Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756426.1:921341-924073[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0002 0.021 16.5 2.6 1 23 118 140 118 140 0.99

2 24 4.5e-07 4.6e-05 24.9 0.6 1 23 146 168 146 168 0.98

3 24 7.3e-05 0.0074 17.9 1.0 1 23 174 196 174 196 0.98

4 24 1.9e-06 0.00019 22.9 0.9 1 23 202 224 202 224 0.98

5 24 7.6e-06 0.00077 21.0 0.1 1 23 230 252 230 252 0.98

6 24 9.4e-05 0.0096 17.6 0.5 1 23 258 280 258 280 0.98

7 24 1.1e-06 0.00011 23.7 1.2 1 23 286 308 286 308 0.98

8 24 5.2e-07 5.3e-05 24.7 0.3 1 23 314 336 314 336 0.98

9 24 5.2e-05 0.0053 18.4 1.1 1 23 342 364 342 364 0.98

10 24 6.2e-05 0.0063 18.1 0.4 1 23 370 392 370 392 0.98

11 24 0.00039 0.039 15.6 2.3 1 23 398 420 398 420 0.98

12 24 0.00053 0.054 15.2 1.4 1 23 426 448 426 448 0.98

13 24 0.0044 0.44 12.3 1.4 2 23 455 476 454 476 0.95

14 24 7.3e-05 0.0073 17.9 0.1 1 23 570 592 570 592 0.99

15 24 8.9e-05 0.009 17.7 1.6 1 23 598 620 598 620 0.98

16 24 4.6e-06 0.00046 21.7 0.4 1 23 626 648 626 648 0.98

17 24 7.4e-06 0.00075 21.0 0.6 1 23 654 676 654 676 0.98

18 24 1.3e-05 0.0014 20.2 1.0 1 23 682 704 682 704 0.97

19 24 3e-07 3e-05 25.5 1.0 1 23 710 732 710 732 0.98

20 24 2.3e-05 0.0024 19.5 1.5 1 23 738 760 738 760 0.99

21 24 0.00048 0.049 15.3 1.2 1 23 766 788 766 788 0.98

22 24 0.00041 0.042 15.6 7.7 1 23 794 816 794 816 0.98

23 24 7.4e-05 0.0075 17.9 1.7 1 23 822 844 822 844 0.97

24 24 4.2e-05 0.0042 18.7 0.7 2 23 851 872 850 872 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0002	0.021	16.5	2.6	1	23	118	140	118	140	0.99
2	24	4.5e-07	4.6e-05	24.9	0.6	1	23	146	168	146	168	0.98
3	24	7.3e-05	0.0074	17.9	1.0	1	23	174	196	174	196	0.98
4	24	1.9e-06	0.00019	22.9	0.9	1	23	202	224	202	224	0.98
5	24	7.6e-06	0.00077	21.0	0.1	1	23	230	252	230	252	0.98
6	24	9.4e-05	0.0096	17.6	0.5	1	23	258	280	258	280	0.98
7	24	1.1e-06	0.00011	23.7	1.2	1	23	286	308	286	308	0.98
8	24	5.2e-07	5.3e-05	24.7	0.3	1	23	314	336	314	336	0.98
9	24	5.2e-05	0.0053	18.4	1.1	1	23	342	364	342	364	0.98
10	24	6.2e-05	0.0063	18.1	0.4	1	23	370	392	370	392	0.98
11	24	0.00039	0.039	15.6	2.3	1	23	398	420	398	420	0.98
12	24	0.00053	0.054	15.2	1.4	1	23	426	448	426	448	0.98
13	24	0.0044	0.44	12.3	1.4	2	23	455	476	454	476	0.95
14	24	7.3e-05	0.0073	17.9	0.1	1	23	570	592	570	592	0.99
15	24	8.9e-05	0.009	17.7	1.6	1	23	598	620	598	620	0.98
16	24	4.6e-06	0.00046	21.7	0.4	1	23	626	648	626	648	0.98
17	24	7.4e-06	0.00075	21.0	0.6	1	23	654	676	654	676	0.98
18	24	1.3e-05	0.0014	20.2	1.0	1	23	682	704	682	704	0.97
19	24	3e-07	3e-05	25.5	1.0	1	23	710	732	710	732	0.98
20	24	2.3e-05	0.0024	19.5	1.5	1	23	738	760	738	760	0.99
21	24	0.00048	0.049	15.3	1.2	1	23	766	788	766	788	0.98
22	24	0.00041	0.042	15.6	7.7	1	23	794	816	794	816	0.98
23	24	7.4e-05	0.0075	17.9	1.7	1	23	822	844	822	844	0.97
24	24	4.2e-05	0.0042	18.7	0.7	2	23	851	872	850	872	0.97

Sequence Information

Coding Sequence: ATGGCATTAAACACAGATGTGGGCGATATGTTAGTTTCCGAAATAGATAAGAAAAGCATAAAAGTGGAACCTTCGGAGAGCAATGAAAGTGATATCAAAGGAGAAGCAAGTCAGAATCATCTTTGCTTAGAATTTAAAAGTGAAAGCAAATTGAATGTAAGCAATGATATAACCATGAAGTTGGAACCTATTAAACGTAGTAACGAAGAGTGTCAAAGAAAACTATGTAGGAATATTAGTAGTGATGCGAATGTTAGATTAGAACAAATAAATGATCCAAAAACAAACTCGGAACTGAAGCATAAAGGTTCGGATAACGATGGTAGTACCTTCCATAGGGAAGAGAAGCCATTTAAATGTAATGTGTGTAGTGCGAAATTCAAGAAAAAAGGACGTTTGACTGCTCACAAGCGCACACATAGTGGACAAAAGCCATTCAGTTGTAAAGTTTGTGGTAAAAAGTTTGCGCAAAGTTCATCTATCATTGCTCACATGCGCAAACATACTGGAGAAAAACCATTCAGTTGTAAAGTTTGTGGGGCATTATTTGCTCATAATACATCTTACATTGTTCACATGCGCACGcatactggagaaaagccattcaaTTGTACCGTTTGCGGAGCAAAATTTGCTCATAACACATCTTTAATTGCTCACATGCGCACAcatactggagaaaagccattcagTTGTAATGTTTGTGGAGCATTATTTGCTCAAAATTCTGCTTTCATTGCTCACATGCGCACACATACTGGGGAGAAGCCATTCAACTGTACCGTTTGTGGGGGATTTTTTgctcaatattcaacattaatagCTCACAAGCGCACACATACGGGAGAGAGGCCATTCAGctgtagtgtttgtaatgaaaatttttcgCGAAAGGAATTGCTTACTATTCATATGCGTAAACATACTGGAGAAAATCCATTCAATTGTCCTGTTTGCAGTGAAATATTTACCCAAAAGTCAACATTGAACGTTCACATGCGTATACATACAGGCGAAAAGCCATTCAATTGTAATGTTTGTAGTGCAAAGTTTGCGCGAAACCAATTTTTGACAATTCACATGCGCACCCATACTGGGGAGAAACCATTTATCTGTAAGATTTGTCCAGAGAAATTCATTTCTTCTAGAGGTTTGAGAGAACACCTCCAAAAGCATGCTAAAATAAAAGTGCACGAGTGTAAAATATGCCAGGCAAAGTTTGACAAAccaattgaattgaaaaaacaTTTCAGAACTCATGCTAGTGAGAAATCATTTGAGTGTAATATTTGTGGTCGATTACTTTCTTCCTCTCATGGTTATAAACTACATATCAAAACTCATTCTCGTGAGAAAGCACTCGAGTGCCAAACTTGTGGTAAAACTTTTAGTGAATCTGCTGCGTTTAATTGTCACCTTAAAATTCATTCATCTGAAAATGATGAATCTGCTAGACTTATTAAAACAGAACATGATGAATCACCTACGCTCATTAAAACAGATGAGAAGTCAACTATGTTTATTAAAACAGAATATGAGGAATCAACTGAAGTTAGAAAACTATGTACACCTTTTTCCAATACTAACAGTGATACGAAGGTTAAGTTACCAGAAATAAACAGTGATCATAATGAAAATAGAAATTCAGATCTTCGGGAGAAAAGTTTGGATAAAGAAGATCATACATTCCATAGGGAGGATAAGCAATTTAAATGTAATGTGTGTAGTGCGATATTTACGATAAAAGCAAATTTGATTGTTCACGTGCGCACCcatactggagaaaagccattcagTTGTGATGTTTGCGGTGCGAAGTTTGCTCATTATACTTCTTTCAATGGTCACATGCGCACACAtactggagaaaaaccatatgatTGTAAAGTTTGTGGAGcattattttctcaaaattcATCTTTCTTAGCTCACATGCGCACACATACTGGAGAAAAACCATTCAATTGTACCTTTTGTGAGGCAAAATTTGCACAAAATTCAACTTTGATAGCTCACATGCGCACACATACGGGAGAAAAGCCATTCTGTTGTACTGTCTGTGATGAAAAGTTTGCGCGAAAGGCATTGTTGACTATTCACATACGCGAACATACTGGTGAAAACCCATTCAACtgcaacatttgtaatacaAATTTCACTCAGAGTTCATCTTTAAATGTTCACATGCGCATAcatactggagaaaagccattccgCTGTACTGATTGTAGTGCAGAGTTTGCACAAAAGAAATTTTTGACTCTTCACATGCGTACTCATACTGGTGAGAAACCGTATATTTGTAAGATCTGTTCAGAGAAATTCATTTCTTCCAGAAGGTTAAGGGAACACCTCCAAAAGCACGATAACATAAAAGTGCACAAGTGTAAAATATGCCACAAAAATTTTAACAAacttattgaatttaaaaaacatttaagAACTCATCCTAGTGAGAAATCATTTGATTGTAATATTTGCGGTAGATCACTTTCATCCTCTCATGGTTATAAACTACACATTAAAACTCATACTCGTGAGAAACCACTTGAGTGCAAAACTTGTGGTAAAACTTTTAGTGAATCTGCTGCGTTTAATTATCACCTTAAAAGTCATTCTAATGATAATGAGGAATCTGCAAGACTTATTAAAACAGATGAGGAGTCAACTAGGTTTGTTAAAACAGAATATGATGAATCATCTAAAGTTATTAAAATAGAATATGAGAAATAA
Protein Sequence: MALNTDVGDMLVSEIDKKSIKVEPSESNESDIKGEASQNHLCLEFKSESKLNVSNDITMKLEPIKRSNEECQRKLCRNISSDANVRLEQINDPKTNSELKHKGSDNDGSTFHREEKPFKCNVCSAKFKKKGRLTAHKRTHSGQKPFSCKVCGKKFAQSSSIIAHMRKHTGEKPFSCKVCGALFAHNTSYIVHMRTHTGEKPFNCTVCGAKFAHNTSLIAHMRTHTGEKPFSCNVCGALFAQNSAFIAHMRTHTGEKPFNCTVCGGFFAQYSTLIAHKRTHTGERPFSCSVCNENFSRKELLTIHMRKHTGENPFNCPVCSEIFTQKSTLNVHMRIHTGEKPFNCNVCSAKFARNQFLTIHMRTHTGEKPFICKICPEKFISSRGLREHLQKHAKIKVHECKICQAKFDKPIELKKHFRTHASEKSFECNICGRLLSSSHGYKLHIKTHSREKALECQTCGKTFSESAAFNCHLKIHSSENDESARLIKTEHDESPTLIKTDEKSTMFIKTEYEESTEVRKLCTPFSNTNSDTKVKLPEINSDHNENRNSDLREKSLDKEDHTFHREDKQFKCNVCSAIFTIKANLIVHVRTHTGEKPFSCDVCGAKFAHYTSFNGHMRTHTGEKPYDCKVCGALFSQNSSFLAHMRTHTGEKPFNCTFCEAKFAQNSTLIAHMRTHTGEKPFCCTVCDEKFARKALLTIHIREHTGENPFNCNICNTNFTQSSSLNVHMRIHTGEKPFRCTDCSAEFAQKKFLTLHMRTHTGEKPYICKICSEKFISSRRLREHLQKHDNIKVHKCKICHKNFNKLIEFKKHLRTHPSEKSFDCNICGRSLSSSHGYKLHIKTHTREKPLECKTCGKTFSESAAFNYHLKSHSNDNEESARLIKTDEESTRFVKTEYDESSKVIKIEYEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -