Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756438.1:18728994-18739781[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.9 8e+02 2.1 1.9 2 23 146 168 145 168 0.87

2 15 0.089 9.1 8.2 1.1 2 23 197 219 196 219 0.93

3 15 7.7 7.8e+02 2.1 2.0 1 21 482 502 482 503 0.94

4 15 0.24 25 6.8 2.2 1 19 582 600 582 605 0.93

5 15 0.7 71 5.4 0.2 2 23 690 712 689 712 0.86

6 15 1.9 1.9e+02 4.1 0.1 1 23 720 743 720 743 0.89

7 15 0.00013 0.013 17.1 1.1 1 23 749 772 749 772 0.94

8 15 7.3e-05 0.0074 17.9 2.0 1 23 779 801 779 801 0.98

9 15 1.8e-05 0.0018 19.9 2.8 1 23 806 828 806 828 0.97

10 15 0.00031 0.031 16.0 4.0 1 23 834 856 834 856 0.98

11 15 0.00035 0.035 15.8 3.3 1 23 862 884 862 884 0.98

12 15 2.1e-07 2.2e-05 25.9 1.3 2 23 891 912 891 912 0.98

13 15 3.1e-05 0.0031 19.1 1.9 3 23 920 941 918 941 0.94

14 15 0.00049 0.049 15.3 0.6 1 23 948 970 948 970 0.97

15 15 0.0084 0.85 11.4 2.3 2 23 977 999 976 1000 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.9	8e+02	2.1	1.9	2	23	146	168	145	168	0.87
2	15	0.089	9.1	8.2	1.1	2	23	197	219	196	219	0.93
3	15	7.7	7.8e+02	2.1	2.0	1	21	482	502	482	503	0.94
4	15	0.24	25	6.8	2.2	1	19	582	600	582	605	0.93
5	15	0.7	71	5.4	0.2	2	23	690	712	689	712	0.86
6	15	1.9	1.9e+02	4.1	0.1	1	23	720	743	720	743	0.89
7	15	0.00013	0.013	17.1	1.1	1	23	749	772	749	772	0.94
8	15	7.3e-05	0.0074	17.9	2.0	1	23	779	801	779	801	0.98
9	15	1.8e-05	0.0018	19.9	2.8	1	23	806	828	806	828	0.97
10	15	0.00031	0.031	16.0	4.0	1	23	834	856	834	856	0.98
11	15	0.00035	0.035	15.8	3.3	1	23	862	884	862	884	0.98
12	15	2.1e-07	2.2e-05	25.9	1.3	2	23	891	912	891	912	0.98
13	15	3.1e-05	0.0031	19.1	1.9	3	23	920	941	918	941	0.94
14	15	0.00049	0.049	15.3	0.6	1	23	948	970	948	970	0.97
15	15	0.0084	0.85	11.4	2.3	2	23	977	999	976	1000	0.94

Sequence Information

Coding Sequence: atGTTGAACGGAGTTCGACCTCTCCAGACAGAGGACTCCAATAATACATCTCTgtcacttttgaaaaaaaaggttgacgATGATAAAATGGAAGAAGTTGCAGAATTTGTATTGACCTCTCGCCCGTTGTTTAGTAAAATATATGAGAAGAAGAAATTATGGAGAAAGACGGACATCATACATGACAAAATACAAACAGAACAAATCAAAACCCATTCTCCAGATGATGGCAGGCATAAGAATGAGGAATCCACTAAACAACCCAATAAATGTGAGACAGAACGCACACTACCACTTTCTAACGACAGCAAATCCAGTAGTACAGAAACATTCACAAATATGTTTATCTCCTATATTCTTCCTCCAATCCAAAGTGAAGATTCTTTGAAAGATGTGTGGCTGGACGCCaagtcaatcaatcaaacagGACCAATCTCATGTAACTTGtgttttgaatgttttcttaacaaaaacaaattgttattgcattatgtacTTAATCACAATAAACCGTTTTGTGGAACTTGTAGatATTTCGTAACAGATAAAGAAGCTTGGGAAAAACATTGGAACTGCCATCTTCCACTCAGATGTTCACACTGTCCTGTGAAGTTCATGGATGAACCAACTCTTCGATCCCATTTTGTAACCTATCACAATTTAGCACATTGCCGCATGTGTAACCTAATGTTGCCAGTCGGCGAATCCTATACAAAACATCTTTACATGAAACATGCTGTCATGATTAATCAGGAGGAGGAAGTAGATGAAGTTTGGTCTGTCAAAGATAAAAGAACTTGGAAATTTTCCTGTTTACTCTGTGGCAAAGATAATTTACCAAGTGTTGACTTTTTGAAACATTTCTTATACCATCACAAATTTGCGTTGAAAAGCTTAACGAATCTTGTGAATGGTAAGAGTTTAGGATTCTCTGTACTTGGTGCCAATATCAATACTTTCACACAAATGGCTGAGCCTGATCCTGCAGAACCAGAAAACAATCAGGCAAATGAGGAAGCTTCTCAAAACGCCACAGATGAACCTGACGTAAGTTTTATCAAGAAGGAAGTTGTCAGCGATGACGAGAGCGTGGATGCTAACGAAAATTTAGACACCTCCAATGTTGATAAGGTTGATGGGAATTCGGATACGCTGATTTCGACAGAACATTTTCTAGATAGATGGGCTGGAAGGGAAGATTTTGATTCCACACTCGTTGAATTTATAAATGTCACAAAAAGTGAATTGGATTACGTGGAAAGGAATGTAGTCAGTGGGTGTTTTGAAAATGGCGGCATTAGTTGCTGGATACAGTATGATTCTGAAAATTCGGATCCGATTAGCATCGCCTGTCCGTTATGCATAGCTGTAATAACATTCACATCACCCCTGAGTTTATCCAACCACGTAACGAAACAGCATGCCTTGAAATGCAATCCGAGTTATGTGTGTCGATATTGTCTGGTGACTTGCCACTCTATACAGGAGTTCATCAAGCACATGGAATACGAGAATGAGTATTTTGAAAACCTTTTTCTGTGTCAATTTTGTAACGAAGAGTTTTCATTACGGGATTCCTCTCGCTTCCATCTCAAACAGCACTTAAATAAATTAGATAAACACGAATGTACAAGTCCACATTTGGGTTTGAAATGCAGATTTTGTCCACGACTATTTTGGGACGAATTGGCGAGGGAGAAACATCACTGCGAAGATCACTACAAAACAAACTCGGAGCACTTTTACAGGTGCTGTTCCTGTGACAAAATCTTTAGTGATAAGATTTGGTGGGCCCATCACGATTTGTACGAGCATAGTAATCTCTCAGACAAAAAATCAGCTTTGACGTGGATAGCCTTTAGATGTCTCGTGTGTTACGACGTTTATCCACAAATTGAAGAACTCAGGGACCATTTTCATGATAAGCATCCGGATTCTAAGAGGTTTTATTGTAACGTGTCCGGTTGTATATCACATCCATTTCGAATACCTCGATACTTGAAAAGACATTACGAGGTGAATCACAAGCCTGGGGTGGTGTCTCACACTAACAACCCATCAAATCTTCGTTGCAACGATTGTGGCAAGCAGATGAGCACAGTTAGAGCGGCAAACACCCACAGGACGGTGGCGCACGGCGATAAGTCGACTTCTAGGTTCAAGTGTAGGATATGTGGCTTGGGACTACCTTCAATGCAAGACAGAAAACTTCACTACCTGGTGGTTCACCCAGACATTCCGGCCTTCACCTGCACTGTTTGTGGAAAAGGATACAACAATAAATCCGCGCTGTATTCCCACCGAACCCAGAGTCATTCTGTGACACTCGTCACCTTCACATGTTCCTATTGTAGTAAAGTTTTtaatAAACGTGATTCATATAAAGAACATCTGTTGATTCACAATGGTCCGCGCCACGTTTGTCCGCACTGTTCACGAGTGTTTGTACAACGCTCCAACATGCTCAGACACGTTCGATTGCACACCGGAGAAAAACCCTATCCCTGTTTGCATTGTGAAAAAACCTTTTCCGACAAAGGCGCTTGTAATTCTCATATGAGGACTCATTCCCGCCAGGACGCGTTCCCTTGTACTTATTGTGGGCAAAGATTCCTGCAGAAGCAAAAGTTGAAATACCACATGAGGAAGCATACAGGAGAAGatCTGGAGACATGCCCTGTCTGCGGAAAGAAATTCACAAACAATACCAACCTTCGAGAGCATTTGAAGACCCATGATGATTCTACTCCGGTCAATTGCCTGCATTGTGGGAAAGTGTTTACATCCAAGCGCTACATGGAGCGCCACATCCGAGACACCCATAGCAACACTGCCGAAGTACATCCGTGTCCAATATGCACCCGGCCTTGTCCAAGACTCGTGGCTCTGAGGAATCATCTGCTCACCCATGCCACAGTCAAGCATCTTTCAtGCCTCATCTGTGGGAAGAGCTATAACGGTAAAAAGAGTATTAATCGTCATTTAACAAAACGTCACCATATTTCGATACACGACGACAACTATCGTGCTAGTTATTACCAACTAGATCCTCGACATTGCGGACTAGGATTGGACGAAGAGACCATTCTGAGAGTCTTTGGACCTGAAAAAGATGTCAAACCGTTGTTTCCAATCCAAATTCCCGTCATGGAGGAAAGGAAaagcaataacaataataagagTAAAAAGAAGGCTATTCAAACAGCTCCCGATTCATCCGCAAGTTCAGACGATGATTACAAACCATCATCAAAGACAAGGAGTGAGCCTAAAAAAGATGAATCAACAAATAACATCAGCGATACAGAGATTCCGGTGTCCGGCTTGGACTTAGCTACCATGAAATCCAGAGCTCGCCGCGGTACCTCTAAAGCTATCAACTACGCTTTAGATTCCGACGACGACATACCAAAAGCGTACAATAAAACTGCAAAGAGAAAACCTAaacagaaatataaaaaaagaattaaggtAAAAGACGTTCTTCCCATCGAGTACGACGGCGAAAATGACACCGAGGAATTTTCTTATGTGAATATCAAACAGGAACCAATAGATTACGATTGA
Protein Sequence: MLNGVRPLQTEDSNNTSLSLLKKKVDDDKMEEVAEFVLTSRPLFSKIYEKKKLWRKTDIIHDKIQTEQIKTHSPDDGRHKNEESTKQPNKCETERTLPLSNDSKSSSTETFTNMFISYILPPIQSEDSLKDVWLDAKSINQTGPISCNLCFECFLNKNKLLLHYVLNHNKPFCGTCRYFVTDKEAWEKHWNCHLPLRCSHCPVKFMDEPTLRSHFVTYHNLAHCRMCNLMLPVGESYTKHLYMKHAVMINQEEEVDEVWSVKDKRTWKFSCLLCGKDNLPSVDFLKHFLYHHKFALKSLTNLVNGKSLGFSVLGANINTFTQMAEPDPAEPENNQANEEASQNATDEPDVSFIKKEVVSDDESVDANENLDTSNVDKVDGNSDTLISTEHFLDRWAGREDFDSTLVEFINVTKSELDYVERNVVSGCFENGGISCWIQYDSENSDPISIACPLCIAVITFTSPLSLSNHVTKQHALKCNPSYVCRYCLVTCHSIQEFIKHMEYENEYFENLFLCQFCNEEFSLRDSSRFHLKQHLNKLDKHECTSPHLGLKCRFCPRLFWDELAREKHHCEDHYKTNSEHFYRCCSCDKIFSDKIWWAHHDLYEHSNLSDKKSALTWIAFRCLVCYDVYPQIEELRDHFHDKHPDSKRFYCNVSGCISHPFRIPRYLKRHYEVNHKPGVVSHTNNPSNLRCNDCGKQMSTVRAANTHRTVAHGDKSTSRFKCRICGLGLPSMQDRKLHYLVVHPDIPAFTCTVCGKGYNNKSALYSHRTQSHSVTLVTFTCSYCSKVFNKRDSYKEHLLIHNGPRHVCPHCSRVFVQRSNMLRHVRLHTGEKPYPCLHCEKTFSDKGACNSHMRTHSRQDAFPCTYCGQRFLQKQKLKYHMRKHTGEDLETCPVCGKKFTNNTNLREHLKTHDDSTPVNCLHCGKVFTSKRYMERHIRDTHSNTAEVHPCPICTRPCPRLVALRNHLLTHATVKHLSCLICGKSYNGKKSINRHLTKRHHISIHDDNYRASYYQLDPRHCGLGLDEETILRVFGPEKDVKPLFPIQIPVMEERKSNNNNKSKKKAIQTAPDSSASSDDDYKPSSKTRSEPKKDESTNNISDTEIPVSGLDLATMKSRARRGTSKAINYALDSDDDIPKAYNKTAKRKPKQKYKKRIKVKDVLPIEYDGENDTEEFSYVNIKQEPIDYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -