Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756424.1:37956388-37961735[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.19 19 7.2 0.1 3 21 233 251 231 252 0.93

2 19 4e-06 0.0004 21.9 1.2 2 23 335 356 334 356 0.97

3 19 0.034 3.4 9.5 3.0 1 23 362 386 362 386 0.97

4 19 0.029 2.9 9.8 3.5 1 23 392 416 392 416 0.95

5 19 0.001 0.11 14.3 0.7 1 23 422 445 422 445 0.96

6 19 0.0071 0.71 11.7 0.1 1 23 451 474 451 474 0.92

7 19 0.00024 0.024 16.3 0.5 1 23 481 503 481 503 0.98

8 19 0.0017 0.17 13.6 2.4 1 23 509 531 509 531 0.99

9 19 5.4e-06 0.00055 21.5 0.5 1 23 537 559 537 559 0.98

10 19 0.00086 0.087 14.6 0.4 1 23 565 587 565 587 0.95

11 19 2.9e-05 0.0029 19.2 1.9 1 23 593 615 593 615 0.97

12 19 2.1e-05 0.0022 19.6 1.1 1 23 621 643 621 643 0.97

13 19 2.7e-05 0.0028 19.3 0.8 1 23 649 671 649 671 0.98

14 19 0.0066 0.67 11.8 3.1 1 23 677 699 677 699 0.98

15 19 0.00039 0.04 15.6 1.8 1 23 745 767 745 767 0.98

16 19 0.0051 0.52 12.1 1.3 1 23 773 795 773 795 0.96

17 19 3.8e-07 3.9e-05 25.1 0.4 1 23 801 823 801 823 0.99

18 19 0.00015 0.015 16.9 8.0 1 23 829 851 829 851 0.98

19 19 3.2e-05 0.0032 19.1 3.4 1 23 980 1003 980 1003 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.19	19	7.2	0.1	3	21	233	251	231	252	0.93
2	19	4e-06	0.0004	21.9	1.2	2	23	335	356	334	356	0.97
3	19	0.034	3.4	9.5	3.0	1	23	362	386	362	386	0.97
4	19	0.029	2.9	9.8	3.5	1	23	392	416	392	416	0.95
5	19	0.001	0.11	14.3	0.7	1	23	422	445	422	445	0.96
6	19	0.0071	0.71	11.7	0.1	1	23	451	474	451	474	0.92
7	19	0.00024	0.024	16.3	0.5	1	23	481	503	481	503	0.98
8	19	0.0017	0.17	13.6	2.4	1	23	509	531	509	531	0.99
9	19	5.4e-06	0.00055	21.5	0.5	1	23	537	559	537	559	0.98
10	19	0.00086	0.087	14.6	0.4	1	23	565	587	565	587	0.95
11	19	2.9e-05	0.0029	19.2	1.9	1	23	593	615	593	615	0.97
12	19	2.1e-05	0.0022	19.6	1.1	1	23	621	643	621	643	0.97
13	19	2.7e-05	0.0028	19.3	0.8	1	23	649	671	649	671	0.98
14	19	0.0066	0.67	11.8	3.1	1	23	677	699	677	699	0.98
15	19	0.00039	0.04	15.6	1.8	1	23	745	767	745	767	0.98
16	19	0.0051	0.52	12.1	1.3	1	23	773	795	773	795	0.96
17	19	3.8e-07	3.9e-05	25.1	0.4	1	23	801	823	801	823	0.99
18	19	0.00015	0.015	16.9	8.0	1	23	829	851	829	851	0.98
19	19	3.2e-05	0.0032	19.1	3.4	1	23	980	1003	980	1003	0.90

Sequence Information

Coding Sequence: ATGTTTAATGTTAAAGATAACCCAATATTAGAACTAATAACTCAAAATAAGGTAACTTATGGATGGGTTTGTTACAATTGCTGTGAACTGCTTAGGAAAATGACCGACTTTAGAGAAGCTTGCATTGCCTCGGAAATATTTTTAAGCCAACTGCACGAGAATGGCGTTCCTTACTTGGATTATGAGAACTCTGTCAAGAGAGAAGAAACCCGTAAGATATTAGTTGGAAAGTTTGGTTTCTTGGAGCTACTCCATTCCAACACTCTGGCCATAAGCTTAGTGCCAAGTGGTGGTGGACAGGCAGGAAATGAGTGTGGCAAAGAGTCCCATGTTAGCGTGTGGTCATTCACCACAGAAGAAGCAGACAGAAGGCGGCAAAAGAACTACTGCCAGGGCATGGAGCAGTGTGATAATAAGGAAGTCGCTGTGGCAGCATTTGTGAAGGTTGAATGCACGGAGCTGCTCGACACCAAGAGCAGTGTTCACACTCACCTGCCCGATACTTACCATTATTCTGGCAATGACTACACCAACGATGGTGGATCAGACACGGATGACGAGACCTACGATGTTCCTCTAATTAATGTCGCCATGAAGTCCAGCCAGTGTTCTGCTGATTCTAACCAACTCAAAGATGAAAAATCAAATGAAATCAAGACTGAAGACGAGGATAGTGTGGGCGGCAGTGCAGTTAATTGCAAATATTGTgcggaatttttttcaaaagctgCTCACTTGCCAGCTCATTATCGTATTTGTAAGAAGCGCAAGGAGAAGCGAGCctcttccaaaaaaaataagtcAAAAGAAGATGTTTGTGAAAGTGTCTCTGGGGAGTTGCAGGATGTCGTCAAGGTTGAGCCGGAAGATGTGGACGAGGAAGACAATGTGCTGTGCCACGTCATCAGGGAGCAGGGGGACGTCCTTGgtatgaagaaaaagaagaagaaaagtagATCTAAAAAGAAGAGAATAGTGGATGGTGATGTGGCAGAGAGTGTGAGCTGCGAGATGTGCTCCAAGGTGTTTCTTAGATCCAGTCAGTTGCAGAGGCACATGCGCACACACAATGGGGAGCGCCCATTCAAGTGTGAGGTGAGCAGTTGCACGTACACCTGCTCACGGGCTGACGACATGAAGACGCACGAGCGCAAGCACTCGGGGGAGAGGCCCTACGCCTGCAGCGTGGAGGGCTGCCACTTCACCTCCTCCTACGCCCACCACCTCAACAGACACGTGCGGGCCCACAACGCCAccaagGAGTTCATGTGTGATTCCTGTGGGAAGAAGTTCCGGGAATCCAGTATATTAAAACAGCACCAGCTGTCAGCCCACAGCTGTGTGAAGCCATATGCTTGTGAAGAATGTGATTATTCTACTGCTTATCCTAATTTATTAAAAGATCATCAAGTCCAGGTCCATCGAGGCATGGCCAAAAACTATGTTTGTGACGAATGCGGCCACTCCTACTGGCGGGCTGATCAACTGAAAGTGCACAAGAGGGTCCACAGCGGAGAGAAGCCGTTCAAGTGCGACGTCTGTCAGTTTGCCACCTCCCACTCCAATGCACTCAAGGTCCACAAGCGCTCCCATAGTAATGAACGGCCATACATATGTGAAGAGTGTGCACACGCATTTGCGCGGAAGGACGACTTGAAAACACACATGCGGATACATTCAGGAGACAGACCTTACGCGTGCGATAGGTGCCCGTACACGGCTGCTCAAAAAAGTAACTTGAAGAGACACAAGGTGTCCCACCTGGGGATCAAGCCTTTTTGCTGTGACGAGTGCGGCAAGAGGTTTGCTGAAGCCAGCTCTCTGAAGATGCACAAGCGCCTCCACGCTGGCGTGAGACCTTTCAAATGTCCCCACTGCCCTTACAGCACCTCACAGTCGGGTGGCCTCAAGAGACATCTGGTGTCGCACTCTGGGGAGAAGCCCTTTGTGTGCCATGTTTGTGGCAAGgCCTTCACGCTGATCTATGATCTGAACAACCACAGTCGAATACACACGGGTGAGAAGCCATACATCTGTGACATCTGCAACTTTGCTACATCTCACCACAACGCCCTGAAGATACACAAGAGATCTCACACAGGTGATGCTTCTCTCCCATTGGTTAACGACAATATGCCATTGTTAGGATGGAGGCTCAAACTGATTGCTATTATTTGTTACTTATCATTACACCCAGTCCATTCGCCCAGCTGCTCTGAAGgtgaaaaaccatttcGCTGTGATGTGTGCGCCCAGTGCTTTAGCAGGGGAGGAGACCTCAAGACACACAAGAGAATACACACGGGGGAGAAACCTTACGCCTGCACTGTCTGCTGCTACACGGCCACCCAAGCCAGCAACTTGAAGAGGCACATGGTCTCTCATTCTGgGAAAAAACCATTCACATGTGGAGACTGCGGCAAGTCCTTCACAGAGGCTGGTACTCTTCGGATTCACAGACGCACACACACTGGAGAGCGGCCCTACTGCTGTCATCATTGTGCCCAGGCATTCTCGCAGGCAGGCCATCTCAGGAAACACATGCGACTTCACATCAACACATCGACTGCCACCGCAACATTGGAAGCGTCCAACATTGCCACAGATGTGACTCGGGTGAATAGTAACGAACCTGGCGTAGAAACTAGCGAGAGTCCGTCTTCTCTGCTCCTACATGGCACATCCAATGCCAACTCTCTTATTATCACTAACATATTCAAAACTGAAATAAACTCTCTAACTTCCACCAACAACCAAGATGCTTTAAATTTGGGAATCTCTCATTCAACTCTCACATCAGAATCAACTAACGGGCATCAGGATAACTCCGACAACTTGATCAGCCACCTAAATAACTTGAGACGCCCCAATAATATCAGTGACTCTCATAACCCTTCTTTGGAAACTAGTAACGCTCCTAACCACGAGGGTGGGAGTCACCGCTGCAGCGAGTGTGGGCAGTGCTTCTCTCAGAGGCGGCAACTGACCAAGCACCTGGTAGCCGTGCATGGAGCCCAGGAGGAAGACAACAAAAGTGATGTGATCATTCAGCTGACCACTCCATAG
Protein Sequence: MFNVKDNPILELITQNKVTYGWVCYNCCELLRKMTDFREACIASEIFLSQLHENGVPYLDYENSVKREETRKILVGKFGFLELLHSNTLAISLVPSGGGQAGNECGKESHVSVWSFTTEEADRRRQKNYCQGMEQCDNKEVAVAAFVKVECTELLDTKSSVHTHLPDTYHYSGNDYTNDGGSDTDDETYDVPLINVAMKSSQCSADSNQLKDEKSNEIKTEDEDSVGGSAVNCKYCAEFFSKAAHLPAHYRICKKRKEKRASSKKNKSKEDVCESVSGELQDVVKVEPEDVDEEDNVLCHVIREQGDVLGMKKKKKKSRSKKKRIVDGDVAESVSCEMCSKVFLRSSQLQRHMRTHNGERPFKCEVSSCTYTCSRADDMKTHERKHSGERPYACSVEGCHFTSSYAHHLNRHVRAHNATKEFMCDSCGKKFRESSILKQHQLSAHSCVKPYACEECDYSTAYPNLLKDHQVQVHRGMAKNYVCDECGHSYWRADQLKVHKRVHSGEKPFKCDVCQFATSHSNALKVHKRSHSNERPYICEECAHAFARKDDLKTHMRIHSGDRPYACDRCPYTAAQKSNLKRHKVSHLGIKPFCCDECGKRFAEASSLKMHKRLHAGVRPFKCPHCPYSTSQSGGLKRHLVSHSGEKPFVCHVCGKAFTLIYDLNNHSRIHTGEKPYICDICNFATSHHNALKIHKRSHTGDASLPLVNDNMPLLGWRLKLIAIICYLSLHPVHSPSCSEGEKPFRCDVCAQCFSRGGDLKTHKRIHTGEKPYACTVCCYTATQASNLKRHMVSHSGKKPFTCGDCGKSFTEAGTLRIHRRTHTGERPYCCHHCAQAFSQAGHLRKHMRLHINTSTATATLEASNIATDVTRVNSNEPGVETSESPSSLLLHGTSNANSLIITNIFKTEINSLTSTNNQDALNLGISHSTLTSESTNGHQDNSDNLISHLNNLRRPNNISDSHNPSLETSNAPNHEGGSHRCSECGQCFSQRRQLTKHLVAVHGAQEEDNKSDVIIQLTTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -