Mimp042242.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905147345.1
- Location
- LR990360.1:22207277-22221869[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-12 4.7e-10 40.8 0.0 1 37 70 107 70 111 0.92 2 2 6.2e-18 2.1e-15 57.9 0.0 1 43 280 323 280 325 0.95
Sequence Information
- Coding Sequence
- ATGGTTCCTCTCCGCAGGCTACCGGAGGTGGGTGAGAAGGCCCCGGCGTCTTCGTCCCCGAACCTCGCGGAACAGCCGCTGGACCTGAGCGCCAAGTCTACCTCCAGCACCAGTGGCACACCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGCGCAGTTCTGGAGAGCGCCAGCAACAGTTCTGGTCGTCGTGCGTATACTGAAGAGGAGCTGTTGTCCGCCGTGCGCGACATCCAGTCGGGCCGGCTGGGCACGCGCCGTGCCGCGCTCATATACGGCATCCCGCGGTCCACGCTGCGCAACAAACTCAACAAGTTTGGCACCATCGTCGACCACGCCGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCTCCCTCCGTCATTCTCAAAATACCCACATTCCCCCCACCGGACGACAAGAGCCCGTCCCCCGCGGGACAGCTCCAAGCCCCCATCGCGCCGATAACACCGATGCTCCCCACGGGACAAACCTCACTCAAGGCGCCCTCACAGCTATTGCTCCCGCCCTCCGTGTTCGCCGACCCTCCCTCAACGCAACACCTCTTTACGTCCCTCAGTGACGTCATCGCTAAAAGCATTAGCCAGAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCCCAATGAACTGATGTACGCTCGGGGCCCTGACCGACACGTGTCTGTGATCAAGACTCCGCCTGATAACCAGCGCTACCCCGCACCCGGGAACTCCAAGCAGATGCCCAACAACAACGGTCAGCCAGCCGCTGGTGGCAAGGGTACGCGCCCCAAGCGCGGCAAGTACCGGAACTACGACCGCGACAGCCTAGTGGAAGCCGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTACACCGCGCCGGCTCATACTACGGCGTGCCGCACTCCACGCTCGAGTACAAAGTGAAGGAGCGCCATCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCCGCAAGACGTCAACAAGCCGCAGCCTCCCAAGCCGCCGCCGCCGAAACCGCCGACGAAGCCGTTCTCCAACGGAATGAACGGGCCGGAAGCTCCGGGGTATCCACCTGGGTATCCGTTCTGGCCTGGTAGTGGATTCCCACCGCCGCCTGCTCCAGATTTGTACGCGTCGCACATGATGCGACGACTGCGCGAGGAAGCGCCGCCGCCTGCGAACGGTTCGTTCCTGGAGGGGATTATCCGCTCGAGCCTGGAGCGGCCGGCGCTGCTGCAGCGGCTGGCGGCGCCGGGCgaggcgcggcgcgcggcgccgGAAGAGGAGCCGCCGGCGCGGCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCGCGCTCGGGCACGCCgacgccgccgcccgcgccgcccgccgagccgccgccgccgcccgccgCGCCTCCCGACCGCGCCTAG
- Protein Sequence
- MVPLRRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRAYTEEELLSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTIVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQLQAPIAPITPMLPTGQTSLKAPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPNELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVNKPQPPKPPPPKPPTKPFSNGMNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPGEARRAAPEEEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRSGTPTPPPAPPAEPPPPPAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -