Basic Information

Insect: Mystacides longicornis
Gene Symbol: AR_1
Assembly: GCA_963576905.1
Location: OY756423.1:13707802-13721489[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.1e-05 0.0011 20.6 1.1 1 23 282 304 282 304 0.98

2 8 9.4e-05 0.0096 17.6 0.5 1 23 368 390 368 390 0.97

3 8 0.00022 0.022 16.4 2.8 1 23 406 428 406 428 0.98

4 8 1.7e-06 0.00017 23.1 2.9 1 23 434 456 434 456 0.98

5 8 0.004 0.41 12.4 6.4 1 23 462 484 462 484 0.98

6 8 3.8e-06 0.00038 22.0 0.4 1 23 490 512 490 512 0.97

7 8 7.1e-05 0.0072 18.0 0.2 1 23 516 538 516 538 0.98

8 8 9.7e-05 0.0098 17.5 0.1 1 23 546 568 546 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.1e-05	0.0011	20.6	1.1	1	23	282	304	282	304	0.98
2	8	9.4e-05	0.0096	17.6	0.5	1	23	368	390	368	390	0.97
3	8	0.00022	0.022	16.4	2.8	1	23	406	428	406	428	0.98
4	8	1.7e-06	0.00017	23.1	2.9	1	23	434	456	434	456	0.98
5	8	0.004	0.41	12.4	6.4	1	23	462	484	462	484	0.98
6	8	3.8e-06	0.00038	22.0	0.4	1	23	490	512	490	512	0.97
7	8	7.1e-05	0.0072	18.0	0.2	1	23	516	538	516	538	0.98
8	8	9.7e-05	0.0098	17.5	0.1	1	23	546	568	546	568	0.98

Sequence Information

Coding Sequence: ATGACATCTAACATGGAAACTATGTCAGAACTTCTAGACACTGAGGATAGTAAACAGATAATAACAGATGATAATAATGCCATTTTTCTCATGTCTAATTTGGAATCTGGTCACGTTATATGCGAAGATCAAGTAGAAATAGACTCTGGCGAACTCAAAGAAAATGTTGGTTCTGTGGCAATATACAGCTGTAGTAGTTGCGGAGTCAAGTTTTTATCTGTTTTGGAACACATTCAGCAGTTCCACAGTGATCAAGAAGTAGTAATTGAgATGGAAGAAGATGCTGCGTTGGATAGCAATCCCATAGAAGAGGTCACGCTGTTACAAGTGTTCGAAGGGACTGAAGCCGAAACACAAGCGTTGGTGGAGGAAAGCCAGGTGGTAGAAAACGAAGCTACGATGTTGGAGAGTACTATTGATGAATCAAAATCCAATTACGAACCCGCGATGGTtgcggatagtaaaaaaaatagcagtACTTCCAAAAATTGGAAAACTCTTTGTGAGCAGCAGTGTGTGGACAGTGATGGCCGGGTATACACTAGGAAGGTTGTCCAAATTGAGAGGTTTTGGGAACCCAAAGgagaagaaattaaaaaagAATGTGTCAACGGCGAAGTTGAAGAACTCCAGGCACACATAGAAAGTGTCGACAGCGAAGTTGAAGAGCGCCAGGCACACATGGAGGAGGAAGTTCAGTTGCAAGAGAATGGCACAGAGCCCGTCATATCCAGAGTGTACCACTGCGTGAGATGCTCCGCCCAATACAACTCATTTGAAGAGTTTGACATACACTCCTGTGCTTCAGCTTCAGAAGCTGTCAAAGATAATCAGAACGGGACTTTCAAATGCGATGTCTGCGACACGTCTTTCCCCACCAATAAATCTTTGCGCTTACATTCACGCATGCACGATCCTATCAAACAGCGACCCATTGAAGCCCCGGTGGAATATAAGTCATCCTCTAAGAGAGTTGTCAAAGATGAGCTGCTGGATCCTGGCAGTAAAGTGGACAAATTTCATTGCCAGCTGTGTAATAAATGGATGCACGTGGGCTACAAGAAAGTTCACGAGATGACCTTCCACGCTGGGCTGGAACAATACAACTGTGAAATATGTAACAGGAAATTCTTTACGGAAGAGAATCTGGAAATGCACTTGACTGTACATAATAGCGAAAAGGTTGTTGTAAATAAAACCGATCGTCCACTACCCTATGaatgtaattattgtaataGACAATTTTCTAGACCACATGAGAAAGTCAAACATGAGAGGATCCACACTGGCGAAAGACCTCATGTTTGTGAGATATGTGGTAAAGCTTTCAGAGTGTCTTACTGTCTCACATTGCACATGCGTACACACACGGGGGCTAGACCGTACGAATGCTCACATTGTGGCAAAAGattcaAAGCTCATAGTGTTTATAATCATCATGTCTTGACACACTCCAATATAAGGGCCTACAAATGCCCGTATTGTCCGAAATCATTCAAGACGTCCGTGCAATTAGCTGGTCATAAAAATGCACATACTAAACCATTTTCTTGTACAGAATGTAACAGgcCGTTTGCGTCTCTCTATGCAGTTCGGGTTCATATGGAAACACATAAAAGGCGGaataatttaaagtttaattgtGAAATGTGTGGAGCTAGCTACGCCAGAGCTTTTGCATTGAAAGATCATAtaaaaagccatatgaatgttCAAGTCGAAGAATctaaagaattttatattcCCGAAGTGGCAGCTGCAACGCTAGCTATTATCCCTAAAGACGAACATGAGAAGTTTGAAAAGATAAATGAGAGTGAATTTGATTTTCCCAACACAATATGGGTAGTCCGCCCTACCTGGGAGGTTGCCTTAAAGAGTTCTGCAATGGCCCCGGTGGTGTTTTTTGGTGTTATAGTAAATTTGATTCTTTTACTACTGTTGGCTAAATGTAAATGGCTCCATACTTCCACTAATCTTTTGATTGGTAATATGGCATTGGCAGATTTATGTACATTAGTCATGTGTCCCTGGATGCTTCTAGTCAACCACTTTTATCAAAATTACGAATTGGGCCATTTTGGATGCAAAATGGAAGGATTCATTacaggAGCCTTACTGATTACAAGTGTGATGAACATTGTGGCGATATCGTATGATCGTTTAACAGCAATCGTACTACCTCAAGAAGCTAGACTGTCTCTTAGAGCAGTAGTGTGCATTGCTATTGGCACGTGGTTCATTGGTTTTATATTTGCTATGCCATTGTCAATATGGAGATATTATAGGGAACGACAGTGGTTGAATTTCTTGGAGAAATATTGTACTGAAAATATTCAGATCCTTCCAACGTACTGGCATGTCCTTATATTTATTCTAGTTTGGATACCATTGGTGGTTCTCACCGTTTGCTATTCTGCCATATTTTACAGACTTGACAAATATGAGCAAAAAATCCTAAGACGGGAACATCCCATCAGTGTGAGGTATAAGACAAGAGTTGCCAGAACAATATTTGCTGTGTTGATAACATTTGTGATATGCCGTACACCCTTCACATCTCTGATATTTTGGAGGAGTAAGATTTTGAAAGAAGAAAGAGTCAATGCTatCGGTACAAGTTTTCACATTCTCTGGTTCATATCTCATTTTCTTATGTATTTGAATTGCGCCATCAATCCACTGATATACGGATTGACCAATGATAATTATAGGAAAGCTTTTGTTTCATCTTCATTTTGCAAATGGATTACGGGGAAAAGTGACAatAAAGAGAAATTTGCtaattttgaaaagaaagaaaaaagatcACCTGCTGTAAAATCAGATAATAGAAAGGAGCAAAACTCATTCAAATATCGCAAGTTTTGGACCAGAGGTGGTAAAATGGTATTCAGTGATAAAACAAGCAAAAGTTCTGACAAGAAAACTCCAGACTCTCCTGTGGTCTCCAGTAAAATCACTCCTATCCCGGATGATTTCATTTGA
Protein Sequence: MTSNMETMSELLDTEDSKQIITDDNNAIFLMSNLESGHVICEDQVEIDSGELKENVGSVAIYSCSSCGVKFLSVLEHIQQFHSDQEVVIEMEEDAALDSNPIEEVTLLQVFEGTEAETQALVEESQVVENEATMLESTIDESKSNYEPAMVADSKKNSSTSKNWKTLCEQQCVDSDGRVYTRKVVQIERFWEPKGEEIKKECVNGEVEELQAHIESVDSEVEERQAHMEEEVQLQENGTEPVISRVYHCVRCSAQYNSFEEFDIHSCASASEAVKDNQNGTFKCDVCDTSFPTNKSLRLHSRMHDPIKQRPIEAPVEYKSSSKRVVKDELLDPGSKVDKFHCQLCNKWMHVGYKKVHEMTFHAGLEQYNCEICNRKFFTEENLEMHLTVHNSEKVVVNKTDRPLPYECNYCNRQFSRPHEKVKHERIHTGERPHVCEICGKAFRVSYCLTLHMRTHTGARPYECSHCGKRFKAHSVYNHHVLTHSNIRAYKCPYCPKSFKTSVQLAGHKNAHTKPFSCTECNRPFASLYAVRVHMETHKRRNNLKFNCEMCGASYARAFALKDHIKSHMNVQVEESKEFYIPEVAAATLAIIPKDEHEKFEKINESEFDFPNTIWVVRPTWEVALKSSAMAPVVFFGVIVNLILLLLLAKCKWLHTSTNLLIGNMALADLCTLVMCPWMLLVNHFYQNYELGHFGCKMEGFITGALLITSVMNIVAISYDRLTAIVLPQEARLSLRAVVCIAIGTWFIGFIFAMPLSIWRYYRERQWLNFLEKYCTENIQILPTYWHVLIFILVWIPLVVLTVCYSAIFYRLDKYEQKILRREHPISVRYKTRVARTIFAVLITFVICRTPFTSLIFWRSKILKEERVNAIGTSFHILWFISHFLMYLNCAINPLIYGLTNDNYRKAFVSSSFCKWITGKSDNKEKFANFEKKEKRSPAVKSDNRKEQNSFKYRKFWTRGGKMVFSDKTSKSSDKKTPDSPVVSSKITPIPDDFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -