Mlon023811.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- znf711
- Assembly
- GCA_963576905.1
- Location
- OY756430.1:12903692-12913297[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.3e-06 0.00013 23.4 1.6 1 23 200 222 200 222 0.98 2 12 0.12 13 7.8 2.3 1 22 400 421 400 421 0.97 3 12 0.15 15 7.5 0.1 1 23 562 584 562 584 0.97 4 12 0.0012 0.12 14.1 1.0 1 23 593 615 593 615 0.99 5 12 0.00076 0.077 14.7 2.8 1 23 621 644 621 644 0.97 6 12 0.0013 0.13 14.0 2.8 1 23 1076 1099 1076 1099 0.96 7 12 0.014 1.4 10.7 2.3 2 23 1389 1410 1388 1410 0.97 8 12 0.046 4.7 9.1 5.3 1 23 1416 1439 1416 1439 0.97 9 12 0.0074 0.74 11.6 1.0 1 23 1480 1504 1480 1504 0.96 10 12 0.036 3.7 9.4 2.5 1 23 1591 1614 1591 1614 0.94 11 12 0.03 3.1 9.7 0.5 3 23 1675 1695 1673 1695 0.93 12 12 0.0048 0.49 12.2 5.6 1 23 1701 1723 1701 1723 0.98
Sequence Information
- Coding Sequence
- ATGGAACCAGCGAAACCTGAACTCGCGTATCTCGGTGGGCAGTCGAGTAGCATCGATATCAGTTCGATGATCCGTAATCACTTTAGCATCACGCCAATAACCATTAGGAATGAATGTCGAGTGGAATACCACGGCGTTAGGTTGCCTCACCTCGGATCACCTCTCCCCAGACAGTGTCTGTTGGCTGCGACCCGAGTAGCTCGAACGACCTGCCGACGAGTGCACATAGGTGCGAGAAGCGAAGTTTCTTCCTGCTCCAAGGATGCTATCAGATGCCAGCGCCAGCGCTTAGAGGGCAGTGAGCTGATAGGACTCGGGAGGATGCAGGGTATGTCGGGGCTAGCTACTGAACCGGCCAGCTCTCCACCGAGGAATTTACTTTCTGatgtGACGGCGGAGAAGTCAGTTACAGACAGCAGCAAACCAAACAACAAAACCAAAGAAACACCAAAAATTCAAGAAAATGTATCCAAATTAGAAACAAAAAGCGTTACAAAGCACGAATCAGACGCAGCAAGTAGTCCCGTGAGCAACAAAGTGTTGGAAACTCGGCTAACATTTGCGAAACGCAGCCCCTCTAACAATACTGACAACAGATTTCCTTGCAAAATGTGCGACCTCAGCTTCAGTTCCAACGCGGGACTGCACAGACACATGAGGACACACAAATCCAGTCAACACGATTCAGACAGCGAAGACTCCGATGGTGGGGTGCCGAACAGCCCGTCGAGAAGTCGCAGCAGCAAGAGAAAGCTGGAGTATAACAACAACGAGAAGAGCGTGAACGGCTGCGGAGGGAGCAGTGCAGACGATGAGATGGGGCCGCCTACAAGGAAGCGTTCCAAGACCATTAACGACGTTCTGCCGCAATCACAAAACATGGGCTGTCCGGCCTGTGAAAGGAGAGATTTCGATTCGCTCCCATCCTTGGAGGCGCACATAGAAGCGGTGCATCCAGATTATCACGTGAAATTTGCACTGTCTAATTTGAGTTTCAAAAATAATGGCATTCTGAATCTTCACAAAGGAATGGTGCACCGGTCGGATAGAAAACCCTTGTCAAGTAAGAAAATTTCATCAAACTCTATTTTTGGCTTCAAGGACTGCACTTTCATTGACTTTTCTAGTGAAAAATTCCCGCACATTGCGAAAGAAATGTGCGAAAAGAATGTGCATAAAACTGTAACTGAGCAACAGTTCAGATGTGACCACTGTTACAGAGATTTTCCATGTAGAAGTGCTTTGAATATTCATATAAAGACTTGTTTTCCATCCATTTCAGGTGAAGTAAATCATTTTGCGAAAATACGGCGAGATTCCAGTAGTGCGGAGGAAGATGCTCGACGAGATGACTTCTTTGCTAATTTGAACTTACAGAATAAATCACCAGGATACACGCCAGCCATCCGACCTTCTTCGGACTCTGCACAACTTATTGCCAGGGATTGCTTTCCTTTGGGGAAGGATGCTCTGCGGCCATTCATTGATACCACCAAAGACCTCGCTGATATTCATTCGATATTGTCAGTAGCTTCATCAGGAGGTATTTTTGAACAGTTGAATCAAAAGTCTAGAGAAATATCTCGAGGACATGAGCAAATGACCCCAAAACTAAACGAGGAGAGTGAAGAAGCTCAGGATGCCTTTGCTGTAGAGTTCAGGAAAATGAAACTAAGGGGTGAATTTCCATGCAGACTGTGTACAGCGATATTTCCAAATTTAAGAGCTCTGAAAGGACACAACAGGGTTCATCTAAGCGGTAATGGGCCCGGGCCGTACAAGTGCAACATGTGTCCACATTCCTCTTTGGACAAGGCCGCACTAGTGCGACACATGAGGACCCACAACGGCGATCGCCCTTATGAATGTTCTGTTTGTAATTATGCCTTCACTACTAAGGCGAATTGCGAGAGGCATTTGAGAAACCGTCATTCTAAAGTAACCCGAGAAGAAGTCAAGCGCTCAATTATTTACCACCCATCAGAGGATCCTAACAACGACGAAGTCAACTCCAAactaaatatttgtaaagatgACATCAAGAGATCCTCACTCATGTACACTTCACCCGATAATGACCGCCACGAAGAGCGAAGTGAGCGCCATACACCTGTTACACATTTCATTAGAGAATCCCTTCCAACGTTCAACGATCACAAAATACCTTTACCTCTGCCTCTGCAAAGAGATTTATCTCTCGTCATTCCGCAACCTCGGATAGTTCAAACACAGCGTACTTTAGAAAATGTACATCCAAAATTACCCATCACACCCGAAGAGTTAATTCAAGCGCGTCTCCAGCAAGGGAAAACTTTCGGTCAGTTGACCCAGATTCCCGAATTCAATGAGTCTGATGGGGAGAGGGATAATGAAACTGATAATGAGGAAAGTCTACCGCCTGCAGAAACATACACAAAACCTCTGAATTATGTTGGCGAAAGTCCCATGGATCTCAGCACTGGAGAGTTTCAAGACGACGCTCTAGATTTGAGTAAGAAGAAAGGCAGTCCTGAAAATGCGCCTGCACCTCCCAGCCCAGTAATCGAAAATGAGACATTCAGTGCAAAATCACCTGAGTTCAACAACAATCAAGCCGCCGCGGCTACAATGTTTGAAAAAACTCAACAGCTTCTCATGGCCCAGCAGCAACTTCTGAAAGGGGTGCAGCTTCAAAAAATGGATCCTGCAGCAAACTTTTACGCAAATCTTTATAGAGCTGGTGCAGCATTCCAAGGATTGGGTATTCCACCAGGATTTCCATTACACCCCTACCTTTTACAACCCCATTTATTTCTTGGACCCACTTCCAATGCCAAAGAATTGgctgaaataaaagaaaaaatccaAAAAGATATAATCATGAGATTTCAAATGTCTGGAGGTAGTTTGGTGGGAATGGATCACAATACAATTGTGAACAATTTAAGTCTTGATTCTGATAGAGTGCAAGCTATTCATCAACAAGCTTTGAATAATGTGGCTAACAATGATTCAAAGTCATCCACACCAGTGCCTGTGATCAAATCTGAGGATGATAGTAAACCAGTTTTGCCAATCAGTTTAGAGAGTCAAACTTCCTCTGCAGCTTTTCACAATTCATTGCCATcaccaaaaatatcaaaaaaagaCCCCCCAAATAACAGCCCTAATTCGGTAAAAATGGTCATTAAGAACGGTGTGCTCAtgccaaaacaaaaacaacggAGATATCGCACTGAGCGACCATTTTCGTGTGAACACTGCTCCGCTAGATTCACATTGAGATCAAACATGGAAAGGCATATCAAGCAGCAACATCCCCAGTACTGGTCACAGCGCCAGAGGTCCAACATAGGCATTCCTCGTAAAAGTCCAATATCAATGGTTCCACAAAATGTCACTGTGCCATCACTCAGTTATGAAAACCGTTTAAACTACTTGAAAAATCTGAATGATGGATctaatgaagaagaaaaatgcaGCATGATATCTGACCAAGTCAGGTATGCAATACTAGCTCAAAAATTGAAGACTCAAAGTTCTTTTGCTCAAGACAAACCAAACACCTCTCTTTCTATTGATAATGATGAGGAAGATGAAGATGATGCCCTGGTCATTgatgaagaagaggaagacGAAGATGTTGAAGAAGTCAGACCAAAGTCTCCTCAACAGGAAgacaaagatgaaaataattcattagCTAAAAAAGTGGCTGAACAGATACTAATTGGAGTAGCTACAAAAACTCAAAGTGATATTAACAAAGACTTTGATTGGAAAATCACTGGcaatttaatttctaaaaatccATCTACCTCAATCATACCTAAATTTGTTAGTGAGATTGCACAAAACGAAAAAACTGAGAAAACTGGAGAAACTAAGCAAGAAGAAGGAGATTTGGTGTCTGTGTCACGCTTACTAAACAATGCTGCCAACCAGATCCCCTTTGGAAATTTTTTCAAGAACGAGTATTTGCCAAATCAGAGACCGAACTGTGACATTGCTTCTTCTCAGCAAGGAGATGGGTctgaagaagatgaagaaggcTTAGTGGCTTCCTCTGGTTCCACTAGTGAAGGGAATAACTCTGGGAGCGATGAGAACCGGTCTGAATCAGAAAACACCACTCAGGCACCTCAGAAAAAGAAGTCTGCATACAGCCTAGCTCCGAACCGTGTATCGTGTCAATATTGTCACCGCAAATTCCCATGGTTCTCTTCACTCAGAAGACATGTTTTGACTCACACCGGCCAGAAGCCATTCAAATGTCCGCATTGTCCACTTTTATTCACTACAAAATCTAATTGTGACAGACATTTGTTGAGAAAACACGGCAGCCACTCACTGCCCTCTCAACAAAATACAAGTCATGCCATTGAAACGTCCCCCACTAACACTTCCATTGCTGGTCTTGCAAACCAAGGGTTGATGCGAAATGTTCCAGAGAGACCTTACAAATGTGCTAACTGCCCAAGCAGTACATTCTCTACTCTTGGCAATCTGAAAAAGCACATGTCTTCTAAACATGGAATCATAATACCAGATTCTAGTCCTGATAGCCCTAAACATGAAGATGGACCACAACGGCCTGAAAGTGCTGATCACAATTTACATAGTGGGTCAGACGATGAAAAATCCAGCTGTAACAATGATTCTGAGAAAAGGGAAACTGTGAGAAATGAGAGTTGCGAAGATAAAAATGATTGGGATAGTCAGATATCCTCAAAATACAGTCCGTCTTTCTCCCAAGACACCCCATCCAATATGCAGAACACAGATTTGCCATTTAAGTGTCATCTGTGTGATCATTCTTTCTCGGAGAGGCAAGAAGCTCTAGATCATATCAAAGATCTTCACGCATCCGAATATGAACTACTCATGTCTAAAGGAGCTCTGGAGACAAGCGTTGGATTTGCAGATGAGCTAGGATCATCAACACCAGGGCACAAGAGTGAAGGAGGAGAGGATCAAGGACTAGATGACAGTGGAGAACAACAAAGAGGAAAGTTCCCACACTACATCAATAGAAAGGTGATGTGCGCATTCTGTATGCGAAGATTCTGGTCTGCTGAAGATCTGAGGCGTCACATGCGCACACATAGTGGGGAAAGACCATTTGAATGTGAATACTGCAGAAGGAGATTTACTCTCAAACATTCTATGCTCAGACATCTCAAAAAGCACAGACACGCATCAAGTGGCGAAGAGATGGACTTGTCAACTGCTAGTGGTGATGAGGAGAACACTTCAACAATGTCTCAAAACTACTCAAGCTCGTCAGGCGTGTCCGGTTCACCCATCAACTCCTCGTATCAAGCCATAGCCAATAGTTCCACACCAATTTCTTCCAAGAATCCGTTACTCACTCTCAGCGGATATCAGATGGCCATCCATAAAAACTTGTCTCCAGATATtccaaacaatataaataataacaattcaCCTCCCGCTCAAAACTACGAAGGCAAAATGAAAGTGAAAAACGTCAACATGGAAAAGTATAAGAGAAACAGGTATTCTTCAGATGACAACGATATTCAAGATTCTGAAATGGAATCGGGTAACGACCTCATTGGGAATCTGCTGGGGATCAGTGATGAAGGTATGATCAATAAGTTGTTCTCATCACCCGACGAGGCGGCCAAACTTCTCGGAGTTAATAAGTGA
- Protein Sequence
- MEPAKPELAYLGGQSSSIDISSMIRNHFSITPITIRNECRVEYHGVRLPHLGSPLPRQCLLAATRVARTTCRRVHIGARSEVSSCSKDAIRCQRQRLEGSELIGLGRMQGMSGLATEPASSPPRNLLSDVTAEKSVTDSSKPNNKTKETPKIQENVSKLETKSVTKHESDAASSPVSNKVLETRLTFAKRSPSNNTDNRFPCKMCDLSFSSNAGLHRHMRTHKSSQHDSDSEDSDGGVPNSPSRSRSSKRKLEYNNNEKSVNGCGGSSADDEMGPPTRKRSKTINDVLPQSQNMGCPACERRDFDSLPSLEAHIEAVHPDYHVKFALSNLSFKNNGILNLHKGMVHRSDRKPLSSKKISSNSIFGFKDCTFIDFSSEKFPHIAKEMCEKNVHKTVTEQQFRCDHCYRDFPCRSALNIHIKTCFPSISGEVNHFAKIRRDSSSAEEDARRDDFFANLNLQNKSPGYTPAIRPSSDSAQLIARDCFPLGKDALRPFIDTTKDLADIHSILSVASSGGIFEQLNQKSREISRGHEQMTPKLNEESEEAQDAFAVEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRVHLSGNGPGPYKCNMCPHSSLDKAALVRHMRTHNGDRPYECSVCNYAFTTKANCERHLRNRHSKVTREEVKRSIIYHPSEDPNNDEVNSKLNICKDDIKRSSLMYTSPDNDRHEERSERHTPVTHFIRESLPTFNDHKIPLPLPLQRDLSLVIPQPRIVQTQRTLENVHPKLPITPEELIQARLQQGKTFGQLTQIPEFNESDGERDNETDNEESLPPAETYTKPLNYVGESPMDLSTGEFQDDALDLSKKKGSPENAPAPPSPVIENETFSAKSPEFNNNQAAAATMFEKTQQLLMAQQQLLKGVQLQKMDPAANFYANLYRAGAAFQGLGIPPGFPLHPYLLQPHLFLGPTSNAKELAEIKEKIQKDIIMRFQMSGGSLVGMDHNTIVNNLSLDSDRVQAIHQQALNNVANNDSKSSTPVPVIKSEDDSKPVLPISLESQTSSAAFHNSLPSPKISKKDPPNNSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSNIGIPRKSPISMVPQNVTVPSLSYENRLNYLKNLNDGSNEEEKCSMISDQVRYAILAQKLKTQSSFAQDKPNTSLSIDNDEEDEDDALVIDEEEEDEDVEEVRPKSPQQEDKDENNSLAKKVAEQILIGVATKTQSDINKDFDWKITGNLISKNPSTSIIPKFVSEIAQNEKTEKTGETKQEEGDLVSVSRLLNNAANQIPFGNFFKNEYLPNQRPNCDIASSQQGDGSEEDEEGLVASSGSTSEGNNSGSDENRSESENTTQAPQKKKSAYSLAPNRVSCQYCHRKFPWFSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGSHSLPSQQNTSHAIETSPTNTSIAGLANQGLMRNVPERPYKCANCPSSTFSTLGNLKKHMSSKHGIIIPDSSPDSPKHEDGPQRPESADHNLHSGSDDEKSSCNNDSEKRETVRNESCEDKNDWDSQISSKYSPSFSQDTPSNMQNTDLPFKCHLCDHSFSERQEALDHIKDLHASEYELLMSKGALETSVGFADELGSSTPGHKSEGGEDQGLDDSGEQQRGKFPHYINRKVMCAFCMRRFWSAEDLRRHMRTHSGERPFECEYCRRRFTLKHSMLRHLKKHRHASSGEEMDLSTASGDEENTSTMSQNYSSSSGVSGSPINSSYQAIANSSTPISSKNPLLTLSGYQMAIHKNLSPDIPNNINNNNSPPAQNYEGKMKVKNVNMEKYKRNRYSSDDNDIQDSEMESGNDLIGNLLGISDEGMINKLFSSPDEAAKLLGVNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -