Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_905147345.1
Location
LR990350.1:26670996-26684959[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.9e-06 0.014 17.3 0.0 2 34 295 330 294 336 0.84
2 2 2e-10 3.7e-07 31.9 0.1 2 43 376 422 375 424 0.87

Sequence Information

Coding Sequence
ATGCGGTGGTGTTTACTGGGTTTATTTACGCTCATATTGGGCGCGAAGGCGTGGGATGACGGCGACTTGGAAGTGTTCGACGTGGTTGAAGAAGTTAACCAGAACTTTTACGAATTGCTAGGTGTTGCACAGGATGCTTCACCATCAGAAATCAAGTCTGCATTTAAAAAGCTTACACTGAAACTCCACCCTGATAAGAATGACTCGCCCGATGCAGACATGCAATTCAGGAACCTGGTGTCTGTGCACAACATACTCAAGGACCCAGGGAAAAGAGAAAAGTATAATGAGGTGCTCAAGAATGGTCTTCCAAACTGGCGATCCGCCATATATTACTACCGGCACGTGAGGAAAATGGGCCTGGCTGAGGGCTCCATCATACTGTTTGTTATCATCACATTTGGCCAGTATGCTGTTGGCTGGGCGGCTTATGCTGAGAAGAGGTTCACTGCGGAGCAAATACTGAACAGCAGAGGCAAAAGGCACTCCAAACGGTCAGGCTTCGACCAAGGGATATCAGATATCTTAGACCAGCTCCCCAAACCCAGTGTGAAAGACACGTTGCCGTTCCAAATACCCCGGTTTACGTGGTGGTTGGTGACTGCTATACCCTATGGAATCATAGAGTTAAGGAGACAGTTAAAAGAGAGAGAAGAAGAAGCTAAGAGACAGAAGAAAAGGGAAGAAGAAGAACGCGCCCGCGCAGACCGCGAGGCGGCGGCCGCGGCGGAGGCCAAGGCGGCCGGCGGCGGCGTGCGCAAGCGGCGCGGCTTCGTGCCGCCCGCGAGGGACGCAGACTGTCTGCTGGACCCGGCCGACGAGCCTGACGGGGGACCTGTCGTCGTGGCTGTTAAACAGCCCACCGCCCCTGTGATAACGGGTGGGCTGTGGACGGACGACGACCTGGCGGAGCTGGTGCGGCTCGTGAAGAAGTACCCGGGCGGCGCCGCGGAGCGCTGGGAGCGCATCGCGGACGCCATGGCGCGCAGCGTGCCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGAGAACTGCTACAAGATCCCCGGCCAGGAGCCCGACCTGCCCGTCGCCGTGGAGCCGCCCAAGAAGGTAAAAACGCGCAAAGCGGAGGAGACGTCGGGCGGCAACTGGTCGCAGACGCAGCAGAAGGCGCTGGAGAGCGCGCTCGCCAAGTACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATTGCCAACGCTGTGCCTGGCAAGACCAAAGAGGAATGCATGCAGAGGTGTAAATATCTATCAGATATGGTCAGAAGACAGAaacagaaagaagaagaagcccaGCAGAATGCAGAAGGTGAAAACATCACAGAAGATCAACAAGACGAAGAGTGA
Protein Sequence
MRWCLLGLFTLILGAKAWDDGDLEVFDVVEEVNQNFYELLGVAQDASPSEIKSAFKKLTLKLHPDKNDSPDADMQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGSIILFVIITFGQYAVGWAAYAEKRFTAEQILNSRGKRHSKRSGFDQGISDILDQLPKPSVKDTLPFQIPRFTWWLVTAIPYGIIELRRQLKEREEEAKRQKKREEEERARADREAAAAAEAKAAGGGVRKRRGFVPPARDADCLLDPADEPDGGPVVVAVKQPTAPVITGGLWTDDDLAELVRLVKKYPGGAAERWERIADAMARSVPEVTHMAAKLKENCYKIPGQEPDLPVAVEPPKKVKTRKAEETSGGNWSQTQQKALESALAKYPKGGAGDRWQKIANAVPGKTKEECMQRCKYLSDMVRRQKQKEEEAQQNAEGENITEDQQDEE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01075387;
90% Identity
iTF_00810014;
80% Identity
-