Mimp037134.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- -
- Assembly
- GCA_905147345.1
- Location
- LR990357.1:15128158-15128526[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 1.3e-06 29.8 0.1 3 41 17 56 16 60 0.92
Sequence Information
- Coding Sequence
- atgccTCGAAATTATATAAGAAAAACCGAACGGAGCTCTTACCCGAAAGAAAAATTATTAGAAGCAGTGGCAGCTGTTAAAAGTGGTGTACTGTCGGGTTATGCAGCCTCAAAACATTATGGAATACCAAGAGCAACTATAATCAATCGGGTTTATGATCGTAAAGGTGTAAAGTCTAATACTTTGGGGAGGGCCACAGTTTTGTCGCAGGACGTAGAAGAAAACCTTGTTAAAAACTTGCACATAATGGAAAAATATGGTTTTGGCCTAACTAGAAAGGAATTGATGGAGACTAGGACTCTATGTAGAAAAGATGGCTGTGAAGAATCCGTTCAAAAATGGTGTTCCTGGGGAAGATTGGTTCCTTGA
- Protein Sequence
- MPRNYIRKTERSSYPKEKLLEAVAAVKSGVLSGYAASKHYGIPRATIINRVYDRKGVKSNTLGRATVLSQDVEENLVKNLHIMEKYGFGLTRKELMETRTLCRKDGCEESVQKWCSWGRLVP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01026050; iTF_00667318; iTF_00667319; iTF_00850586; iTF_00667325; iTF_00667326;
- 90% Identity
- iTF_01026050;
- 80% Identity
- -