Basic Information

Insect: Mythimna impura
Gene Symbol: -
Assembly: GCA_905147345.1
Location: LR990341.1:32258205-32267044[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-07 0.00013 23.4 0.0 2 38 16 53 15 59 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-07	0.00013	23.4	0.0	2	38	16	53	15	59	0.89

Sequence Information

Coding Sequence: ATGCCACGAACATATGTGAGAAAGTCAAATAGGCTGCAGTGGTCGGAGTCAGACATGCTTTTAGCCATAAATTCAGTGCTGGAAGGCAGAATGGGATATCTTTTAGCGTCACACACATATAGTGTACCCAAAAGTTCCTTGGAAGATCGTATCAAGAAGATCAAAGCTGGAAAATCCAAAGACGAAGTGTTTCGGAAGTGCCCTGCTACTGCAAAATGCGTCTTCACCGATGAGCTGGAAGGTATGCTAGTTGAACATATCAAAACTATGGAATCTCGACTATTTGGATTAACTAAAACAGATCTGCGACTTTTGGCATTCCAATTGGctaaaagaaataatttgaAACATCCTTTTAATGTGGAAACTGGACTCGCTGGCTTAGATTGGGTTAGTGGATTTCTAAAACGACATTCTGAATTGTCACTAAGATCACCTGAAGCTACATCAGCTGCAAGAGCAATGGGCTTTAATAGAGCTGTAGTGTCAtcgttttttaatcttttagaTACACTTTATGCAAAGCACGCTTTCAAATCCACAAGAATTTATAACATGGACGAGACTGGATTGACCTCTGtaccaaaaaaaattggaaaaattaTATCGGTCAAAGGTAAAAAACAAGTTGGTGCCATAGCTTCAGCTGAACGGGGACAGTTGGTAACGGCAGTGCTTTGCTTTTCTGCAGCTGGACATTATGTTCCACTTCTTGTGATTTTTCCTCGCGTACGAATGAAGAGTGAGCTTTTGGATGGTGCACCACCAGGCACAGTAGCTGTATGCCATCCAAGTGGTTGGATGCAACAACATATTTTCACTGAATGGATGCGTCACTTTATCGGCCATGTCAAACCAAGCAATGaagatcctgtgcttctcgtcTTAGACGGTCACGCCACTCACACTAAGAACCTAGAAACTATTGAGTTAGCTCGTGCTCATGGTGTCATAATGCTCTGCTTGCCACCTCACTGCACGCATCGCTTACAGCCACTCGATGTTGGTTTTATGGGGCCTTTGAGCACGTTTTACTCGCAAGAAGTCCAATTATGGCTTCGTAATCATCCAGGGCGTGTTGTCACCCAATTCCAAATGGCATCTTTGTTTGGAACTGCTTATAATCGTGCCGCTACTATGCAAAATGCAGTGTCTGCTTTTACCAAAACTGGAATTTTCCCTCTGAATCCCAACACGTTTACAGATGTAGATTTTGCACCATCACAGACAACAGAAATATCATTTGTACCACCAACCACAAATGAATTCTCTCAGGATCCATTGCCTCATGAAAGAACTCCGTCCCCACAAGCAGGAACATCTACAGAAGGACAAACGTTTTCAAATTCTTTAAGTCTTGTATCACCGAAAGATATCATGCCGATTCCTCATTTTAAAAAGAACATGCGGCCATCTGCGCGTCGAGGAAAAACCGCAATTTTGACTGAATCACCATATAAAAATGAACTGGCAGATAAGGCTATGTCATcagtaattaaaacaaaaaaagGGGATGAAGAAGATGAAGTTGCTTCATACCTGGACGAAAAAAGTGAGCATAACACGGATTTGGAGCAAGAATGTGAAGATTTGGTTCCTACAGAACCACATCATGTAACTTTGGAGGAACCGGATCAGGTTTTAGAATCGTTTGATGAAGAGCACACGGAGTTGGGAAGTTCATATAGTGATGACGATGAAGAGCCCTTGATGAACATATCATCACAGAACTTTTACACCgATATCCTCATGCTTCTTATAAAAGATTCACGAGCAATAATTGAGAACAAAAACACCGATAcgaatacaaacaaaaagaaaaacacagaGTGGAACATGATACACCAGAAGTTTACAGAATTCACTGGAAACAAAAGAGTTGTTGCACAACTGAAAGGACAGTGGAGACGTATGAAGTTATCGGCAAAGAAAAATATGGCTCATTACAAAAGAGCAATTAAGTCTACGGGTGGCGGTGAAAAGCCACCATCACCATCACCCGAGGATCAAGAAATTATGGCTATATGTCCAGTTGATTTCATAGAAGATCAAAATGATTTTGATAGTGATGCAATTCATACAATAATTAATATGCCATCTACGAGTAGCaccaatattaaaatcatagaTTCAGCAGAAATTCAAGTGATTTCTGACAAAATGAGCTATGAAAACACACCATCTATGAGTAGCACCAACAAAACTGTTGTCTCTGATTCTGCAGAAGTTCTAGTGCTATCTGACAGTTAA
Protein Sequence: MPRTYVRKSNRLQWSESDMLLAINSVLEGRMGYLLASHTYSVPKSSLEDRIKKIKAGKSKDEVFRKCPATAKCVFTDELEGMLVEHIKTMESRLFGLTKTDLRLLAFQLAKRNNLKHPFNVETGLAGLDWVSGFLKRHSELSLRSPEATSAARAMGFNRAVVSSFFNLLDTLYAKHAFKSTRIYNMDETGLTSVPKKIGKIISVKGKKQVGAIASAERGQLVTAVLCFSAAGHYVPLLVIFPRVRMKSELLDGAPPGTVAVCHPSGWMQQHIFTEWMRHFIGHVKPSNEDPVLLVLDGHATHTKNLETIELARAHGVIMLCLPPHCTHRLQPLDVGFMGPLSTFYSQEVQLWLRNHPGRVVTQFQMASLFGTAYNRAATMQNAVSAFTKTGIFPLNPNTFTDVDFAPSQTTEISFVPPTTNEFSQDPLPHERTPSPQAGTSTEGQTFSNSLSLVSPKDIMPIPHFKKNMRPSARRGKTAILTESPYKNELADKAMSSVIKTKKGDEEDEVASYLDEKSEHNTDLEQECEDLVPTEPHHVTLEEPDQVLESFDEEHTELGSSYSDDDEEPLMNISSQNFYTDILMLLIKDSRAIIENKNTDTNTNKKKNTEWNMIHQKFTEFTGNKRVVAQLKGQWRRMKLSAKKNMAHYKRAIKSTGGGEKPPSPSPEDQEIMAICPVDFIEDQNDFDSDAIHTIINMPSTSSTNIKIIDSAEIQVISDKMSYENTPSMSSTNKTVVSDSAEVLVLSDS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -