Mimp044408.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- nfxl1
- Assembly
- GCA_905147345.1
- Location
- LR990361.1:24498701-24501181[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.75 4.8e+04 -3.7 0.2 9 11 84 86 83 87 0.73 2 22 1 6.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 3 22 0.0053 3.4e+02 3.2 0.3 4 10 169 175 168 176 0.97 4 22 1.6e-07 0.01 17.6 15.9 3 19 186 202 185 202 0.95 5 22 0.79 5.1e+04 -3.8 0.6 6 10 227 231 226 231 0.78 6 22 1.3e-08 0.00086 21.1 11.1 4 19 240 255 237 255 0.92 7 22 0.78 5.1e+04 -3.8 1.6 6 10 280 284 279 284 0.89 8 22 8.2e-10 5.4e-05 24.9 12.5 1 19 290 308 290 308 0.99 9 22 3.9e-06 0.26 13.2 19.8 3 19 345 361 337 361 0.86 10 22 0.62 4e+04 -3.4 0.4 7 11 365 369 365 369 0.84 11 22 1 6.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88 12 22 3.3e-05 2.2 10.2 20.3 1 18 395 412 395 413 0.97 13 22 2.2e-10 1.5e-05 26.7 14.0 1 19 422 440 422 440 0.99 14 22 0.0001 6.7 8.6 6.4 9 19 488 498 486 498 0.89 15 22 0.0077 5e+02 2.6 7.6 3 12 509 518 508 518 0.87 16 22 0.2 1.3e+04 -1.9 3.4 14 18 547 551 547 552 0.85 17 22 0.061 3.9e+03 -0.2 0.5 7 12 567 572 567 579 0.83 18 22 2.7e-06 0.17 13.7 4.8 1 11 588 598 588 599 0.97 19 22 0.34 2.2e+04 -2.6 1.5 15 18 613 616 612 617 0.82 20 22 0.00068 44 6.0 15.6 4 18 630 645 628 646 0.86 21 22 1.1e-06 0.073 14.9 13.4 1 18 687 705 687 706 0.89 22 22 1 6.5e+04 -4.6 1.1 6 10 736 740 736 740 0.89
Sequence Information
- Coding Sequence
- ATGGCGCGCCGATACAGAGACGCTGCCGCAAAATTGCAGCAAAACGTCCAAAAACATCTAAAAGAAATGAAGGAACTGTCCTCGTCTGAAGATGAGGATCCTTGCGAGTCCAGCGTCTTGGAAACCATGTTCCAGAGTTACTGGCGAGGCGGCGGAGATACTCAAATGTTGAACAGGACCAAAAACATTCTTGAAGAAGCCATAAGCGGCCGCTCTGTAACTTGTCTCATATGCATATCGTCGATTAAAAAATGTCACGCTATTTGGACTTGTAGTCATTGCTTTGCCTACTTCCATCTCTCTTGCATCCAAAAATGGTCGAACGATAGTATAAGCTTGCGTAGTGAAGAAAGTACTGGCCCGATAGCTGTGATAAAACAACAGAAAATCGAATGGTGCTGCCCTAAGTGTCGAAACTCTTATTCTAAAGAAGAAATACCTCGAAAATATCGTTGCTTCTGCGGTAAAACTGATGACCCACCGCAGCATCCTTGGCTCATTCCTCATACCTGTGGTGAAGTCTGTGGAAAGAGGTTGTCTACTGGTGATAACTGTAAACACAAGTGCTTGCTTCTATGCCATCCTGGTCCATGCCCCCCATGTCCACAAACTGTTAACGGGATATGTTTCTGTGAGAAGGAACGTAAGAGAGTGAGATGCAGTGCTGCCACATGGTCCTGTGGCCAAGTTTGTAAGAAAACTCTTTTGTGTAAGGCTCATTATTGCAAAGATGTCTGTCATTCAGGTGATTGTCCACCATGCAGCTACACAAGTATTCAGCCATGTCAATGTGGTGCTGAGAAAGCTAAAAGACCATGCAATGATCCATTTTGGCAGTGCAAGAAGCTGTGTAACAAATTATTTTCATGTGGTTATCACAAATGTGAACGAATCTGTCACTCTGGGAACTGTGGGGACTGTCCTAATTCTGGTACATTATCATGTCCTTGTGGTGCTAACCAGCGTTTTGTTCAATGTCCAGATGTCATGGAAACCTGCCTAGGCACATGTGGTAAAAGGCATGAAGGTTGTGAACACAAATGTCCAGAAAAATGCCACAATGGTAACTGTCCACCTTGCCAAGTTTTAATTGAAAAGAAATGCCACTGCTCAACACATACAAGGTCCTTACCATGTAGCAAAGATTTCAAATGTGAGACTAAATGTAGAGGAATAAGACTGTGCGGCAAACATGGTTGTGGAAGAAAATGCTGTAATGGAAACTGCCCTCCTTGTGAGAAAACATGTGACAAAGGCCTCCAATGTGGTCGGCACAAATGTACAAATATCTGTCATCGGGGACCTTGTTATCCATGCCCTTTAGAATCGAAAGTGACCTGCAGATGCAAAGAAACTTATGTAAGAGTTCCATGTGGTCGGGAACGGCAGACCAAACCTCCAAAATGCAACTTACcatgcaaaataaaatataaatgtggGCATAGTGAAGAAAATAAGCATTCCTGTCATTTTGGTGATTGCCCCCCTTGCAAAGCAATCTGTGACAAACAATATCCAAATTGCACTCATCAATGTAAAGCAGTTTGCCATGAATATGTTGCCGTGCTGTTCAAACAGGTTGAGAAACCTGCTACACCATGGGAAGTGCAACCACCAAAGACCAAGATAATGACCCTAGAATGTCCACCATGTGACACACCAGTACCAATAGTTTGTTTTGGAGAGCATGAGATAGACCAGCAACCATGCCACACAGCTTCTAGGAGGCCTTGTGGAAGAGAATGTGGAAAACCATTGGCATGTGGTAATCACAAATGCTCTTTACTCTGTCATTTGTATAGCCCAGATCCTGCGTACCCGAATGTGCCTTCGAGTTGTAAGCCATGTAACAGAGAATGTTTAGTTCAGCGTCCTGCGAAATGTGCTCATAAATGTTCCATAAGGGCTTGTCATCCTGGTCCATGTCATCCGTGTGAGATATTGGAACGACTAGCCTGTCACTGTGGTGTGACAGAAATATACCTGCGTTGTCGAGAATTGTCAACAGCTACTGAAGAAATGTTATCATGCAAGCAACAATGTCCTAAGAACTTAGACTGTGGTCACCGCTGCCGTAACACTTGTCATTCGGGACCTTGCGGTAACCAAGTTTGTACTAAGAAAACTAAAGTGCACTGTCCttgtggaaacattaaaaaggaGGCTCCATGCAACTCTGTTAGAACTGGAGAGACAAAGATGATGTGTGACCAAACCTGTGAATCTAAGAAAAAGGCGGCTAAAATAGAGcaagagaaagagaaacaaagaTTAAAAGAATTAGAAGAAGAGAAGAATCGTAAAGAGTTAGCAGAGTATGAGTGGAAACTAAGCGgtaagaagaagaaatacaaGGAAAAGAAGATGGTTGTTGGTAAAGATGACCGTGGCTTCCTGAAGAGGTATTGGGTTCCAATATCGTCATTCCTAGTTATGATGCTAGCCtcgatttattatatattttatgtaggacTGGAATAG
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEDPCESSVLETMFQSYWRGGGDTQMLNRTKNILEEAISGRSVTCLICISSIKKCHAIWTCSHCFAYFHLSCIQKWSNDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGKTDDPPQHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAATWSCGQVCKKTLLCKAHYCKDVCHSGDCPPCSYTSIQPCQCGAEKAKRPCNDPFWQCKKLCNKLFSCGYHKCERICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEGCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGIRLCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAICDKQYPNCTHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLECPPCDTPVPIVCFGEHEIDQQPCHTASRRPCGRECGKPLACGNHKCSLLCHLYSPDPAYPNVPSSCKPCNRECLVQRPAKCAHKCSIRACHPGPCHPCEILERLACHCGVTEIYLRCRELSTATEEMLSCKQQCPKNLDCGHRCRNTCHSGPCGNQVCTKKTKVHCPCGNIKKEAPCNSVRTGETKMMCDQTCESKKKAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVPISSFLVMMLASIYYIFYVGLE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_01440670;
- 80% Identity
- -