Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756431.1:24131315-24134097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.013 1.4 10.8 2.1 2 23 121 142 120 142 0.95

2 8 2.1e-05 0.0022 19.6 1.9 3 23 148 168 147 168 0.99

3 8 0.00069 0.07 14.9 3.1 1 23 176 199 176 199 0.95

4 8 0.28 29 6.6 0.8 2 23 206 228 205 228 0.93

5 8 0.014 1.4 10.8 6.7 1 23 235 258 235 258 0.96

6 8 0.02 2 10.3 1.3 1 22 264 285 264 287 0.89

7 8 1.1e-06 0.00011 23.7 0.2 2 23 295 316 295 316 0.98

8 8 0.0039 0.39 12.5 2.5 1 23 322 345 322 345 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.013	1.4	10.8	2.1	2	23	121	142	120	142	0.95
2	8	2.1e-05	0.0022	19.6	1.9	3	23	148	168	147	168	0.99
3	8	0.00069	0.07	14.9	3.1	1	23	176	199	176	199	0.95
4	8	0.28	29	6.6	0.8	2	23	206	228	205	228	0.93
5	8	0.014	1.4	10.8	6.7	1	23	235	258	235	258	0.96
6	8	0.02	2	10.3	1.3	1	22	264	285	264	287	0.89
7	8	1.1e-06	0.00011	23.7	0.2	2	23	295	316	295	316	0.98
8	8	0.0039	0.39	12.5	2.5	1	23	322	345	322	345	0.97

Sequence Information

Coding Sequence: ATGGACATTATGCAACATAAAGTTAGAAAGAAAACAAGTGCTAACATCATTGCAACTGACAGCAATAAAGAAAAGGAATATTTCAGGAACTCCAAACACCATAAAGTGAAAAGAAAAACCAATAGTAACATTGTTGTAAATGACAGTACAATAGATGATGAACATTATAGTGACACAGTACAGCATGAGTTTAATTGGAATAACACTGCAAATGACAGCAACTTGAGTGAAGAAGAAGACTTTAGTGACTGCTCTACAAATACTGAAGAAATCTTGGTGGCCACCGGATACTATTCTGAAAATAGAAGAAATCAGCCGAAATATGATGATTCACGCCCTCCATTGAATAAGGGTTCTTTATGCTGTCCAATTTGTAAAGAATCTTTTGTAAACTTTAATCTTACTCGTCAACATTACATCAAACACTTTCCAAAAAGTTTATGTCATATTTGTGGCAAAACTACAACTACTAAAGTGGGATTTGCCACGCACTTGAGAACTCATGAGCAAGAAGCACCAAATAAATATGTTTGTGAGCCATGTAAAAAAGTATTCAAAACGCAATATACTCTAAGAGGACACATTAAATTTTGCCACAATGGTCAAAAAGCAGTGACATGCTACCATTGTCCTCAGCAATTCACTGGATCATTATCGAGGGTGATACATATGTATAAAGTTCACAATGTTCCATGTGAGTTCCATCACTGTGATAAGTGCTCGTCGAAATTTTACACTAAATCTAAACTAAGAAACCATGTGAATCGAGTTCATATAAGAAAACTTGATTTCTTCTGTGATTTATGTGGATGTGGGTTTATAATAAAGAAGGAATTAAGAGAACACATAGTGTTCAAACATGGAGATAAATCTACCCATCCTACATGTGAAATGTGTGGAAGAACTTTTGCATCTCCCAAAGGATTAAAAGAGCACATGAAAATACACTTAAATATCAAAAATTACAAATGCCCCTATTGTGAGAGTGCATTTGTTCAAAAACCATCACTGAATTGCCATTTGAAGAAATATCATAGATCTCAATAA
Protein Sequence: MDIMQHKVRKKTSANIIATDSNKEKEYFRNSKHHKVKRKTNSNIVVNDSTIDDEHYSDTVQHEFNWNNTANDSNLSEEEDFSDCSTNTEEILVATGYYSENRRNQPKYDDSRPPLNKGSLCCPICKESFVNFNLTRQHYIKHFPKSLCHICGKTTTTKVGFATHLRTHEQEAPNKYVCEPCKKVFKTQYTLRGHIKFCHNGQKAVTCYHCPQQFTGSLSRVIHMYKVHNVPCEFHHCDKCSSKFYTKSKLRNHVNRVHIRKLDFFCDLCGCGFIIKKELREHIVFKHGDKSTHPTCEMCGRTFASPKGLKEHMKIHLNIKNYKCPYCESAFVQKPSLNCHLKKYHRSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01025437; iTF_01025460;
90% Identity: iTF_01025437;
80% Identity: -