Mimp005599.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mythimna impura
Gene Symbol
JARID2
Assembly
GCA_905147345.1
Location
LR990339.1:4757337-4780219[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-19 1.2e-15 59.4 0.0 9 89 414 491 408 491 0.91

Sequence Information

Coding Sequence
atgtcggtattgaacgacatttgccGTTTCAATTCTGCCTTACGACCAGTGGTGCGGCTGGAACCGCTACGCATCAGCCTCAAGGCTCATGCGCGCACAGCGCATGCACGCAGACGACCAGCGTCACCGCAGCCGGGGACTAAACAACCACGAAAGTCGAAATCACACAACACAAAATTTTCTAACCCACTAAGATTAAGTGAACATTGTATGTACTTGCGGCCGCGAACATCATCTGGACTTGATTCCATATGGAAGCGAAAATACACATATTCTTCATCGAATGAAGAGGACGACGATCTGAAGAATCGCATGAAGCCACCTCGCGTTGCTCCATCTAAGGCGAAATCTCGCAAGAAACTCGCAGTAACTACTATGAAAATTACTGAAGAGATGAAAATAAACCCGGTCTCTTCAAAGATGACCATGACAGCCCGGCATAACACGACAGCGTGTACGGCACAGGATGACCCGACAGTGTTGTCGACGAGGGATGACCCGACAGTGTTGACGACGAGGGATGACCCGATAGAGTGTATGGCGCGGGAGGACTCAACACCACGGACGGTGCGGAATAACTCACCAGTGCGGATGGAGCGAGATGACATGACAGCGCAGACGGCTCGAGATGCCCGAGTATCTCCAGGAGATGACCCGACGTTGCGGGACCACCCTACAGTGCAGAATGACCCGACGGTGCAAGACATCTCTAAGGCTGTGAAAGAGAGAGCTAAATCCAAAGAGTATAAGGCGAAGATACGTCGTTTGAAACGAAAGCTAAAGGAGGCGCAGACGACGAAAGAAACAGATTTCATTCGCTACAGGTGCAAGCTCAAAACGCAACTACTGACTGAAATTAAAGGTGTTCACAATCGGTATACTGAAGTTGATACTATAGCGGCAGCGCTGGACAGAGAACCGGATGTCAAGAGGGTATACCAGTCCCAATCGTCTGAAGATGATGAGGGGCCTGGCACTAGCGCGTCAGCAGCGGTAGGCGGGAGTCTAGTAGACGCGCCGGTTTACTACCCTTCTATAGAAGAatttcaaGATCCCATCGCCTACTATGAAACTTTGTATCCAGATATTGTAAAACATGGTATCTGTAAGATGGTGCCGCCTCCTGGTTGGACACCACCCTCAGAAGTGCACGGCGACGACATTAGGCTCGATGTAATGAACCAATACATTTCGCGCCTGTTCAGACGCTGGGGGCCGGCCGCGAGAGAGTTCAGTGCTATCAAGTTGTGCCTTAAACAACAAAACATTAGTTTTGAGCGACCACCACAAttgaATGGAGTGGAAATTAACTTACCGAAACTATACCACCTCGTGCAACGCCACGGTGGGCTGGAAGCGGTGACAAACAAGAAGCGATGGGACAAGGTCGCACATGATATGAAAATTGCTAAGTCGAATGATTTTGAGAAAAAATTGGAAGCAATCTACATAGAATTTCTCCTGATATACGACATGCTAACATACCATGAGCGCCAGGGGATAATGCGCATTGTGGAAGTAGCGTGGAACAAGAAGTACCAACGGCTCTTGGACCGCGCCCTTTCCCCTTTACACCGACAGAAGCGAATGCTTGGGCTAGTCGACTCTTTGGCCACTTCTGACGATGAGATGGACGACATAGACACCGCAGCTGCTCTCAACCAGGTGGAAGCCTGCGTGATCAAAGGTCAACCTATGACACTTAGTAACTTTAAAAAGGTCGCGTCCATGATGTACGAGAGCATGATCGTCCAGGGCTCGGAGGAGACCGGACCGCCTACGTTGCAGCACATCGAGGAGCAGTACTGGCACCTCGTGACGTCAGGCACCGAGCACACGTGCGTCCACACCGCGGAAATCGACACCAGCGCCGAAGGCTACGGCGTCTCTACAAACAAAGAACCTTATGCGAGCCATCCATTTAACCCCAAGaaaatcatagaaaatcaaaAAAACGTGCTCCGCTATTTGGGCCCGCTGGTGGGTGTCACAGTGCCCGCCCTGCTTCTGGGCATGGCTTTTGCTACAATATGTTGGCATCAGCATTTAGTACCAGAAGTGGTTTACCAACGCTCTGGGCCCGCTAGGATATGGTATGGAATCCCTGCCCACCAGGGTAATAACTTTAGAAAGGCTGTCCAAATTCTGAGCCCGATATCGTGCTCGAATAAGCTCTTGTGGCTATCTTCGGATACCACAATGATCCCACCGAGCGTGTTGCGTGAGCACAACGTGAGCCTGACGCGCGTGACACAGCAAGAGCGCGAGTTCATCCTGGCCGTCCCCAACGCCTACTCCTGCACCGTCAGCACCGGCTACACGGAGTCGGAAAGCGTATTCTTCGCGCCGCCATCCTGGCTCGACTCCTTATGGAGAGTGTTCAAAGAAGCGCGGGCGAGTTGTGAGCCGACGTTGTTTTCAATAGAGCGTTTGCTCTATAACATCGGGTGCGACCAACAGCCCACAGAGGACATTCTGGAGCGAGCACAGCGTCTTTATGAAAGGATGCTGTTTGAAGAAGTTACCAACAGGCAGATGCTCCAGGAGCGAGGCCTGTCCTTCGTGCAGGAGttacTCAGCGAACGAAAAGAAAATGAACCACAATGTCCTCGAGATGAGTGCAGTTACTGCAGGGCCTCGCTGTTCCTGTCCAAGGTAAAGGGGCTGCCCGCCAAGAACTCAGTGCTATGCCTGGAGCACACGCTGACGCTGCTGGACACGGAGCAGTGCAAGAACATGGATGTGAAACAGCTGCAGGTGGTGGTGCACGTCAGTGTGAAGGAACTGCACAGGGTGCACGATAATATGAAGCGCCATCTGAACATCGACTAA
Protein Sequence
MSVLNDICRFNSALRPVVRLEPLRISLKAHARTAHARRRPASPQPGTKQPRKSKSHNTKFSNPLRLSEHCMYLRPRTSSGLDSIWKRKYTYSSSNEEDDDLKNRMKPPRVAPSKAKSRKKLAVTTMKITEEMKINPVSSKMTMTARHNTTACTAQDDPTVLSTRDDPTVLTTRDDPIECMAREDSTPRTVRNNSPVRMERDDMTAQTARDARVSPGDDPTLRDHPTVQNDPTVQDISKAVKERAKSKEYKAKIRRLKRKLKEAQTTKETDFIRYRCKLKTQLLTEIKGVHNRYTEVDTIAAALDREPDVKRVYQSQSSEDDEGPGTSASAAVGGSLVDAPVYYPSIEEFQDPIAYYETLYPDIVKHGICKMVPPPGWTPPSEVHGDDIRLDVMNQYISRLFRRWGPAAREFSAIKLCLKQQNISFERPPQLNGVEINLPKLYHLVQRHGGLEAVTNKKRWDKVAHDMKIAKSNDFEKKLEAIYIEFLLIYDMLTYHERQGIMRIVEVAWNKKYQRLLDRALSPLHRQKRMLGLVDSLATSDDEMDDIDTAAALNQVEACVIKGQPMTLSNFKKVASMMYESMIVQGSEETGPPTLQHIEEQYWHLVTSGTEHTCVHTAEIDTSAEGYGVSTNKEPYASHPFNPKKIIENQKNVLRYLGPLVGVTVPALLLGMAFATICWHQHLVPEVVYQRSGPARIWYGIPAHQGNNFRKAVQILSPISCSNKLLWLSSDTTMIPPSVLREHNVSLTRVTQQEREFILAVPNAYSCTVSTGYTESESVFFAPPSWLDSLWRVFKEARASCEPTLFSIERLLYNIGCDQQPTEDILERAQRLYERMLFEEVTNRQMLQERGLSFVQELLSERKENEPQCPRDECSYCRASLFLSKVKGLPAKNSVLCLEHTLTLLDTEQCKNMDVKQLQVVVHVSVKELHRVHDNMKRHLNID*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-