Basic Information

Gene Symbol
nfxl1
Assembly
GCA_963576905.1
Location
OY756429.1:9900482-9920788[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 4.4e+04 -4.3 1.3 14 19 929 934 929 934 0.84
2 17 0.17 3.7e+03 -0.7 0.4 4 10 965 971 964 971 0.96
3 17 7.3e-08 0.0016 19.7 16.6 1 19 979 996 979 996 0.99
4 17 1.2e-07 0.0026 19.0 13.9 1 18 1032 1049 1032 1050 0.94
5 17 2 4.4e+04 -4.8 1.8 6 10 1075 1079 1074 1079 0.89
6 17 4e-08 0.00089 20.5 11.2 1 19 1085 1103 1085 1103 0.99
7 17 8e-05 1.8 10.0 15.9 1 18 1138 1155 1138 1156 0.97
8 17 0.43 9.4e+03 -2.0 0.7 1 10 1165 1174 1165 1174 0.78
9 17 0.00047 10 7.5 15.0 1 18 1190 1207 1190 1208 0.98
10 17 2.3e-09 5e-05 24.5 13.5 1 19 1217 1235 1217 1235 0.97
11 17 0.013 2.9e+02 2.8 7.2 9 19 1283 1293 1274 1293 0.86
12 17 0.21 4.6e+03 -1.0 5.6 3 11 1303 1311 1302 1312 0.90
13 17 1.6 3.6e+04 -3.8 5.8 14 19 1340 1345 1340 1345 0.90
14 17 0.54 1.2e+04 -2.3 9.6 1 12 1381 1392 1371 1394 0.84
15 17 0.0003 6.5 8.1 12.9 3 18 1417 1432 1416 1433 0.95
16 17 2 4.4e+04 -4.7 1.6 8 13 1438 1443 1437 1443 0.76
17 17 1.1e-06 0.024 15.9 10.4 1 18 1478 1497 1478 1498 0.87

Sequence Information

Coding Sequence
ATGCCagaagaaccctttacattTAGCCGCCTAGACAGTAAGCGAGGGGGTGGAGTTGCAGTATATGTAGCCGAGAAGTTCAATAATATACCTGTTAAAGCATGTATCAAACAGCAGAACAATTTTGGATTTACTGAATGTTTGTGGGTGGAAATTACGCTGGCAAATCTTGTTTTTACTGTGGGTGGTGTGTACAGGCCACCAACATCAAACATCAATGACGATAATGcactatacaataatattagatCGTTTACTGATACCACAGAGACTTTGGTGATCTTGGGAGACTTCAACCTTCCAGAAATAGAGTGGCCATTAGGTCACTTACACCGATTTCATTCCTCATCTAGTTTATTCCTGGATATGTACACAGACACAAATCTAAATCAACTAGTGGATCAACCCACCCGATACAGAAATGATCAGACACCTGCCACTCTGGATCTTATTTTGACaaatgaagaaaatttgataaatGAGATACTTTATGAGCCGTGTATTGGTAAGAGTGATCACTTAACGCTGATTGCTTCTCTGCAGGTTTACCTCAAAACATACCAAGGATCTACTAACTATACTCCTAGAAAAAACTATAATTTAACAGACTATGAAACTGTCAACCAGGAAATTGTAACCCACAGACTAAGTTATCAAAAATTTGAGAGTGTTAACGATTCTTGGAACCAGCTTAAGTCTGATATTATGTGTGTCGTAGATAAACATACTCCTCTTGTCAGAAAGGGCGCTAAGATTAACTCTAAAAAACCATGGATAAACCAAGAAACACTCACACTTCACAATAATAAACTGACAGACTTTGTAAGGAACAATAGAAAACGGTTTGAGGAAAATATTGTTAATACTGGGAACAAAGCATTCTACGGGTATGTCGGTGGACAGCTCTCTTCAAATGTGTCTTTGCCACCGATGATCATGGACAGCAAGGGAAACAATATCACCGATCAGAAGACGATCTCCAATATATTTGCAGACGAGTTTGGGAAAGCATTTACTAGGGAACCGGATGGCCCACTGCCACATATAGAGGAGATACCTAGAGTGGGAAATTCCCTGTGTGACATTCACTTCTCAGAAGAAGAGGTAAAGAACACCATTCTAAATCTAAATGACCACACAGCTATGGGTCCCGATAATATACCGGCTATTGTCTTGAAAAGATGTGCAACTTCTCTGTGTCCACTTGTAACACAGTTGATGAGGGACTCCTTTGATAAAGGGTGTCTACCTAAAGACTGGAAAAAAGCCCTAATTACTCCTATTTATAAAAAGGGAAACAGAGTTGACGCAGGAAACTACCGACCCATAAGTCTGACTTGTATACTGTGTAAGTGCATGGAGAAAATAATTGTGAAGCAGCTGCGTAACTTCTTGCTCAGTAATGGTATTGTCGGGCCAGAGCAGCATGGATTTGTGCCTGGGAGGTCGGTTGTGACCAATCTGCTGCTCTGTTTGAACTACTGGTCTTCCAAGTTCGACAGCCAAATACCCACGGATGTTATATATCTGGATTTCCAAAAGGCATTTGATACTGTCCCGATACGACGATTGCTTCTCAAATTAGAACATCTAGGAATTCGAGGCAAACTACACAAATGGATCGAGGGTTTTCTCACTGACAGATATTTCCAGGTGAGGGTTGGGACTGACCTGTCGAACACTAAGCCAGTATTGAGTTCTGTCCCCCAGGGATCAGTTCTCGGACCCGTCctcttcatattatatattgtgGACTTGCCACTGACTCTTAATTCTCCTGTAAAACTGTTTGCGGACGACACAAAATTGTTTGGTGACCCACTAAGAGATCATGTACAGCTGCAGGAGGATCTAAACAGCATATTTGCTTGGACACAGAAATGGATGCTTAAACTGAACATAGACAAGTGCAGTGTTTTACACATCGGCACCAAAAACCCGAGGGTCACATATAGTCTCGATGGAGCCTACTTAAAGCCAGTGAATGAGCAAAAAGACTTGGGCATCACTATCTCTTGCGATCTGAAATGGGAGAAGCATTTGATATCAATTGTTAAAAAGGCCAATAGCTTATCATATCTAATTAGAAAAACCTTCAGCCACTTACCACATGATCTgctgattaaaatatataaaacttatgtGAGACCAGTTTTAGAGTATGGATACCAAGTTTGGAATCCTTACTTTGAGAAAGATGTAAGCATGCTGGAGAGGGTGCAGAGAAGGTTTACCAAACTGGGAAATGGCCTCAGATGCTTAACATATGAGGAACGTCTGAATGTCTTGGGCCTCACTACTCTTGAGGAACGGAGAAAGAGAGGGGATCTCATAGAaaccttcaaaatattaaatgaatacTATGACTGCCCTGAATTGAAGCTGATGTTCTGCCCCAACCAAAACACTAACTTGAGAGGACATAGTTTGAAGCTAGACAAACACAGTTTCAGGCAGAATCCCTGGAAGCATTTCCTGTCCAACAGAGTTGTGGATGCATGGAACGAATCCGTTGTTGGAGGGTACAAAGCTTTGTGTAAGCAAAGTTCCGATTTGGCAAGAACCAAAGATTATTTGGAACTGTCATTCCAATCTGGAGGTCTGGTTTGTCTTATATGTATAGAATCGGTGAAAAGGCAACAGGCGATATGGAATTGTGTCTCTTGTTATtctgcattccatttgaattGTGTTCAAAAATGGGGGAGAGATTCcataaatataaagaaaatgcAAAGCGATCCACATACGATAAGAGTTCATACAACGAATGCAATAGAATGGAACTGTCCGAAATGTCGTCAATCGTATTCAGagGTCAATATCCCTAACAgatatttgtgtttttgtgaAAAAACTATTGATCCGAGCTACCATCCATGGAATCTACCACACTCTTGCGGTGAAGTTTGTAATAAAGAATTGGCTAAAAGTTGTGGTCATCGATGTTTGCTATTATGTCATCcagGTCCTTGCCCACCATGTCCAAAAGTAATACAAAAGGCATGCAATTGTGGCCAAAGTCCTATGAAGCCTATGAGATGTGGCTCCACGAATTGGTGTTGCAGTATGGTTTGCAACAGATTACTTGAATGCAACAGACATAAGTGTCAGCAAAAATGTCATGATGGTTCATGCAAGCCCTGTGACAAATCCAAAGAACAGCGTTGTCTGTGCCAGAATGAATTAAAAGTAATTCCTTGTCTCACCAAACAGTGGCAATGTAAAAAGGTATGTGGCAAGAAGATGTCTTGTGGTTATCATATATGCGAAAAAATATGCCATGCTGGTAACTGTGGTGAATGCCCTTCTACTGGCTTTCAAAAGTGTCCTTGTGGGTCTGTTGCAAAAGAAGTTGTTTGTCCTAATGAAGTGATGACTTGTGGAGGTACATGCAACAAGATATTGCCATGTGGAATACACCAATGCCCCCATAAATGTCACAAGGACAACTGTCCGCAGtgTTTGGTTTTGGTTGATAAACAGTGTCGATGCGGTTTACACACAAAGCAATTGCCATGTAACAAGCAATACACATGTGATACCAAATGCAAAAACATGAAGTTATGCGGTAGACATCcatgtaataaaaaatgttgtgaCAACGACTGTTCACCATGCGACAAAATATGTGGAAAAGTATTGCAGTGCGGAAAACATAAATGTGCATCCACTTGTCATAGAGGGCCCTGTTACCCTTGTACACTTACGGTCAAAGTTACATGTAAATGTGGCCGCACAAGCATTTCTGTACCTTGTGGCAGGCAAAAGAGGACAAGACCACCTAAATGCACATTGAATTGCAGgAATCCTGCACCGTGTGGacacacaaaagaaaatatgcacCGTTGTCACTTTGGTGCATGTCCCACTTGTAAGCAAATGTGTAATAAGACCCTTCCGTGTAATCACGTTTGTAAATACGTTTGTCATAATTATGTGCCCATTTTAATACCAGGCGCAAAAGCTGATACACCGTGTGATCAAAGACAGGATGTTATTGAAGTAAGAGCCTTGCCGTGCCCTCCATGTAAAGAGCCAGTAAAAGTCTCCTGTTTAGGGAATCATGAGGAAGTGTTTTATCCTTGTCACCAGGCTAAAGTCACCACATGTGGGCGACCTTGCGGACTACTGCTTAAATGTCAAAACCATCATTGTTCCTTGAAATGTCATTCTATTCAAGATGGGGATAATTCTTCATGCGAAGCTTGCTCCAGGATGTGTTCTTTACCAAGACTACCAGGATGTAATCATGCCTGCACGGCACCCTGCCATCCAGCCCCTTGTGCACCGTGTGTTCATTATCTGAAGCGTAAATGCCACTGTGGTTTGACTGAATTATATTTAAACTGCAGTGAGTTCAACGCATCAAatgaaattgagaaaataaaaaaaatgtcatgcAAGGAACAATGTAGCCGTTTGTTGAAGTGTGGACATAGATGCAGATCAAAATGTCACCCTGGTGAATGTCCCATCCTAGAAGTGTGCTTAAGAAAAACTAAAGTATTTTGTCCTTGTCGTAGGATCAAGAAAGATATTCAGTGTGATTTGgTAAAAGATACCAATCTTCAGTGCGATGATGtttgcttaaaaaaaattgaagaagaGAAAACTGCAAAGGCGCAAGAAGAGAAGCGACTGAAACTTCAAGAagagcataaaaataaaaaagaactgGAGGAATATGAAAAGAAATTTGCAACAATACCTGTAGGCATTGGAAATAAAGATTACCGAACAAAGGAGAATGGAATTACCGTACAAGCACCCTACAATAAATTCCAAGATGCTTACAGGTATTTCAATGCTGATCTAAATTTACTGAAACATTCTGTGGAAACGTGCATGGAAGGTCAAACACAATGGGGGAAAACTAATTTTGACAAGAGATTAAAAATAATCGACAAAGTAGCTAAATTGGCAGCTGGAAATTTCAAACAACAATTAAATGCCGCAATGATTTGTGGTTCTGCGTATCCACAACAAGAAGCTGAAAATgaaactaattatatgattaatttACTTACAAAACTTTGTTCGGACGCATCGGATATTCATAAGAAGTATAAAGATTTACATGGGAGAAAAGGATTTTGGACATGTATAACTCCATTTAACTCTCCATCGATGACCGTCTTCATGGTTTCAGCAACGCTTATTTTGGGTAATTCAGTCATATGGAAGCCGAATCGAAAGTCGTTACTCACAAATTGGGTAACCTTTGAAATGTTTCGAGAAGCTGGTCTCCCAGATGGAGTTTTGAATTTTGTGCCTTCGGAAAATTCACTCTTTGACAAAGTTGTGTTGAATTCAAAAGACCTGTCTGGTGTTaattttattggaaaaaaacagacatattttaaaattttcgaaGAAATTAAGAGAAATGATAAAGTATACACTTCAAAACCTAGGATTATAGCTGGCTACGaaggaagaaattttatttttattgacgcATTTTCAGATATTCATTTGGCAGTTAGAGATTCAATTATTTCAGCTTTTTCATTTTCAGGACAAAAGTTTTCGTCTTCATCTATATTGTATTGCCCTCAGAGTAGATTTTGTGAGATCAGAGATTTACTTCAAAAGGGGATTGCAAACCTCACTGTCAATCATCCCGTAAGTATAGAAGAAAACACTTTTATGTCCGCAGTGATAGACACTGAAGCTTTTTCATCAATCAAATCTTATATTGATGTTGCTAAAGCTAATCCAGCTCTCACCGAAATACTTGCAGGTGGTAATTATGATGATAAAATTGGTTATTATATTGCACctacattaatattatgtaaaactcCAGATGATCGATTGTTAACTGATATTATTCCTGGTCCTATTCTCTCGATGTTCATTTACGAAGATGCATATATCTACAATTGTATAGATACAATAGCTAGAAACAATACACTATCATTATCAGCATCGATATTTTCTCAAAATGATGAATTTGTCAATATTGCCAAAAAATTGCTCGCTAACACAGTTTACAATGTACAAATTAATCGCCCCACCATTCTAATGGAAGGGGAACAATTTATATGTGAACATCCTAAAACTGAAGGGGctgataaatttttattaaattttagaaaGTAG
Protein Sequence
MPEEPFTFSRLDSKRGGGVAVYVAEKFNNIPVKACIKQQNNFGFTECLWVEITLANLVFTVGGVYRPPTSNINDDNALYNNIRSFTDTTETLVILGDFNLPEIEWPLGHLHRFHSSSSLFLDMYTDTNLNQLVDQPTRYRNDQTPATLDLILTNEENLINEILYEPCIGKSDHLTLIASLQVYLKTYQGSTNYTPRKNYNLTDYETVNQEIVTHRLSYQKFESVNDSWNQLKSDIMCVVDKHTPLVRKGAKINSKKPWINQETLTLHNNKLTDFVRNNRKRFEENIVNTGNKAFYGYVGGQLSSNVSLPPMIMDSKGNNITDQKTISNIFADEFGKAFTREPDGPLPHIEEIPRVGNSLCDIHFSEEEVKNTILNLNDHTAMGPDNIPAIVLKRCATSLCPLVTQLMRDSFDKGCLPKDWKKALITPIYKKGNRVDAGNYRPISLTCILCKCMEKIIVKQLRNFLLSNGIVGPEQHGFVPGRSVVTNLLLCLNYWSSKFDSQIPTDVIYLDFQKAFDTVPIRRLLLKLEHLGIRGKLHKWIEGFLTDRYFQVRVGTDLSNTKPVLSSVPQGSVLGPVLFILYIVDLPLTLNSPVKLFADDTKLFGDPLRDHVQLQEDLNSIFAWTQKWMLKLNIDKCSVLHIGTKNPRVTYSLDGAYLKPVNEQKDLGITISCDLKWEKHLISIVKKANSLSYLIRKTFSHLPHDLLIKIYKTYVRPVLEYGYQVWNPYFEKDVSMLERVQRRFTKLGNGLRCLTYEERLNVLGLTTLEERRKRGDLIETFKILNEYYDCPELKLMFCPNQNTNLRGHSLKLDKHSFRQNPWKHFLSNRVVDAWNESVVGGYKALCKQSSDLARTKDYLELSFQSGGLVCLICIESVKRQQAIWNCVSCYSAFHLNCVQKWGRDSINIKKMQSDPHTIRVHTTNAIEWNCPKCRQSYSEVNIPNRYLCFCEKTIDPSYHPWNLPHSCGEVCNKELAKSCGHRCLLLCHPGPCPPCPKVIQKACNCGQSPMKPMRCGSTNWCCSMVCNRLLECNRHKCQQKCHDGSCKPCDKSKEQRCLCQNELKVIPCLTKQWQCKKVCGKKMSCGYHICEKICHAGNCGECPSTGFQKCPCGSVAKEVVCPNEVMTCGGTCNKILPCGIHQCPHKCHKDNCPQCLVLVDKQCRCGLHTKQLPCNKQYTCDTKCKNMKLCGRHPCNKKCCDNDCSPCDKICGKVLQCGKHKCASTCHRGPCYPCTLTVKVTCKCGRTSISVPCGRQKRTRPPKCTLNCRNPAPCGHTKENMHRCHFGACPTCKQMCNKTLPCNHVCKYVCHNYVPILIPGAKADTPCDQRQDVIEVRALPCPPCKEPVKVSCLGNHEEVFYPCHQAKVTTCGRPCGLLLKCQNHHCSLKCHSIQDGDNSSCEACSRMCSLPRLPGCNHACTAPCHPAPCAPCVHYLKRKCHCGLTELYLNCSEFNASNEIEKIKKMSCKEQCSRLLKCGHRCRSKCHPGECPILEVCLRKTKVFCPCRRIKKDIQCDLVKDTNLQCDDVCLKKIEEEKTAKAQEEKRLKLQEEHKNKKELEEYEKKFATIPVGIGNKDYRTKENGITVQAPYNKFQDAYRYFNADLNLLKHSVETCMEGQTQWGKTNFDKRLKIIDKVAKLAAGNFKQQLNAAMICGSAYPQQEAENETNYMINLLTKLCSDASDIHKKYKDLHGRKGFWTCITPFNSPSMTVFMVSATLILGNSVIWKPNRKSLLTNWVTFEMFREAGLPDGVLNFVPSENSLFDKVVLNSKDLSGVNFIGKKQTYFKIFEEIKRNDKVYTSKPRIIAGYEGRNFIFIDAFSDIHLAVRDSIISAFSFSGQKFSSSSILYCPQSRFCEIRDLLQKGIANLTVNHPVSIEENTFMSAVIDTEAFSSIKSYIDVAKANPALTEILAGGNYDDKIGYYIAPTLILCKTPDDRLLTDIIPGPILSMFIYEDAYIYNCIDTIARNNTLSLSASIFSQNDEFVNIAKKLLANTVYNVQINRPTILMEGEQFICEHPKTEGADKFLLNFRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-