Mimp052803.1
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- Kdm5
- Assembly
- GCA_905147345.1
- Location
- LR990366.1:20486866-20499281[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-25 4.9e-22 79.9 0.0 2 89 25 108 24 108 0.93 2 2 7 2.8e+04 -2.7 0.0 51 78 199 223 194 225 0.65
Sequence Information
- Coding Sequence
- ATGCCAGATAAGAGCAATCTGCAAGtgcaatataataatgataatattgaTGAGGTAGCGATAACCAGAGTCAAGTTAAACTTCCTGGACCAGATCATGAAGTTTTGGGAGCTGCAGGGCTCCGTACTCAAGATCCCCACGGTAGAAAGGAAACCGCTCGACCTTTATGCTTTACATAAGATTGTTAAGGAAGCAGGTGGCTTCGAAGTATGCTCCTCAGAGCGAAAATGGTCGAAGGTGGCGCGACGCATGGGCTTCCCGCAAGGCAAGGGTATTGGCTCGATCCTCAAGAACCACTACGAGAAGATCTTGTACCGGTACGACGTGTTCAAGAGCAACGGTGCTGTCGATAATAAGGATACTGATATCAAAGTAAAAGGCGAGCAAACGCCAGAAAAAGCCAGCGGCACTCGCAGCCGGTCAACAAGCAAATGTACCGCGGCCGCCACCCCGCCGCCGGCGCGCCGCTTCAAGCCCGACCCGGATGGACCCACTCCCGGCGACACCGTGCCGGACAGAACTTCTGCTCAGATGCAGGAGGATAACATGAAGACCCCAGTGAAAGAGGAGAATCTGGAGACGAGAAGAAGTCCTCGCGAGAACAAGTGGATGTCAGCGGCGGCGTCGTGCGGCGCGCGCTCGCGGGTGACGCGCTCCACGCGGCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACGCCGGCGCCGCCCACCGCGCACGCGCTGCACGTGCTAGACCCGTTGGCGAAGTACATGTGCCACGTTTGCGGTCGCGGAGACGTCGAGGAGCAGATGTTGCTCTGTGACGGCTGCGACGACTCTTACCACACCTTCTGCCTCCTCCCCCCGCTCGCCGACGTGCCCAAGGGAGACTGGCGCTGTCCCGTGTGCTTGGCTGAAGAGGTATCAAAACCTACGGAGGCGTTCGGCTTCGAGCAAGCGACGCGCGAATACACACTACAACAGTTCGGAGAGATGGCGGATCAGTTCAAGTCGGATTACTTCAATATGCCTGTACATATGGTGCCAACATCGACGGTAGAGAAAGAGTTCTGGCGCGTCGTGTCCTCATTAGACGAGGATGTTACCGTCGAGTATGGCGCCGACCTGCATTCTATGGATCATGGCTCCGGTGAGTACATcctaatatcaatttaa
- Protein Sequence
- MPDKSNLQVQYNNDNIDEVAITRVKLNFLDQIMKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSSERKWSKVARRMGFPQGKGIGSILKNHYEKILYRYDVFKSNGAVDNKDTDIKVKGEQTPEKASGTRSRSTSKCTAAATPPPARRFKPDPDGPTPGDTVPDRTSAQMQEDNMKTPVKEENLETRRSPRENKWMSAAASCGARSRVTRSTRLREHRMSNMTVSVTPAPPTAHALHVLDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSLDEDVTVEYGADLHSMDHGSGEYILISI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -