Mimp035133.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- -
- Assembly
- GCA_905147345.1
- Location
- LR990355.1:29866300-29868153[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.54 1.8e+02 3.7 0.0 10 32 77 99 76 99 0.91 2 7 0.54 1.8e+02 3.7 0.0 10 32 147 169 146 169 0.91 3 7 0.54 1.8e+02 3.7 0.0 10 32 217 239 216 239 0.91 4 7 0.54 1.8e+02 3.7 0.0 10 32 287 309 286 309 0.91 5 7 0.54 1.8e+02 3.7 0.0 10 32 357 379 356 379 0.91 6 7 2.3 7.7e+02 1.7 0.0 10 32 427 449 426 449 0.90 7 7 2.3 7.7e+02 1.7 0.0 10 32 497 519 496 519 0.90
Sequence Information
- Coding Sequence
- ATGTGCAGCACGGCGCGTGTCCTGGGAGGATGCTCGGCGTGTTGCACGGCGTGCATCAAATCACTCATCCATGTGTATCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCATCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCTGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCCTCATGTCACTCACCCATGTGCAGCACGGCGCGTGGAGTGCGCGGGTGCTCGGCGTGCTGCACGGCGTGCATCATGGCGCTTGCGAGCGCCACGTACCAGCGGTCAAGGTCAGCGCGGCGGCCACTGGACACAAAAATGCGCTCGCACGCCGCGCTCAATGCCTCTAG
- Protein Sequence
- MCSTARVLGGCSACCTACIKSLIHVYHVTHPCAARRVECAGARRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLCVLHGVPHVTHPCAARRVECAGALRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLCVLHGVPHVTHPCAARRVECAGALRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLCVLHGVPHVTHPCASRRVECAGALRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLCVLHGVPHVTHPCAARRVECAGARRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLCVLHGVPHVTHPCAARRVECAGALRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLGVLHGVPHVTHPCAARRVECAGARRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLGVLHGVPHVTHPCAARRVECAGARRAARRASCHSPMCSTARGVRGCSACCTACLMSLTHVQHGAWSARVLGVLHGVHHGACERHVPAVKVSAAATGHKNALARRAQCL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -