Mlon024976.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- -
- Assembly
- GCA_963576905.1
- Location
- OY756430.1:29501566-29516561[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.064 6.4 8.7 1.2 1 23 109 132 109 132 0.97 2 28 0.0024 0.24 13.2 2.1 1 23 141 164 141 164 0.95 3 28 2 2e+02 4.0 0.4 3 23 204 225 203 225 0.97 4 28 4.4e-06 0.00045 21.7 1.9 2 23 234 256 233 256 0.97 5 28 0.00022 0.022 16.4 4.1 1 23 316 339 316 339 0.97 6 28 0.16 17 7.4 0.3 3 23 378 399 377 399 0.96 7 28 3.1 3.2e+02 3.3 0.4 1 23 408 431 408 431 0.94 8 28 0.48 49 5.9 0.4 2 23 462 484 461 484 0.96 9 28 1.9 1.9e+02 4.0 0.1 1 23 493 516 493 516 0.93 10 28 0.79 80 5.2 0.6 2 23 549 571 548 571 0.95 11 28 0.078 7.9 8.4 2.9 1 23 580 603 580 603 0.96 12 28 0.0015 0.15 13.8 1.8 1 23 707 730 707 730 0.97 13 28 0.0051 0.51 12.1 3.7 1 23 799 822 799 822 0.98 14 28 0.0085 0.86 11.4 0.2 1 23 872 895 872 895 0.97 15 28 0.16 16 7.4 1.9 1 23 956 979 956 979 0.97 16 28 6.7 6.7e+02 2.3 0.4 3 21 1001 1019 1000 1022 0.94 17 28 0.44 45 6.0 0.1 1 14 1099 1112 1099 1115 0.94 18 28 0.0026 0.26 13.1 0.5 1 23 1187 1210 1187 1210 0.94 19 28 0.07 7.1 8.5 0.2 2 23 1227 1248 1226 1248 0.94 20 28 4.6e-05 0.0046 18.6 0.6 2 23 1259 1281 1259 1281 0.96 21 28 0.17 17 7.4 0.5 2 23 1296 1318 1296 1318 0.95 22 28 2.9 3e+02 3.4 0.7 1 23 1347 1370 1347 1370 0.92 23 28 0.12 12 7.8 1.1 2 23 1378 1400 1377 1400 0.95 24 28 0.22 22 7.0 5.0 3 23 1413 1433 1411 1433 0.93 25 28 1.4 1.5e+02 4.4 4.3 1 23 1438 1460 1438 1460 0.98 26 28 0.14 15 7.6 1.0 1 23 1466 1490 1466 1490 0.96 27 28 0.022 2.2 10.1 1.0 2 23 1498 1519 1497 1519 0.97 28 28 0.053 5.3 8.9 3.4 2 23 1538 1560 1537 1560 0.97
Sequence Information
- Coding Sequence
- ATGCAAAATCGCgaaaaaatttgttattttgaggaCGATGTCGAAGAAGAACCGGATTATcttctaaatattttacaaGATCCTTTGTTAGATACCGATTTAATTGATCCGGATACTATTAAGAAAGAAATAGAAGATGAAGAGGagtatgaagaagaagaaatcgaTATTCGTCCGACGAGATCATCGAAagttaaaaagaagaaaaagagaaagacTAAAATAATAGAAGAAGAGGATGTTAAGGTAAAGAAGATGTCCAAACGGAAAGAGGTAGAGTTGGAGATTGAGAAAAGTGAAGGAAAACTGTCGGAGACGGGGGACTACGTGTGCAGCAGGTGCCCTTTAATGTTTGTAGAGCCATGTAAGCTCGTCGACCATCTGCACACGGAACACAACGTCAAACTTTCAATTTATAAGCACACTTGCGATTTCTGTGATTTAGATTTTAAATCTATGGCAACACTCAAACGACACATAAAGGATACTCACAATGACAAAAGCGAGGAGTTGCACAATAGGTCTTCAACAACTATGAAATCAGTAACTAAAACTGAATACAAGTTCCTGAAAGAGCATGGGACCAAGAATAAAAAAGGAGTTTGGTTGTGCAACCGGTGCGACGCCGTGTCTGCCAATAAGAAAGTCTTCTACGAGCATTTGAGGAGCAGCCATAAGATTGTTAACCGTGTCACGCAGAGGTGTCCTCTCTGCGAGAAGACCTTCAAGACTTCCTCGTCTTTGAAATACCACATCAAAAGGATGCATAAGACCTCCGTTACACCAGATGAGTATCCCATCGATGCCGATTTGATTAAAGAAAACGGTCGAATGGATCAGGATGGGGCGTGGTGGTGCTCGAAATGTGGCCTGCGATATTTGAAAGAGAACCTGTTTGCGATACACCTGAAGAAATCCCACAAAATAGGCCCGCCCATCGTGATGCACAAGTGTCAGCATTGCAACTACGACTTCACCCAGCCCGGGGTTTTGAAAAGGCATATTAGGAATTCCCATCCGGAGAAATTAGCCGAAAGTTCTGAGGAGTCTAGTTCATCAACGCAAACATTACTGAACGAACTGAGTGAATTGAACAAGTACGGAAAGAAAAACGAACACGGAACGTGGTTGTGTGGACAGTGCAGTGCCATGTACGGCAGGAAGTCCGCCTTCATTAAACACTTGACGAGCTCACACGAGGTGCAGTTGGGGAATGCCAGATACGACTGCGAGTCGTGCGAGGAATATTTTTTGACGAGACGGGCGTTGAACGATCACGTCTCGTCGAAACATAAGAATAAGaAACCGGTCGATGATAAAGAAGTGAAAGAAGACACAGCCAAGTTGATGGAGTACGGTCACATAGAGGAAAACGGCGGCTGGAAGTGTAACGCTTGTCCGTCGGTTTTCGTAAAAAACTATCGCTTCATTTACCACCTGAAGAGAGCTCACGATATCACCATCAAAACCTTCATGTTTGCCTGCGTGCAGTGTAATCTGAGCTTCCTGTCCATTAAGGCGTTGCGAGCTCACAACAACAGCGCACATCCCGATTCAGAGCAATTACCGGATGAACTCGTCAAAGAGCACGAAAACTTGAACAGAATGATAGAGAAAGAAGGGAAAAAGTGCGGCAAGGGATGGCAGTGCAACAGGTGCGGGGCCAAGTACGCCAGAGACACGGTCTTCATGTACCATCTGAAGAGATACCACAATGTAGACCTGGGAGACTTCCAGCATAAGTGTGAGTACTGCCATTTGGATTTCATGGTCGCTAGCGGTCTCAGATATCACGTCTTGAAGAAACATCCGGAGAAATCTTCTGCTTTCTTGAAATCGGTGCCACCTGATGAAGAAAATGAGGGTGGGAGAAAGAGCTCGGAAGATGACGAAGAGGGAAACAGCAGCGAGGAAGAATCTCTAATGACAATAAAGAAGCGTAAAAAGGGCAAGGATAATATGCAGGGTGCGAAGGAACAGGAGATTATGAGGAAGGAAGGAAAGAAGGATTCCGAAGGTTCCTGGTGGTGTGGCAGGTGCGGATCCAGATGCTCCAAAGACGCCGCGTTCCTCTATCATCTGAAACGGACCCATGGGTTGGATATCGGAAGTTTTGTTCACAGATGCGAACATTGCAGCGTTGAATTCATCAGTAAGCCGGCGTTGAGACGGCACGTCAACCGAGTCCATCCGGAGGTGAATCATCTCAGGAATGCATCCGACTTGTTGCAAGCGAGTATCTTAGAAAATCACACCAAGTGCATAGAAGACAATTTCTCCAAAGATTCCGATAACCATTGGGTTTGTAAGATCTGCGGGTCTAAATTCGTCAAGGATACCTCTTGTCTTTATCATCTCAAACGTGATCACTCGATGCACATTGAAGGTTTTGATTACAAGTGTAATCTTTGCGAATTGGACTATAGAGACCCACACTCGCTCAAGATCCACGTTAAAAGGTGTCACACGGTAAATAAAGAAAAGCTGCAcggaaaatatttattaaaagacAATAAATACGTGTGTATAGAAtgcaaaaaaacatttctgaaattaGCCGGATTCATGTATCACTACGCCCGAATTCACGAAGTCAACGATAACATCTTCAAATATCAATGTAAAATCTGTAATTCTAAATTTATATCGCCGAAAGGCGTCCGTCTGCACTTAGTTACGATACACAGCAAGCACACAGATACTTCAGATTACATCGAAATTCTTAAAACGGACGTACAAAAACAGAAATACGAAGgtgaaaaattaaacatttcgattaataaaaaaatcaatgatacATGTGATGAAGGAAGTTCAAAAAAGATTATTGCGGACGATATTGTCAGTTCTATTCAGGATGTAGTGCATCAATGCCGCTCTTGTGGCTATCTCTTATCCAGTCGAAAGAATTTCATGGATCATTTAGAAACTATTCACACTTTGGAATACGAAGCATTGACACTTGTGACGAGCGCTGCCGAATTAGAAGATCAGTCGTTATGTGTCATCTGTAATGTGGTTTTAATGTCCAGCGAAGAGTTTGAGAGACACGTTAAATGTGAACACTCTGCGCAAGAATTATGTGATATTTTGTTAGGATGTAAACACTGCTCTTATTTTACGATGTCGTCATTCTGTTTTAAAATGCATTTAAAAACTGTGCATAGTATACCGAGTGACGAGAACTATTCCCAGTGGCCTTGTATGAAATGTAACTTAGATAATTTTTGTAAAGACGATTTCGTTATTCATGTCTTGAAAAGTGACTGTTATTTACCTGTCGAAGACGGTTGTTATAAGTGTACCGAATGTTTGCTAGTATTTAAGGATAAAAGTATGGCTTCGTTTCATTTCGAAGAATGCCATTTGGGTCTCATTATAAATTCCAGTGATATAGTTTTAAGTAATCGTTTGGACAATTCAGGAATTGAAAATGTAGTGAGTGAAACAAAATTTGTGCAATGTCTGTACTGCGCTAGTACCGTTAAACAATTTGAACTAAAGACACACCTTCTTCAAATTCATTCCATGAACGAAGACGAATTATTAGAATTGAAGTACAATTGCTCGTTTTGTACGAAAGTTTACCCGAAATATTCCCTTCTCACTAGTCACATTGAAGAAGAACATAAAAACTCTAACGAGAATCAGGACTTTATCGAAACGGATGGCGAAATCAAGTGCAAAATTTGCAATCTCAAATTCATGGATAAAGTCACCGTATTAGCTCACGTCAGTGAACACAACAACGTcaagaaacaaaagaataatCCAGTGTGTTCTCTTTGTTCTCAGCAGTTTACAAATAATTCGTCGCTCCGAAGACACATACAAGTCATTCACATCACTAAAAATACCACAACCAACAAAATAAAGAGACCGGCCGTCTGTGATGTTTGTTCCCAAACTTTCATGTCGTATTTAGCTTTACTCAAGCATTTTAGACAAAATCATATAGACGATACGGTAATTAGTGGAAATACATGTTTCGAAATTGTGAAACGTGACAAAACGGATTCAAAACAGAACCTTTCGTCATTTAAATGTAAACTTTGTACATTTATCGTTAAAACGAGAGAACGAATAGAAATTCATCTCATCAATAAGcattggacggggaaaaaacctTTGAATTGTCAACATTGTGATTATAATACCGCGTCACAGTTGGAATTGGAATCCCACACGTACACGCTCCACCCCGATATAAAAGAAGTCAAAGATTCCATCTGTTTGTGCGACGAATGCGGTAAAAGTTTTCACAACAAAATGACCTTTTACTTACATAAGGGATCTCACAAATCTCCGAAATACAACTGCAAGTTCTGCGATTACACGTCTCATTTGAAGACGTCGATGATCACTCATGAGAGAACGCACACCAAGGAAAAACCTTTCAAGTGCAACGCCGAAGGATGCAATTTCTCAAGTTCGACCGCTGTTACGTTAAAGTATCACAAATTTTCGCACGATCCTGAAAAATATATGCAAACTTGCGAAATATGCAATTATAAAACCGTTAACAAATACGTCATGAGATCTCATATGAAAGAACAcaacaatcaaaaaatcattaacgAGAGTGTAAAATCTAGTTCGTGGAACTTGTCCAAATGTAATCTCTGTGATTTTGTTACCAAATATAAACAAACCATGAAGAAACATTTGAACAAACGCCACGGCATCACCGTGTCTAAGGGCGACAATGTGAAATGGTTTTAA
- Protein Sequence
- MQNREKICYFEDDVEEEPDYLLNILQDPLLDTDLIDPDTIKKEIEDEEEYEEEEIDIRPTRSSKVKKKKKRKTKIIEEEDVKVKKMSKRKEVELEIEKSEGKLSETGDYVCSRCPLMFVEPCKLVDHLHTEHNVKLSIYKHTCDFCDLDFKSMATLKRHIKDTHNDKSEELHNRSSTTMKSVTKTEYKFLKEHGTKNKKGVWLCNRCDAVSANKKVFYEHLRSSHKIVNRVTQRCPLCEKTFKTSSSLKYHIKRMHKTSVTPDEYPIDADLIKENGRMDQDGAWWCSKCGLRYLKENLFAIHLKKSHKIGPPIVMHKCQHCNYDFTQPGVLKRHIRNSHPEKLAESSEESSSSTQTLLNELSELNKYGKKNEHGTWLCGQCSAMYGRKSAFIKHLTSSHEVQLGNARYDCESCEEYFLTRRALNDHVSSKHKNKKPVDDKEVKEDTAKLMEYGHIEENGGWKCNACPSVFVKNYRFIYHLKRAHDITIKTFMFACVQCNLSFLSIKALRAHNNSAHPDSEQLPDELVKEHENLNRMIEKEGKKCGKGWQCNRCGAKYARDTVFMYHLKRYHNVDLGDFQHKCEYCHLDFMVASGLRYHVLKKHPEKSSAFLKSVPPDEENEGGRKSSEDDEEGNSSEEESLMTIKKRKKGKDNMQGAKEQEIMRKEGKKDSEGSWWCGRCGSRCSKDAAFLYHLKRTHGLDIGSFVHRCEHCSVEFISKPALRRHVNRVHPEVNHLRNASDLLQASILENHTKCIEDNFSKDSDNHWVCKICGSKFVKDTSCLYHLKRDHSMHIEGFDYKCNLCELDYRDPHSLKIHVKRCHTVNKEKLHGKYLLKDNKYVCIECKKTFLKLAGFMYHYARIHEVNDNIFKYQCKICNSKFISPKGVRLHLVTIHSKHTDTSDYIEILKTDVQKQKYEGEKLNISINKKINDTCDEGSSKKIIADDIVSSIQDVVHQCRSCGYLLSSRKNFMDHLETIHTLEYEALTLVTSAAELEDQSLCVICNVVLMSSEEFERHVKCEHSAQELCDILLGCKHCSYFTMSSFCFKMHLKTVHSIPSDENYSQWPCMKCNLDNFCKDDFVIHVLKSDCYLPVEDGCYKCTECLLVFKDKSMASFHFEECHLGLIINSSDIVLSNRLDNSGIENVVSETKFVQCLYCASTVKQFELKTHLLQIHSMNEDELLELKYNCSFCTKVYPKYSLLTSHIEEEHKNSNENQDFIETDGEIKCKICNLKFMDKVTVLAHVSEHNNVKKQKNNPVCSLCSQQFTNNSSLRRHIQVIHITKNTTTNKIKRPAVCDVCSQTFMSYLALLKHFRQNHIDDTVISGNTCFEIVKRDKTDSKQNLSSFKCKLCTFIVKTRERIEIHLINKHWTGKKPLNCQHCDYNTASQLELESHTYTLHPDIKEVKDSICLCDECGKSFHNKMTFYLHKGSHKSPKYNCKFCDYTSHLKTSMITHERTHTKEKPFKCNAEGCNFSSSTAVTLKYHKFSHDPEKYMQTCEICNYKTVNKYVMRSHMKEHNNQKIINESVKSSSWNLSKCNLCDFVTKYKQTMKKHLNKRHGITVSKGDNVKWF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -