGAAAAAGAGAGGGAGAAGGAGAAACAAAAcgagaaagaaaaagagaaggaaaaagagaaagaaaaggagaaggagaaagaaaaagagaagGAGCgagaaaaggaaaaagaaaaagaaaaggacAAGGAAaaagacaaacaaaaagaaaaggaaaaggacaaagaaaaggaaaaagataaagaaaaggaGAAGGacaaagaaaaggaaaaagaCAAGGACAAAAGCTCGGCGTCAACCAGCACTAGTGAGGAAAAGGAGAAGGTGGTGGTGAAGCCTCGGTCGCAGTCCAAGGGTCGTACTATCACGCCGGTCAGGACGGAACGCGACAAGAGGACGCCGAAAAGACGCCCCTTGTCTTCCAAGAGTGAAGGCATGAGTGCGGGGACGTCGCGAGCTTCTCGACGCCCGCACGCTTCCACAGACAGCGACAGTTCTGGACGGGCTTCAAGATGCGGTCCTATAAAGAAGATGCAAAGCCGCCGCAGCCAGAGCGCTAACTCGGCGAGCAGCGGCAACACGATTAATTCGAACAGCAGCAAACGACCGCGCAAAAGGAAGAACACAGAGCCTTCAACAAATGAGCCAACACCTCGGTCCGGAGTATCAAACGTGAAGGCTCAAGTGGGTGACAAGTTGAAAGTGTACTATGGACCCACCCAGTCCGAATCTAAGGTGACGTACGAGGCGAAGGTGATCGACAAGACGGCGACGGGTGACCTGCTGCGCGTGCACTACACCGGCTGGAACACGCGCTACGACGAGTGGATCAAGCCGCAGCGCATCGCGCTCAACGTCACGCAGCATGAGCAGCGCAACAAGAAGGGTTCGGGTATGAGCAGGCGAGTCCGAAGCAAGAGAATCGAAGAATCGTCAGCGCGATCTGATTCTGACAGTGACTCGGAAAGCGACGATGACGTCAAGAGGCCGCCTAAGAAGTCTGACGAAAAATCGAGCTCAAAAACCACATCTAGGTCTAAAGACGTGAAGTCGAGCGACAGCAGCAGTTCGAGCAAGCCCCGCAAGCGGCCGGTGCGCACCGTGTCCACGCCCACGTCCGCGTCGCCGCCCAAGAAGACGCGGCCCAGCGCCGGCCACCAGGGCCGCGACTACGACCTCAACGAGATCCGCTCCGAGCTCAAGGGGCTGCACACCGTCAAGACGGAGCCCGACGACGCCAAGCCGGACGCCGACAAGGactcgccgccgcccgcgcccggcgCGCCGCCACCCGAGGCCATGCAGCTAGACAAACAACCCGAAGACGTCTACGAGTTCAAGGAACCAGAGCCTTTCGAACTAGAGCTGCATGACGAAAAGAAGAAGCGCACTCATCGCATTTTTGATGATATATCACCGAGCAAATATACGTCTACTCTGTCCAAGTCGTTGAGTGAAGAAATCTCAGAAGACCCATTGCGACCGCGGCCTTCGACCCTCAGATCTCCTTCTTTATCTCCTTTTAGAGATTTCGGCGCAAGCCGAGATGCTAGCCGCCAAAGCCCTGAAGATGATTCTAAGGACGGACTGTTCTCACTAGACGATGACTCATTCCCTGGTGACGGCAGCTCAGGACCCACCTTTGAAGGCTTCACTCCAGCGAAAAACCAAGAAACATACTCCAAGAAGAGCAAAGTATCAAAGTTGAGAGAACTCATAGATGACTCCCCAGACAGTCCAGCAGACGATGAACAATCTTCAGATGATGAACCCGAAGATATAACAATAAAAGAGGAAACAAGAGAACCGACTCCAGTATTAGCAGTCATTGAGCAACCTAAAACCCCAGAGACTCCTGTAAAAGTTGAACCAAAGGAGCCGGAACCTGTCGAACCCATTCCTGAGCCCGTAATAGCAGAAATCAAAGAAGAACCTAAAGAAGACATTCCCGAGCCGCCAAAGACGCCTCCGCCACAAAAGAAACCTGATACTTCACCTTCCAAAACGAGCACACAAACTACGACCACGGTCTCTATTCCTAGTATAACTGTCACTGCTGCAACCACGTCAGAAACTAAAATAGAAAATACAGAGAAACCAAAGAAAGAGGAGCCATTTAAGCTTCTCTCTGTTGCTATACCTGTCatggaagaaaaacaaaaagaaaacacactcaaacttaaaattgaaaagaaaCTGGATCCTGTGCCGGTAGAGCCTGCTGTATTGAAGCTGCAGCCTCCATCGAGTCCTTTGATCGATACGGAAGAAGATAAGTCGGAGCCGGACAGTCCTGCAAGGATCGATGTACTTCCGGAGCCACCGCCAGGATTCTTACTACAGTCTGAAGGACCTAAAATAGCGGAGAAATTGCTCAAAGCCATCAGCAGTGCTAAGAGACTTTCGATGTCTCCCCCGCCCATGGATGACCGCCCGGTCACGCCCAAGACCGACACTATTAAGACGCCTAAATCTGAAAGTAAACTGTCACCCATATCTCCCGAACAGAAAACTTTGAAATCAGATACGATAAAACCTTTGGTAAAAAATGATGCTACAAAGCGAGCGACACCGCCGGTCGGTGCAGAGACGATATTCGGCGAGCCATCTAACTTACTCGATATAAAGCGTGATTTACTCGACGTTAAGAAGGTGAAGCCCGAGGAAGTCGTGCCTCGGCTGCAGAGTCCGCTGAACATCCTGGAGCGGCGCAAGAGCGTGGCGGAGCTGCCGCTAAGCGTGCCCGGGAAGAACAACAAGGTGCTGAGTGACACCATCCAGAAGTTGTCGAGTCAGATCAACCAgtccgccgccgccgcggccgCCGCTGTGCCGTTGCCCTTCCCCAGCGACGAGCGCACCGACTCCAGCGACTCCGACGACTCGGACAGGAGGTTAATAATCGACAAACTAGTCGTCGACGAGTGGGGCTCGTCTCCCGCGCACAGCACGCACAGCACGCACAGCGCGCACAGCCCGCACGGCGCGCACGGCACGCTGGCGGCGCTGGGCTCGCTGGCGGCGCTGGGCTCGCTGGGCGCGCGCGCGCTGCACGCCGGCAAGTCGCCCGGCGAGTGGAGCGCCGGCGAGTCGCTGCTCATGCTGGAGGACGCCTGCAAGAACGAACGGAAACACAGCGCAAGCGTTGTAGTAGCGGGTGGGCCACGGGAATCTTTGCCGACGCGGGACGCTCGGGAGGCACGCGAGGTGCGAGAAGGACGCGAGATGCGAGAAGGCCGCGAAATGCGAGAGGGACGAGAGATGCGCGAGGTGCGCGAGAGCCGCGACGAGGACGGCAACATCTCGCTGCTGCTGTGCGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACGCCGAGCCCGCACCGCCGCGCCAGCGCCTGCACATGCCCTTCGCGTCCGCGCTGCCGCACCAGCACACCAAAGGTAACCACAACATGTGCGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACGCCGAGCCCGCACCGCCGCGCCAGCGCCTGCACATGCCCTTCGCGTCCGCGCTGCCGCACCAGCACACCAAAGGTAACCACAACATGTGCGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACGCCGAGCCCGCACCGCCGCGCCAGCGCCTGCACATGCCCTTCGCGTCCGCGCTGCCGCACCAGCACACCAAAGAGGAGCGGCGCCCAGGAGCGGGCTGCGGAGGAGGCGGCGCcggggcgggcggcgcggcgggcggcgcggagGCGGCGCGCGAGGCgtggccgcgccgcgcgcccgaCCACACGCCGCCCACCACGCCCGACAGCAGCCTCGACCTGTCGCCGCCGCACAGAGAGCGTCGTATATCTGAGCGGGATAGCCCTTCGGAACGCAAGGAGGACGAAGACGAAGGCCGGGTCAACGATGCGGCGTCGCTTGACGTCGAAAAGGCACATGGCGGAGGGCGCTCGCGCAAGGCGTCGGAGAGCTCGGGGCCGGGCGCGCGCGGCCGCTcgcgccgcacgcgccgcgACACGGACGACGcgcacgcgccgcacgcgccACACGCGCCACACGCACCGCACGCGCACCACGCGCATCACGCGCACCATCCACCGCTCAAGTACAACTTTTACGTCGAATTGGATCCTTCGTGGGACTGCCAGACGCGCATCAACGTGCTGACATCACGGCTCGCGGACCTGCGCAAGGCGTACCACTCCGTGAAGGCGGAGCTCGCGGCCATCGACCGACGACGCAAGAAGTTGCGCCGGAAGGAGAGAGAAGGTCGGTAA
Protein Sequence
MQGDDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGSITVNDDVIKGTLRVGNIVEVKQDPKKDPMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDESEGSGSGRRVKADVEPHVGRVVLVEAGGGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVDAALQYLNNAVLPPHWDRDALFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDERGTPLNRNPTIANKDIDLYRLFKVVEKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSYEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQVRSLIRDRDRQPPASSSASSCSTPTPPAPQRGKDKDSDKSETDKSEKSDKDEKLDKMKEKARISDEEDSADNQPLINTAPKIDKEKEKEKEKEKEKEREKEKEREKEREKEKEKEKEEKLKEKEKEKEREKEKQNEKEKEKEKEKEKEKEKEKEKEREKEKEKEKDKEKDKQKEKEKDKEKEKDKEKEKDKEKEKDKDKSSASTSTSEEKEKVVVKPRSQSKGRTITPVRTERDKRTPKRRPLSSKSEGMSAGTSRASRRPHASTDSDSSGRASRCGPIKKMQSRRSQSANSASSGNTINSNSSKRPRKRKNTEPSTNEPTPRSGVSNVKAQVGDKLKVYYGPTQSESKVTYEAKVIDKTATGDLLRVHYTGWNTRYDEWIKPQRIALNVTQHEQRNKKGSGMSRRVRSKRIEESSARSDSDSDSESDDDVKRPPKKSDEKSSSKTTSRSKDVKSSDSSSSSKPRKRPVRTVSTPTSASPPKKTRPSAGHQGRDYDLNEIRSELKGLHTVKTEPDDAKPDADKDSPPPAPGAPPPEAMQLDKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRPSTLRSPSLSPFRDFGASRDASRQSPEDDSKDGLFSLDDDSFPGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRELIDDSPDSPADDEQSSDDEPEDITIKEETREPTPVLAVIEQPKTPETPVKVEPKEPEPVEPIPEPVIAEIKEEPKEDIPEPPKTPPPQKKPDTSPSKTSTQTTTTVSIPSITVTAATTSETKIENTEKPKKEEPFKLLSVAIPVMEEKQKENTLKLKIEKKLDPVPVEPAVLKLQPPSSPLIDTEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAISSAKRLSMSPPPMDDRPVTPKTDTIKTPKSESKLSPISPEQKTLKSDTIKPLVKNDATKRATPPVGAETIFGEPSNLLDIKRDLLDVKKVKPEEVVPRLQSPLNILERRKSVAELPLSVPGKNNKVLSDTIQKLSSQINQSAAAAAAAVPLPFPSDERTDSSDSDDSDRRLIIDKLVVDEWGSSPAHSTHSTHSAHSPHGAHGTLAALGSLAALGSLGARALHAGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGGPRESLPTRDAREAREVREGREMREGREMREGREMREVRESRDEDGNISLLLCEETIPGSPAPDAEPAPPRQRLHMPFASALPHQHTKGNHNMCEETIPGSPAPDAEPAPPRQRLHMPFASALPHQHTKGNHNMCEETIPGSPAPDAEPAPPRQRLHMPFASALPHQHTKEERRPGAGCGGGGAGAGGAAGGAEAAREAWPRRAPDHTPPTTPDSSLDLSPPHRERRISERDSPSERKEDEDEGRVNDAASLDVEKAHGGGRSRKASESSGPGARGRSRRTRRDTDDAHAPHAPHAPHAPHAHHAHHAHHPPLKYNFYVELDPSWDCQTRINVLTSRLADLRKAYHSVKAELAAIDRRRKKLRRKEREGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-