Basic Information

Insect: Mystacides longicornis
Gene Symbol: -
Assembly: GCA_963576905.1
Location: OY756435.1:10477622-10482734[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-07 0.00015 22.6 0.0 3 40 169 205 167 209 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-07	0.00015	22.6	0.0	3	40	169	205	167	209	0.85

Sequence Information

Coding Sequence: atgatttttttcccGATAAGATCCAATTATGCAGTAGAAGAGGATCTGGAAGCTGAACGACGACTCCGTCACAATAGGTTCCTTGCCAATCTTCGCCAGATTTTTGATCCTCTCGCAGAGTTATCGGACGTAGAGTTCACCAAAAGATATAGGTTAACCAAAAAAGGGTTCAATATTCTGTGCGAAGATTTACGGCAATTAACTGGGCTGCAGGCTACAAAGAGAGTTTCTTTGGAAACAAAAgtatgcgaTAGTGAATATAGGATACTAAGTATCAATCCTAAATTTGGAGGTGCTACCCACGATTCGTTTGTGTGGAACAGTAGTTCTCTGAATACACATATGCAAAATTTGTTCCAGCAAGGTGAAAGAGTGTGGCTGCTTGGGGATTCTGGATACCCACAAAGGCCTTGGCTTATGACGCCTGTAAGAAACCCTATTGCTGAATCACCGGATGCGagtaAAATGTCATCAAAACAAGGAAAATGGTGGGCATATGAAAAGGAACAGATAAAAAATGCAGCAAAAGATGTTGCTTTGGGAGTGCCTCTTTTAACTGCTGCCAAAAAATATGGCGTACCCCGAACAACTTTGCGGAGATACATAAAAGGAAATGATAACAAACTTAAGAAAATGGGTCCACCACCAACGCTATCTCCAAATGAAGAAAACGTTTTAGTTACATGGATAGCATCTCTTGCTGAAGCTGGATTTCCAGTTACAAAAGATACATTATTAGATagtgttcaacaacttataagaGAATTAAAACGAAAAAACGAATTCGTAAATGATCGACCTGGTCGTTCATGGTTTAATGGATTCATGAAAAGGAACCCCTCAATAGCTACAAGAGTAGCTCAAAACCTCACCATCTCAAGAGCACTTGTGACAAATGACAAATTGAGAAAATGGTTCGATGaagtttatgaatatttatcaaataaacaattaaataatatactaacGGAACCAAACAGGGTATTTAACGCAGATGAAACTGCTTTCTTTTTGAATCCAAAGGGGATGAAAGTTTTGGCTATAAAGGGAGACAAAACTGTTTACCAACATGTAAACTCTGATGAAAAAGAATGCTTGACTGTATTGGTAAATGCAAACGCAGAAGGAGAATTGGCTCCACCATTAGTAATTTTCAAATACGAGAGAATCCCTAACGAATTAGTAAGTAGTGTACCAGCAAATTGGGGGTTGGGAAAATCAGAGAGTGGGTGGATGACGGGTGCATTATTTTACGAATATATTACGAATGTTTTCTATCCATGGCtggttaaacaaaatataacttttccagtcattttatttattgatggaCACACATCCCACCTCACTTTACATACCAGCAGATTTTGTCGGGAAAACGGAATTATCATTATTGCTCTATTGCCTAATGCAACCCACCTAATCCAACCGATGGACGTTTCGGTATTTAGATCTCTAAAAGAAAACTGGAGAAGCAAAGTACACGAGTGGCGATTACACAATATTGAAAAGccaattctaaaaaaaaaagatttcgcacCATTATTAAAAGAGGTATTTGATAAAAAAGTATCACCTAATATAATAAAGAGtggttttaaaaaatgtgggtTAGTGCCATGGGATCCTTCAGCTCCAGCTATAACAGTGGATGCTAAAAAAATAGAACCGGAGAAAATATCTGTGAAAGATTTGAAAGAATGCATAAAAATTATGGAATCGTACATTGGTAAAGACAAGatggatatttttaaaaatgacgAATCAGAGATACAAGTAGAAGATAAGTCGCTACatgatttatggattaaaatTAAGAATGATGTAAAAAATGGTGAGGACTTGCAAAAAACATCAAGTGATAAAATAGATATTATTCCCAGCCCCAAAAAAACACAACCAAAAATGGCTAAAAACTCTGAAACTGTTGAGGAATTAGAGATAACAATATCGAGTGACGACAAAGAAAACGTTGCTAGCCTACTAAAAACACAGGCCATTATAGCAGAAAATAATGTTAAAGAAAGTGATAGAAATAGTATGGTCGACCTAAATACAACACCTAACCTAAATGGTGTACCTAgcccatttaaaaaatctttattttggcCTGAAGTAAATCAAAAACAggacaaaaaaaggaaaaaagagGTAGTACCATCAGTAGTTACCGCTAAGGTGTGGTTAGATTTTCATGAGCATAAGGcacaaaagaaaaaagatgcagaagaactgaaaaaaaaacgagctGAAGAGAGACtgaaaaaaagagaggaaaaaGAAAATGAGCGTAAAAGAAAAGCAGAAGAAAAAGCCAAGAGGGTCATATCAAAGACTAGGAAACCCATCAAGAAACCCAAAATGAAATTTTGCAGTCGTAATAAAACGTATTCTTCAAcatccgaagacgaggaaattTGGATACCATCAAGTAGCAGTGCTGAAGACATATCTGTATGCCAAGAAGAAAGTGTTGAGGAAATACATGAAGAAAAACATATTCGCGGTGatgtcattaataaaaataaacattttggtGCAGTCATGGATGTCACAAAGCCATCTTCTAGCAAGACTTGTTCTGAATGTTCGAGCAACGCAACAAATGGAGTCAAATGTATAGCTTGTACAAAGTGGTATTGCATGAAATGTAGCGATTACTACGGACATTTTGATTTTGTGTGTATGTCTTGTTTAACAGAGTCACAATAA
Protein Sequence: MIFFPIRSNYAVEEDLEAERRLRHNRFLANLRQIFDPLAELSDVEFTKRYRLTKKGFNILCEDLRQLTGLQATKRVSLETKVCDSEYRILSINPKFGGATHDSFVWNSSSLNTHMQNLFQQGERVWLLGDSGYPQRPWLMTPVRNPIAESPDASKMSSKQGKWWAYEKEQIKNAAKDVALGVPLLTAAKKYGVPRTTLRRYIKGNDNKLKKMGPPPTLSPNEENVLVTWIASLAEAGFPVTKDTLLDSVQQLIRELKRKNEFVNDRPGRSWFNGFMKRNPSIATRVAQNLTISRALVTNDKLRKWFDEVYEYLSNKQLNNILTEPNRVFNADETAFFLNPKGMKVLAIKGDKTVYQHVNSDEKECLTVLVNANAEGELAPPLVIFKYERIPNELVSSVPANWGLGKSESGWMTGALFYEYITNVFYPWLVKQNITFPVILFIDGHTSHLTLHTSRFCRENGIIIIALLPNATHLIQPMDVSVFRSLKENWRSKVHEWRLHNIEKPILKKKDFAPLLKEVFDKKVSPNIIKSGFKKCGLVPWDPSAPAITVDAKKIEPEKISVKDLKECIKIMESYIGKDKMDIFKNDESEIQVEDKSLHDLWIKIKNDVKNGEDLQKTSSDKIDIIPSPKKTQPKMAKNSETVEELEITISSDDKENVASLLKTQAIIAENNVKESDRNSMVDLNTTPNLNGVPSPFKKSLFWPEVNQKQDKKRKKEVVPSVVTAKVWLDFHEHKAQKKKDAEELKKKRAEERLKKREEKENERKRKAEEKAKRVISKTRKPIKKPKMKFCSRNKTYSSTSEDEEIWIPSSSSAEDISVCQEESVEEIHEEKHIRGDVINKNKHFGAVMDVTKPSSSKTCSECSSNATNGVKCIACTKWYCMKCSDYYGHFDFVCMSCLTESQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -