Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756430.1:27117406-27119619[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.5 6.6e+02 2.3 0.1 2 14 63 75 62 76 0.85

2 14 1.1e-05 0.0011 20.5 3.0 1 23 364 387 364 387 0.92

3 14 1.5e-05 0.0015 20.1 2.0 2 23 394 416 393 416 0.95

4 14 6e-05 0.006 18.2 4.1 3 21 432 450 430 452 0.93

5 14 1e-05 0.001 20.6 0.8 1 23 458 480 458 480 0.97

6 14 0.00027 0.027 16.1 3.3 1 23 485 508 485 508 0.97

7 14 0.0076 0.77 11.6 0.1 1 23 514 536 514 536 0.98

8 14 6.3e-05 0.0064 18.1 1.4 1 23 541 563 541 563 0.99

9 14 8.2e-06 0.00083 20.9 3.9 1 23 569 591 569 591 0.99

10 14 2.3e-06 0.00023 22.7 0.8 1 23 597 619 597 619 0.98

11 14 1.3e-05 0.0014 20.2 2.6 1 23 625 647 625 647 0.98

12 14 0.0004 0.04 15.6 0.7 2 23 653 674 652 674 0.97

13 14 0.00013 0.013 17.2 2.6 1 23 680 702 680 702 0.99

14 14 8.2e-07 8.3e-05 24.1 2.1 1 23 708 730 708 730 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.5	6.6e+02	2.3	0.1	2	14	63	75	62	76	0.85
2	14	1.1e-05	0.0011	20.5	3.0	1	23	364	387	364	387	0.92
3	14	1.5e-05	0.0015	20.1	2.0	2	23	394	416	393	416	0.95
4	14	6e-05	0.006	18.2	4.1	3	21	432	450	430	452	0.93
5	14	1e-05	0.001	20.6	0.8	1	23	458	480	458	480	0.97
6	14	0.00027	0.027	16.1	3.3	1	23	485	508	485	508	0.97
7	14	0.0076	0.77	11.6	0.1	1	23	514	536	514	536	0.98
8	14	6.3e-05	0.0064	18.1	1.4	1	23	541	563	541	563	0.99
9	14	8.2e-06	0.00083	20.9	3.9	1	23	569	591	569	591	0.99
10	14	2.3e-06	0.00023	22.7	0.8	1	23	597	619	597	619	0.98
11	14	1.3e-05	0.0014	20.2	2.6	1	23	625	647	625	647	0.98
12	14	0.0004	0.04	15.6	0.7	2	23	653	674	652	674	0.97
13	14	0.00013	0.013	17.2	2.6	1	23	680	702	680	702	0.99
14	14	8.2e-07	8.3e-05	24.1	2.1	1	23	708	730	708	730	0.99

Sequence Information

Coding Sequence: ATGAATGAAGCGGAAATGAAAAACGATCCGCCAAGTGTAAATAGTTTGATAATAAAGGAAGAACCTGAAGATGAGCAATATTACGAATCTATCGATGTCGTGGAACATGAGGTCAAATATGAGCCGGATAATCTATACAGTTGTGTTGCAATGGATAAGCAGAATtttgaagaatccaataaatcaatgtGCAACATTTGTAGAGTGCCATTCAGGAACGAACATCAAGAAATGTGTTCACATGTTTTGCCAATAGAACATGATCCTTCTAACAACAGTATACCGacaactaaatttgaaaaacatgAACAAGGCTTGAGTGTATTGAGGTATGAAACTTTGCCCATAGATCATGTTCCTGATAAACCCTTGGGTTTCAATGTTGCTAAGGAAGTGTATCAAATTGCACATCTCTTAAAGAAACACCAAGGCATTCAGAATAGTAAATCCAATGCTGAGGAATTTGATGAGCAAATTCATGATGACGTAAATACCCTTGAAACTTTATCCCTAGACCAAATTCCTAAGAAATGTTTAGAGCcaaaaaattttaagaaagtCAATAAAAATACTAGACTTTTAAAGAAACTTAGAAATATTAAACAGTTGGAAATACTACCCATAGAGCATATTTCTGAAAATCACATAGAAAAGAAAGTTCCCAAGAAAGTTTATGTGACCAAAAAGTCCTTGGCGCATCGGTTACACAATAAACAGCTTTCCATAGAAGATTTACCCGAAATACCATTAGACTATTCTGTTTGTAAGAgagtttataaaaatacaagtcTTTGGAAGAAATATCAGACTCTACAACTTatgaaaaaatatcagaatAATCAGAATCTTGAAACCTTACCTATAGAACATACTCCCAATGAAAGTGAGCAAGTCAATCTGCATAATGTTGAGAATAGTTTTCCCAAGTCTGATACGGATGCTGTGGAGTCAGTTTTGGAACCTGATGTTGATTCTAAACATATTGAAACTCTTCCCATAGAGCACGTCCCAGACACACTCCTGCAGCCGATAGTCGAGAAAAAAAAAGCCAAAAGAAATAGACGTTCCAAATATCACAATACACACTCGTTTAAATGTGAAATTTGTAGTAAAGAATTTAGTCATCCTCGTAATTTGAGAAGACACAAGCTGTTTGTGCACACCGATATAAAGCCTAACAAATGCACCTTGTGCGGGCAAAAGTTTAAACAATGGTACACCTTGAAGAAGCACGAACGAGAAAATCATCCGGAATATTGTCAACAGAATTCAGACCAAAACACTATCGTCAACTGTGACATGTGTGATAAATCATTCAAAACTAAAAACTCACTCAAGCGACATCAAATGTGTCACGTTGGCGATAAACCCTACGAATGCGATATATGTCAAAAACAATTTTATCGTGCCGATAatttaaaaatgcataagaGCATTCATGGTGAGAAGACTTTTGAATGTGACGTTTGTTTAAGAAAGTTTGTACGATCGACACACTTACAGAACCATAAGAAAAAAGTACACGTTATTGCGAAACCTTATGTGTGTAATATTTGTAATGAAGCTTTTGCTGTTATAACCGAGTACGATATTCACAAAAAGACTCATAAAAAAACTCAATTCAAGTGTGATATATGCCTCAAGTACTACAAGCGCATGGTCAATTTGAAAATTCACCAGCGAATTCATTCAGGCGATAAACCTTTCAAGTGCGAATATTGCGACAAATGTTTTTCCCAGAACTCCATATTGAAGATTCATCGACGTGTTCACACGGGGGAAAAACCGTTTGAATGCGATCTGTGCGATGCCAAGTTTAATTACTCTAGTAATTTGACGAGACATATCCTGAAACATAACGAAGATAGACGCTACGAATGCACTGAATGCGGGAAGAGGTTTTATCAATTGAATCATCTCAACTCGCACAAACTTATCCATGATAAAAGGTCGGTCAAATGTGAGGTTTGTAAAAGAAGATTTGACAGTGTCGAGAAATTAGAAAATCATCAGCAGTCTCATTCCCTGGAACATTTGTACAAGTGTGATAAGTGCGAGAAATCTTTTCAGCTGCCGCACGTATTGAAAAATCATCAACGGGTTCACAGTGAAGAGAGACCTTACCAATGCGATATTTGTAAGACATTGTTTAAGGATTCCACCAACCTGAAGCGACACATACGCCGTCACAAAAAAGCTGAATTTTGTGAATAA
Protein Sequence: MNEAEMKNDPPSVNSLIIKEEPEDEQYYESIDVVEHEVKYEPDNLYSCVAMDKQNFEESNKSMCNICRVPFRNEHQEMCSHVLPIEHDPSNNSIPTTKFEKHEQGLSVLRYETLPIDHVPDKPLGFNVAKEVYQIAHLLKKHQGIQNSKSNAEEFDEQIHDDVNTLETLSLDQIPKKCLEPKNFKKVNKNTRLLKKLRNIKQLEILPIEHISENHIEKKVPKKVYVTKKSLAHRLHNKQLSIEDLPEIPLDYSVCKRVYKNTSLWKKYQTLQLMKKYQNNQNLETLPIEHTPNESEQVNLHNVENSFPKSDTDAVESVLEPDVDSKHIETLPIEHVPDTLLQPIVEKKKAKRNRRSKYHNTHSFKCEICSKEFSHPRNLRRHKLFVHTDIKPNKCTLCGQKFKQWYTLKKHERENHPEYCQQNSDQNTIVNCDMCDKSFKTKNSLKRHQMCHVGDKPYECDICQKQFYRADNLKMHKSIHGEKTFECDVCLRKFVRSTHLQNHKKKVHVIAKPYVCNICNEAFAVITEYDIHKKTHKKTQFKCDICLKYYKRMVNLKIHQRIHSGDKPFKCEYCDKCFSQNSILKIHRRVHTGEKPFECDLCDAKFNYSSNLTRHILKHNEDRRYECTECGKRFYQLNHLNSHKLIHDKRSVKCEVCKRRFDSVEKLENHQQSHSLEHLYKCDKCEKSFQLPHVLKNHQRVHSEERPYQCDICKTLFKDSTNLKRHIRRHKKAEFCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -