Mlon012390.1
Basic Information
- Insect
- Mystacides longicornis
- Gene Symbol
- ZNF217
- Assembly
- GCA_963576905.1
- Location
- OY756425.1:3161947-3164032[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0029 0.3 12.9 1.9 1 23 193 215 193 215 0.98 2 11 2.2e-05 0.0022 19.6 0.8 1 23 221 243 221 243 0.98 3 11 0.01 1 11.2 4.5 1 23 249 272 249 272 0.92 4 11 0.73 73 5.3 4.6 1 21 278 298 278 300 0.94 5 11 0.0002 0.02 16.5 1.9 1 23 306 328 306 328 0.99 6 11 4.6e-06 0.00047 21.7 0.7 1 23 334 356 334 356 0.99 7 11 0.0012 0.13 14.1 0.1 1 23 364 387 364 387 0.97 8 11 3.5e-05 0.0035 18.9 0.7 2 23 394 415 393 415 0.97 9 11 0.0001 0.01 17.5 0.7 1 23 421 443 421 443 0.99 10 11 0.017 1.8 10.4 4.0 1 19 449 467 449 472 0.90 11 11 5.1e-05 0.0052 18.4 3.0 1 23 486 508 486 508 0.96
Sequence Information
- Coding Sequence
- ATGGCGCCTAAGAGAAAAAAATCCCCTAAGggaaaagcaaataaaaacatgaacattcaaaaatattttgataattttaataaagagCTTGACGATAAAGATACAGTTGTTAATGATGCTACGGAAATAACCAAAATAGAGTCTGTGGAGAAAGCAATAGAAATTAAAGTGAAAAATGACACGTCGCAGATAGAGGATGAAGCCGATAAATCTGTAGCACAAGAAGGAACATATTTTGTAGATGAAGATGGACAATTTTATTTCCAACCTGCAGTGGAGGAAGTCTCCTTTCAAGTTATAGAGGATGAGACTCAGGAGAAAAGTATTTTGCCTGACGGTTTAGAAGAAGCACCCAACAATGAAGAAGAGTTAAGCTACGTGTATGTGGTGGCTGAAGACAGTGTGGAGGAGGACGGCACGGATGACAATAACgaagttgaaaataatatcactgtttacgattttgaagaagaagaacatcCGTTGCCTGCCCAAGCTGAAGACCCATCCGAACTAGAGGATGACAAGACCAAGATCAAGATGAAACCAGATGTTCCGGCTAAAGCTAGGAAATTGTTTGAGTGCCCTCATTGTGAGTACACTAATACCAAGAAATTCCTTTTAGCCAGGCATATCAAAGTTCACAATGAAGAAAAGCCTCATAAGTGTCCAGTTTGCTCCAAGGGTTTCAGATCTCTGGTTGCGCTAAATAACCACGAAAACACTCACACAGGCTCTCGTCCATACAAATGTGAACAGTGTTCTTCCTCATTTTCAACAACTGGTGAATTGACAAGACACTGTCGCTATCGCCATACCATGGAACGACCCCACAAATGTACAGAATGCGACTATTCTGCGGTGGAGTATGGCAAGCTAAAGAGGCACTTCAGGTGTCACACGGGCGAGAGGCCTTATCAATGTCCACACTGCACATACGCTTCACCGGATACTTTCAAGTTAAAGCGACATCTTAGGATCCACACTGGAGAACGTCCATACgaatgtgaaatatgtcaagcTTCATTTAGTCAGTCAAACTCCCTTAAATCACACCGACTTACTCACTTCCCAGACAAGAGGGCCACCTACCAGTGCTCACTTTGTCCGGCTAAGAGTGCCCGCAAGGCGGATCTTCGTGGACATATTAGGCTTTTGCATACGGCTACAGATCCCATAGAATGTAAAAAGTGTGGCAAGATGCTTGAGGACAGATATTCGTATAAACTTCACATCAGAACACACATCGGAGAGAAGAGCtacaaatgcaatatttgtCCCTACGCTTCTGTGTCTAGATTACATTTACAAACTCATATGTTGGTTCACACGGACCAGAAACCATTTGCGTGTGATACATGTGATCAACGATTTAGGAACAAACAACTCATGAAGAGACATTGCAATCTTTACCATAATCCCAATTATGAACCTCCAAAATCAAAGCCGAAAAATCACGAGTGCCATGTGTGCGGAAACAGGTTTATTCACAAAGGAAACCTAATTAGGCATTTAGCACTTCACGATCCTGATTCCAAAGTGCACGAGGATAATTTGGCTTTGAAATTGGGACGAAAACATAAGTTACTTCAACATGTGGAAGTAGAGGACGCTActgaaatatttattcaaaataatgccAATGAAGATGACAGTCAGTTTGCTGTGTACGAGATGATTCAAGTCGAAGAAAACGGCCAAGAGactattaaaattatagattCTGTGGAAGAATTTACAGAGAAAAAAGTAGTGAGACAAGTTTCAAATACCAAAGAAGACATGAAGAATTGTTTTGGATTTGACGAGGAGGAAGATGATGGCTGTCAAATAATATTGCAGAATGACGACAGTGACGGGGGGGATTCTGATTAA
- Protein Sequence
- MAPKRKKSPKGKANKNMNIQKYFDNFNKELDDKDTVVNDATEITKIESVEKAIEIKVKNDTSQIEDEADKSVAQEGTYFVDEDGQFYFQPAVEEVSFQVIEDETQEKSILPDGLEEAPNNEEELSYVYVVAEDSVEEDGTDDNNEVENNITVYDFEEEEHPLPAQAEDPSELEDDKTKIKMKPDVPAKARKLFECPHCEYTNTKKFLLARHIKVHNEEKPHKCPVCSKGFRSLVALNNHENTHTGSRPYKCEQCSSSFSTTGELTRHCRYRHTMERPHKCTECDYSAVEYGKLKRHFRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGERPYECEICQASFSQSNSLKSHRLTHFPDKRATYQCSLCPAKSARKADLRGHIRLLHTATDPIECKKCGKMLEDRYSYKLHIRTHIGEKSYKCNICPYASVSRLHLQTHMLVHTDQKPFACDTCDQRFRNKQLMKRHCNLYHNPNYEPPKSKPKNHECHVCGNRFIHKGNLIRHLALHDPDSKVHEDNLALKLGRKHKLLQHVEVEDATEIFIQNNANEDDSQFAVYEMIQVEENGQETIKIIDSVEEFTEKKVVRQVSNTKEDMKNCFGFDEEEDDGCQIILQNDDSDGGDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -