Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756430.1:16841498-16843231[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00039 0.04 15.6 1.3 2 23 185 206 184 206 0.98

2 12 0.00086 0.087 14.6 1.1 1 23 212 234 212 234 0.97

3 12 0.00019 0.019 16.6 1.5 1 23 240 262 240 262 0.97

4 12 0.00021 0.021 16.5 8.3 1 23 268 290 268 290 0.97

5 12 0.00068 0.069 14.9 0.2 1 23 296 318 296 318 0.99

6 12 0.001 0.1 14.3 3.2 1 23 324 346 324 346 0.97

7 12 0.00017 0.017 16.8 8.7 1 23 352 374 352 374 0.97

8 12 0.42 43 6.1 0.0 2 21 395 414 394 415 0.90

9 12 0.23 23 6.9 3.8 1 23 422 444 422 444 0.97

10 12 0.02 2 10.3 0.4 1 23 449 471 449 471 0.97

11 12 2 2e+02 3.9 2.7 1 23 477 499 477 499 0.92

12 12 0.00079 0.08 14.7 0.5 1 23 505 527 505 527 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00039	0.04	15.6	1.3	2	23	185	206	184	206	0.98
2	12	0.00086	0.087	14.6	1.1	1	23	212	234	212	234	0.97
3	12	0.00019	0.019	16.6	1.5	1	23	240	262	240	262	0.97
4	12	0.00021	0.021	16.5	8.3	1	23	268	290	268	290	0.97
5	12	0.00068	0.069	14.9	0.2	1	23	296	318	296	318	0.99
6	12	0.001	0.1	14.3	3.2	1	23	324	346	324	346	0.97
7	12	0.00017	0.017	16.8	8.7	1	23	352	374	352	374	0.97
8	12	0.42	43	6.1	0.0	2	21	395	414	394	415	0.90
9	12	0.23	23	6.9	3.8	1	23	422	444	422	444	0.97
10	12	0.02	2	10.3	0.4	1	23	449	471	449	471	0.97
11	12	2	2e+02	3.9	2.7	1	23	477	499	477	499	0.92
12	12	0.00079	0.08	14.7	0.5	1	23	505	527	505	527	0.98

Sequence Information

Coding Sequence: ATGGcagaaataattaacaatttcaATCCTGTCATGCAAACACTGAGTGGGTTGAGCATATATCCCACTAATTCCAGTGAACATTTCAACTCCATTAAAGGCAATGGAAATGGTAAAAGATTTGGTTTGGATCCACCAAAAATGGATATTACAATCATTGATAAGTCTCAAGAAATGGACCCATCCAACAGATCTCATTTGAGAGTGAAATCCCAGTGTCGCTCAATACAAGAATTTTTAAATGCCAATTTAAATAAACAGAGATTAAACAAGAGAATTCATGATGATCCATCCGATGACGAATGGACAACCAATATTTTCAACGGAGAGTTGACCATCACAGAAGTGTTTGGCAATAAGATTATAGTGGACGGACATGCCAGTGGCAACATTGAAAGCTTTTATAACAGATTCAACTCACTATTAGAAACATGCAGCAATAGAAACAATGGCAATATAGACGGACGAAGTGAAGAGTATGTGGGCAATTATCTGGACATGTGTGAGGTTGTGTACGAAGCGGAAGGTGGAGAAAACGGTGAGGCCATAACCCAATGCAGTGTGTGTGATTATAAAAGCAAGTATCCTAGTAAAGTTAAAGTCCATATGAGAAAACACACAGGAGAAAAACCCTTTGCATGTGATCTATGCGACTACAGGAGCAGCAAATCTTACAGCGTCAAAGCACACCGCAGAACGCACACAGGTGAGCGGCCTTATGCCTGCCCAGAATGCTCCTTTGCGTGTAACGATCCTAGCACGCTAAGAAGACATAAGTATACACATTCTGGTGTCAAGCCTTTTGCGTGTCCTCATTGCCAGTATAAATGCACCAGATCTACTCATCTCAAGAGACATCTGCTAACACATCAGACAGATGGGCAGTACACGTGTAATATATGCAACTATCAAAGTGACGCCAAGGCTTCCCTCAAGATTCACATGATGGTGCACGCTGGGAAAGCCATCCATACCTGCAAGGAATGTTTTTTCACGACAGAAGACAGAAGCTCTCTTAAACGACACTTACTTATCCATAGTGGGGAAAAACCACATTCGTGTAATCTTTGCGATTATAGATGCAGAAGAAGCGCTCACCTTCGGCGCCATATGAAATCTCATGAGAGAAAAGATAAACCTAAAGATATTATAGCCAAATTAGAACAAGAGATAAAACCGTTGATCTGTCCGGAATGCGGTTGGGCGGGAACTGATGAAAAAAGTGTTGATACACATATATGCAAAACTGAAGGTCAGGAATTCTTCCATTGTAACCGCTGCGACTTTTTCTCAAAGAGTTTAGCGTCTTTAAAAATCCACAAAACAATGCATTCGGGCAAAATTTATCCTTGCGCACTCTGCTCTAGAAAGTTCCAAAGCATCCAAACTCTCAACGAACACATCACTCAGCATTCTAGGAAAAAGAAACACAGCTGTATAGAGTGTAACTATTCCACCGATTTCTCTTCATCGATACGTAAACATAGATTGAATCATACGGGTGATTTTCCATACAAGTGTGATCAGTGCTCATATACTGCCAAGAGAGAACCAAATCTCGAGAGGCATAAAGAAATTCATAAAAGTGACTCGTTGTTTTTGTCCGTTGCTAAGAAAGAAGAACCAGAGAGCTGTGATGATGCCGAGGATACGTTCAATTGCAACGGCAGTTTTCCTGTGAACGGAGATCTCTCCATACTTTTGACTCCAAATAATAGTGCCAAAGttaattaa
Protein Sequence: MAEIINNFNPVMQTLSGLSIYPTNSSEHFNSIKGNGNGKRFGLDPPKMDITIIDKSQEMDPSNRSHLRVKSQCRSIQEFLNANLNKQRLNKRIHDDPSDDEWTTNIFNGELTITEVFGNKIIVDGHASGNIESFYNRFNSLLETCSNRNNGNIDGRSEEYVGNYLDMCEVVYEAEGGENGEAITQCSVCDYKSKYPSKVKVHMRKHTGEKPFACDLCDYRSSKSYSVKAHRRTHTGERPYACPECSFACNDPSTLRRHKYTHSGVKPFACPHCQYKCTRSTHLKRHLLTHQTDGQYTCNICNYQSDAKASLKIHMMVHAGKAIHTCKECFFTTEDRSSLKRHLLIHSGEKPHSCNLCDYRCRRSAHLRRHMKSHERKDKPKDIIAKLEQEIKPLICPECGWAGTDEKSVDTHICKTEGQEFFHCNRCDFFSKSLASLKIHKTMHSGKIYPCALCSRKFQSIQTLNEHITQHSRKKKHSCIECNYSTDFSSSIRKHRLNHTGDFPYKCDQCSYTAKREPNLERHKEIHKSDSLFLSVAKKEEPESCDDAEDTFNCNGSFPVNGDLSILLTPNNSAKVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -